mRNA_M-pyrifera_M_contig114518.3030.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A5A8B0Z8_9PLAN (Porin n=9 Tax=Gimesia TaxID=1649453 RepID=A0A5A8B0Z8_9PLAN) HSP 1 Score: 394 bits (1012), Expect = 1.070e-134 Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
G FQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSS+GPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSY+MQYGEPFTHTGVLGTVQIN+QLQVLAGVARGWDAWEDPNDD ELLAGIGW
Sbjct: 115 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSDGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYSMQYGEPFTHTGVLGTVQINEQLQVLAGVARGWDAWEDPNDDAELLAGIGW 304
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A517QAG9_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QAG9_9PLAN) HSP 1 Score: 368 bits (944), Expect = 2.470e-124 Identity = 168/190 (88.42%), Postives = 179/190 (94.21%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
G FQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGD+ DWGFR D+LYGTDYFYTTA GLETRSDG PHWNSSNGPR++ GYNY+MYGLA+PQLYAE YLPFLSGVS KAGHFYTPIGYE VMAP NFFYSHSYTMQYGEPFTHTG+LGTVQ+NDQLQ+LAG+ARGW+AWEDPNDD ELLAGIGW
Sbjct: 119 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDQADWGFRADMLYGTDYFYTTAFGLETRSDGQPHWNSSNGPRTANGYNYSMYGLALPQLYAEVYLPFLSGVSIKAGHFYTPIGYERVMAPDNFFYSHSYTMQYGEPFTHTGILGTVQVNDQLQLLAGIARGWNAWEDPNDDAELLAGIGW 308
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A2E2C415_9PLAN (Uncharacterized protein n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C415_9PLAN) HSP 1 Score: 352 bits (902), Expect = 4.990e-118 Identity = 162/190 (85.26%), Postives = 173/190 (91.05%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
G FQKPSNNFNLPVTFNDRSNEYQMNQLYL++ER V+FGGDE DWGFRGDLLYGTDYFYTTALGLET SDG+PHWNS NGPR+SGG YAMYGLAMPQLYAE Y+P+L GVS KAGHFYTPIGYE V AP NFFYSHSYTMQYGEPFTHTG+L T Q+ +QLQ+LAGVARGWDAWEDPNDD ELLAGIGW
Sbjct: 115 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLYMERQVNFGGDELDWGFRGDLLYGTDYFYTTALGLETESDGSPHWNSGNGPRTSGGSTYAMYGLAMPQLYAELYVPWLEGVSIKAGHFYTPIGYEKVTAPDNFFYSHSYTMQYGEPFTHTGILTTFQVTEQLQLLAGVARGWDAWEDPNDDAELLAGIGW 304
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A517RJ53_9PLAN (Uncharacterized protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RJ53_9PLAN) HSP 1 Score: 347 bits (891), Expect = 2.310e-116 Identity = 160/190 (84.21%), Postives = 171/190 (90.00%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
G FQKPSNNFNLPVTFNDRSNEYQMNQLYLF+ER VDFGGD+ DWGFR DLLYGTDYFYTTALGLET +DG+PHWNS +GPR G YAMYGLAMPQLYAE Y+P+L GVS KAGHFYTPIGYE V AP NFFYSHSYTMQYGEPFTHTG+LGT Q+N+QLQ+LAGVARGWDAWEDPNDD ELLAGIGW
Sbjct: 115 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLFMERAVDFGGDQLDWGFRADLLYGTDYFYTTALGLETHADGSPHWNSGDGPRRIGTNTYAMYGLAMPQLYAELYVPWLEGVSIKAGHFYTPIGYEKVTAPDNFFYSHSYTMQYGEPFTHTGILGTFQVNEQLQLLAGVARGWDAWEDPNDDAELLAGIGW 304
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A517VUK2_9PLAN (Uncharacterized protein n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VUK2_9PLAN) HSP 1 Score: 345 bits (884), Expect = 2.730e-115 Identity = 156/190 (82.11%), Postives = 173/190 (91.05%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
G FQKPSNNFNLPVTFNDRSNEYQMNQLYLF+ER VDFGGDE DWGFR D+LYGTDYF+TTA+GLET SDG+ HWNS+NGPR SGG +AMYG+A+PQLYAE Y+P+LSGVS KAGHFYTPIGYE V AP NFFYSHSY+MQYGEPFTHTG+L T Q++DQLQ+LAG+ARGWDAWEDPNDD ELLAGIGW
Sbjct: 116 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLFMEREVDFGGDELDWGFRADILYGTDYFFTTAIGLETNSDGSAHWNSANGPRRSGGNTFAMYGVALPQLYAELYIPWLSGVSIKAGHFYTPIGYEKVTAPDNFFYSHSYSMQYGEPFTHTGILSTFQVSDQLQLLAGIARGWDAWEDPNDDAELLAGIGW 305
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A518IFZ2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IFZ2_9PLAN) HSP 1 Score: 340 bits (871), Expect = 2.450e-113 Identity = 157/190 (82.63%), Postives = 169/190 (88.95%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
G FQKPSNNFNLPVTFNDRSNEYQMNQLYLF+ER VDFGGDE DWGFR DLLYGTDYFYTTA GLET SDG+PHWNS +GPR G YAMYGLAMPQLYAE Y+PFL GVS KAGHFYTPIGYE V AP NFFYSHSY+MQYGEPFTHTG+L T Q++++LQ+LAGVARGWDAWEDP+DD ELLAGIGW
Sbjct: 115 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLFMERAVDFGGDELDWGFRADLLYGTDYFYTTATGLETHSDGSPHWNSGDGPRRIGTNTYAMYGLAMPQLYAELYVPFLEGVSIKAGHFYTPIGYEKVTAPDNFFYSHSYSMQYGEPFTHTGMLATFQVSERLQLLAGVARGWDAWEDPSDDAELLAGIGW 304
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A350KBH4_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KBH4_9PLAN) HSP 1 Score: 322 bits (826), Expect = 1.680e-109 Identity = 148/178 (83.15%), Postives = 161/178 (90.45%), Query Frame = 1
Query: 1 GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDP 534
G FQKPSNNFNLPVTFNDRSNEYQMNQLYLF+ER V++GGDE DWGFR DLLYGTDYFYTTALGLET SDG+PHWNS+NGPR+SG YAMYGLAMPQLYAE Y+P+L GVS KAGHFYTPIGYE V AP NFFYSHSY+MQYGEPFTHTG+L T Q+ +QLQ+LAGVARGWDAWEDP
Sbjct: 88 GNFQKPSNNFNLPVTFNDRSNEYQMNQLYLFMERQVNYGGDELDWGFRADLLYGTDYFYTTALGLETESDGSPHWNSANGPRTSGSSTYAMYGLAMPQLYAELYVPWLDGVSIKAGHFYTPIGYEKVTAPDNFFYSHSYSMQYGEPFTHTGILTTFQVTEQLQLLAGVARGWDAWEDP 265
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A356ETI6_9PLAN (Porin n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A356ETI6_9PLAN) HSP 1 Score: 224 bits (571), Expect = 3.120e-68 Identity = 110/185 (59.46%), Postives = 134/185 (72.43%), Query Frame = 1
Query: 16 PSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
P + N P+TFNDR+NEYQMNQLYL + R V+ G +FD G R DLLYGTDYF+T A GLE DG P WN++ GPR+ G A+YGLAMPQLYAEFY+P+ G + K GHFY+ +G ESVMAP+NFFYSHSY+ QYGEPFT TG L + Q ++L AG+ RGWD+WEDP D L G+ W
Sbjct: 122 PDSRLNYPLTFNDRANEYQMNQLYLAMGRRVNTEGCKFDVGGRVDLLYGTDYFFTEATGLENHPDGTPRWNTT-GPRAGG--TAAIYGLAMPQLYAEFYMPWRYGTTVKVGHFYSIMGCESVMAPRNFFYSHSYSKQYGEPFTFTGFLASYQYGERLTFHAGMTRGWDSWEDPTDRPGFLGGVSW 303
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A2S8GJY2_9BACT (Porin n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GJY2_9BACT) HSP 1 Score: 218 bits (556), Expect = 7.910e-66 Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 1
Query: 7 FQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIG 567
F P++NFN P+TFNDR++EYQMNQLY+ + + VD + +G R DLLYG+DYF+TTA GLET +DG+ WN + GPR++G A+YGLAMPQ+YAE ++P +GV K GHFYT +GYESVMAP+NFFYSH+YTMQYGEPFTHTGVLGT + + L + AGV GWD + +PN G+L A +G
Sbjct: 137 FDHPASNFNTPMTFNDRADEYQMNQLYMALGKDVDDQNCCWSFGGRVDLLYGSDYFFTTARGLETYTDGSQKWNGT-GPRAAGAA--ALYGLAMPQMYAEVFVPVGNGVKVKFGHFYTIMGYESVMAPQNFFYSHAYTMQYGEPFTHTGVLGTFDMGEHLTINAGVVNGWDNFNNPN--GQLSALLG 318
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Match: A0A2G2IUK6_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2IUK6_9BACT) HSP 1 Score: 216 bits (550), Expect = 3.870e-65 Identity = 102/178 (57.30%), Postives = 125/178 (70.22%), Query Frame = 1
Query: 37 PVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDLLYGTDYFYTTALGLETRSDGAPHWNSSNGPRSSGGYNYAMYGLAMPQLYAEFYLPFLSGVSFKAGHFYTPIGYESVMAPKNFFYSHSYTMQYGEPFTHTGVLGTVQINDQLQVLAGVARGWDAWEDPNDDGELLAGIGW 570
P+ FND++NEY MNQLYLF R V G +D G R DLLYGTDY++ A GLETR D + HWNS+ GPR++G +YGLA+PQ YAE Y P+ GV+ K GHFYT +GYESVMAP+NFFYSHSY MQYGEPFTHTG+L + + L AG+ RGW+ WE PN + G+ W
Sbjct: 124 PLIFNDQANEYMMNQLYLFAGRQVCEDGCSWDLGGRVDLLYGTDYYFIQATGLETRDDNSQHWNSNTGPRNAG--TAGLYGLALPQAYAEIYSPWAGGVNVKLGHFYTTMGYESVMAPENFFYSHSYIMQYGEPFTHTGMLASWNSSSCLSWHAGITRGWNTWEQPNGQSSFIGGVDW 299 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114518.3030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114518.3030.1 >prot_M-pyrifera_M_contig114518.3030.1 ID=prot_M-pyrifera_M_contig114518.3030.1|Name=mRNA_M-pyrifera_M_contig114518.3030.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp GKFQKPSNNFNLPVTFNDRSNEYQMNQLYLFVERPVDFGGDEFDWGFRGDback to top mRNA from alignment at M-pyrifera_M_contig114518:2..571+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114518.3030.1 ID=mRNA_M-pyrifera_M_contig114518.3030.1|Name=mRNA_M-pyrifera_M_contig114518.3030.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig114518:2..571+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114518:2..571+ >mRNA_M-pyrifera_M_contig114518.3030.1 ID=mRNA_M-pyrifera_M_contig114518.3030.1|Name=mRNA_M-pyrifera_M_contig114518.3030.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig114518:2..571+ (Macrocystis pyrifera P11B4 male)back to top |