mRNA_M-pyrifera_M_contig114514.3028.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig114514.3028.1
Unique NamemRNA_M-pyrifera_M_contig114514.3028.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: UPI000C1CE9F7 (non-specific phospholipase C2 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE9F7)

HSP 1 Score: 91.3 bits (225), Expect = 1.540e-19
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D  A P  GVPSPDG+    P  F FDRLG+R+PTI+VSPW++   VVHGP  +  PTPTS Y  SS  AT+R +FN+S P
Sbjct:  308 EHGGFYDHVATPVNGVPSPDGIVGPEPFLFKFDRLGVRVPTIMVSPWIQKGTVVHGP--NGSPTPTSEYEHSSIPATVRKIFNLSSP 392
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BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A835UAQ9_VANPL (Uncharacterized protein n=3 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UAQ9_VANPL)

HSP 1 Score: 90.9 bits (224), Expect = 2.120e-19
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D    P  GVP+PDG+   +P+ F FDRLG+R+PTI+VSPW+E   VVHGP  +  PTPTS Y  SS  AT++ +FN+  P
Sbjct:  310 EHGGFYDHVPTPVRGVPNPDGILGPSPSKFNFDRLGVRVPTIMVSPWIEKGTVVHGP--NGSPTPTSEYEHSSITATMKKIFNLPSP 394
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BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A6I9TI14_SESIN (non-specific phospholipase C2 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TI14_SESIN)

HSP 1 Score: 90.1 bits (222), Expect = 3.750e-19
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLE-SQVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D  A P+ GVPSPDG+    P  F FDRLG+R+PTI+VSPW++ + VVHGP  +  P+PTS Y  SS  AT+R +FN+S P
Sbjct:  287 EHGGFYDHVATPNHGVPSPDGIVGPDPFFFKFDRLGVRVPTIVVSPWVQKATVVHGP--NGSPSPTSEYEHSSIPATVRKIFNLSSP 371
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BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: M5X0M9_PRUPE (Uncharacterized protein n=11 Tax=Prunus TaxID=3754 RepID=M5X0M9_PRUPE)

HSP 1 Score: 89.7 bits (221), Expect = 5.380e-19
Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQPLSHR 270
            EHGGF D  A P  GVPSPDG+    P  F FDRLG+R+PTI+VSPW+E   V+HGP  +  P PTS +  SS  AT+R +FN+S PL+ R
Sbjct:  305 EHGGFYDHVATPVHGVPSPDGIVGPEPFLFQFDRLGVRVPTIMVSPWIEKGTVLHGP--NGSPFPTSEFEHSSIPATVRKIFNLSAPLTKR 393
[Close]
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A151SBZ5_CAJCA (Uncharacterized protein (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SBZ5_CAJCA)

HSP 1 Score: 84.3 bits (207), Expect = 8.130e-19
Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQPLSHR 270
            EHGGF D    P  GVPSPDG+    P  F FDRLG+R+PTI +SPW+E   VVHGP  +  P+PTS Y  SS  AT++ LFN+   L+ R
Sbjct:    6 EHGGFFDHVPTPVRGVPSPDGIVGPEPFNFTFDRLGVRVPTIAISPWIEKGTVVHGP--NGSPSPTSEYEHSSIPATVKKLFNLPSFLTKR 94
[Close]
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A218W8L8_PUNGR (Uncharacterized protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218W8L8_PUNGR)

HSP 1 Score: 89.0 bits (219), Expect = 9.780e-19
Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D  A P  GVPSPDG+    P  F FDRLG+R+PTI+VSPW+E   VVHGP  +  P PTS Y  SS  AT++ LFN+S P
Sbjct:  290 EHGGFFDHVATPVHGVPSPDGIVGPVPFFFRFDRLGVRVPTIVVSPWIEKGTVVHGP--NGSPYPTSEYEHSSIPATVKKLFNLSSP 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A803M4F0_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803M4F0_CHEQI)

HSP 1 Score: 89.0 bits (219), Expect = 1.000e-18
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLE-SQVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQPLSHR 270
            EHGGF D    P EGVPSPDG+    P  FGFDRLG+R+PTI++SPW+E   V+HGP     P PTS Y  SS  AT++ +FN+ + L+ R
Sbjct:  298 EHGGFYDHVPTPVEGVPSPDGIVGPQPYSFGFDRLGVRVPTIMISPWIEPGTVLHGPSG---PHPTSEYEHSSIPATVKKIFNLKEFLTKR 385
[Close]
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A834Z1Q8_9MAGN (Uncharacterized protein n=2 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z1Q8_9MAGN)

HSP 1 Score: 89.0 bits (219), Expect = 1.010e-18
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D    P  GVPSPDG+    P  FGFDRLG+R+PTI+VSPW+E   VVHGP  +  P PTS +  SS  AT++ LFN+S P
Sbjct:  305 EHGGFFDHVPTPVSGVPSPDGIVGPEPFLFGFDRLGVRVPTIMVSPWIEKGTVVHGP--NGSPFPTSEFEHSSIPATVKKLFNLSSP 389
[Close]
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A5C7IY88_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7IY88_9ROSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.370e-18
Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLE-SQVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D  A P  GVPSPD +    P  F FDRLG+R+PTI+VSPW+E S VVHGP  + +P PTS Y  SS  AT++ +FN+S P
Sbjct:  303 EHGGFFDHVATPVSGVPSPDDIVGPDPFLFKFDRLGVRVPTIMVSPWIEKSTVVHGP--NGKPFPTSEYEHSSIPATVKKIFNMSSP 387
[Close]
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Match: A0A835S7P1_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835S7P1_VANPL)

HSP 1 Score: 88.6 bits (218), Expect = 1.380e-18
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:    1 EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES-QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQP 258
            EHGGF D  A P  G+PSPDG+    P  F F+RLG+R+PTI+VSPW+E   VVHGP  +  PTPTS Y  SS  AT++ +FN+  P
Sbjct:  305 EHGGFYDHVATPVNGIPSPDGIVGPNPFNFNFNRLGVRVPTIMVSPWIEKGTVVHGP--NGSPTPTSEYEHSSIPATVKKIFNLPSP 389
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114514.3028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C1CE9F71.540e-1957.47non-specific phospholipase C2 n=1 Tax=Olea europae... [more]
A0A835UAQ9_VANPL2.120e-1954.02Uncharacterized protein n=3 Tax=Vanilla planifolia... [more]
A0A6I9TI14_SESIN3.750e-1956.32non-specific phospholipase C2 n=1 Tax=Sesamum indi... [more]
M5X0M9_PRUPE5.380e-1954.95Uncharacterized protein n=11 Tax=Prunus TaxID=3754... [more]
A0A151SBZ5_CAJCA8.130e-1952.75Uncharacterized protein (Fragment) n=1 Tax=Cajanus... [more]
A0A218W8L8_PUNGR9.780e-1957.47Uncharacterized protein n=2 Tax=Punica granatum Ta... [more]
A0A803M4F0_CHEQI1.000e-1852.75Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A834Z1Q8_9MAGN1.010e-1856.32Uncharacterized protein n=2 Tax=Tetracentron sinen... [more]
A0A5C7IY88_9ROSI1.370e-1856.32Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
A0A835S7P1_VANPL1.380e-1854.02Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114514contigM-pyrifera_M_contig114514:1..270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score92.8
Seed ortholog evalue8.7e-17
Seed eggNOG ortholog102107.XP_008227281.1
KEGG rclassRC00017,RC00425
KEGG koko:K01114
KEGG ReactionR01312,R02027,R02052,R03332,R07381
KEGG Pathwayko00562,ko00564,ko00565,ko01100,ko01110,ko02024,ko04919,map00562,map00564,map00565,map01100,map01110,map02024,map04919
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003993,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046434,GO:0071704,GO:1901575
EggNOG free text desc.Phosphoesterase family
EggNOG OGs2QPJ0@2759,37S0T@33090,3GBCP@35493,4JIYS@91835,COG3511@1
EC3.1.4.3
COG Functional cat.M
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02042
Exons1
Model size270
Cds size270
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815661.6065605-CDS-M-pyrifera_M_contig114514:0..2701622815661.6065605-CDS-M-pyrifera_M_contig114514:0..270Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114514 1..270 -
1692277510.0161107-CDS-M-pyrifera_M_contig114514:0..2701692277510.0161107-CDS-M-pyrifera_M_contig114514:0..270Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114514 1..270 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114514.3028.1prot_M-pyrifera_M_contig114514.3028.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig114514 1..270 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig114514.3028.1

>prot_M-pyrifera_M_contig114514.3028.1 ID=prot_M-pyrifera_M_contig114514.3028.1|Name=mRNA_M-pyrifera_M_contig114514.3028.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
EHGGFADLKAPPSEGVPSPDGLNCTTPAPFGFDRLGLRIPTILVSPWLES
QVVHGPPAHMRPTPTSAYSASSSIATLRSLFNVSQPLSHR
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mRNA from alignment at M-pyrifera_M_contig114514:1..270-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig114514.3028.1 ID=mRNA_M-pyrifera_M_contig114514.3028.1|Name=mRNA_M-pyrifera_M_contig114514.3028.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig114514:1..270- (Macrocystis pyrifera P11B4 male)
GAGCACGGTGGGTTTGCGGATTTGAAGGCTCCTCCTTCGGAGGGGGTTCC
TAGTCCTGACGGATTGAACTGCACGACTCCTGCTCCGTTTGGGTTCGATC
GTTTGGGGTTGCGCATTCCTACGATTCTGGTGAGTCCGTGGTTGGAGTCG
CAGGTAGTGCATGGTCCCCCAGCGCACATGCGTCCGACTCCAACATCGGC
CTACTCTGCCTCTTCCTCCATTGCGACCTTGCGATCGCTCTTCAACGTCT
CCCAGCCCCTCTCCCATCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig114514:1..270-

>mRNA_M-pyrifera_M_contig114514.3028.1 ID=mRNA_M-pyrifera_M_contig114514.3028.1|Name=mRNA_M-pyrifera_M_contig114514.3028.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig114514:1..270- (Macrocystis pyrifera P11B4 male)
GAGCACGGTGGGTTTGCGGATTTGAAGGCTCCTCCTTCGGAGGGGGTTCC
TAGTCCTGACGGATTGAACTGCACGACTCCTGCTCCGTTTGGGTTCGATC
GTTTGGGGTTGCGCATTCCTACGATTCTGGTGAGTCCGTGGTTGGAGTCG
CAGGTAGTGCATGGTCCCCCAGCGCACATGCGTCCGACTCCAACATCGGC
CTACTCTGCCTCTTCCTCCATTGCGACCTTGCGATCGCTCTTCAACGTCT
CCCAGCCCCTCTCCCATCGTGAGCACGGTGGGTTTGCGGATTTGAAGGCT
CCTCCTTCGGAGGGGGTTCCTAGTCCTGACGGATTGAACTGCACGACTCC
TGCTCCGTTTGGGTTCGATCGTTTGGGGTTGCGCATTCCTACGATTCTGG
TGAGTCCGTGGTTGGAGTCGCAGGTAGTGCATGGTCCCCCAGCGCACATG
CGTCCGACTCCAACATCGGCCTACTCTGCCTCTTCCTCCATTGCGACCTT
GCGATCGCTCTTCAACGTCTCCCAGCCCCTCTCCCATCGT
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