mRNA_M-pyrifera_M_contig114493.3018.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A5A8DR30_CAFRO (Tr-type G domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DR30_CAFRO) HSP 1 Score: 195 bits (495), Expect = 3.490e-56 Identity = 95/152 (62.50%), Postives = 122/152 (80.26%), Query Frame = 1
Query: 22 RQKHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTLPER 477
RQK W+ V A++ K +T LDLCGHEKYLKTT+FGLTGM+PDY +VVVGANMG+SKMT+EH+GIAAALRLPI V +TK+D+AP + +KT+ SV +TL+ RMP+ +RS +QV AAK MA+G++AP ICVS+V+ EG +LR LLR L R
Sbjct: 149 RQKLWRDVRARSHKAITFLDLCGHEKYLKTTVFGLTGMLPDYGMVVVGANMGVSKMTKEHMGIAAALRLPIVVVITKIDLAPERVFEKTVKSVTKTLKAIRRMPHPLRSLDQVPAAAKGMASGKVAPFICVSNVTGEGQDVLRELLRVLEPR 300
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A812XV99_9DINO (GTPBP1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XV99_9DINO) HSP 1 Score: 190 bits (482), Expect = 1.600e-53 Identity = 92/152 (60.53%), Postives = 121/152 (79.61%), Query Frame = 1
Query: 22 RQKHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTLPER 477
R K +QT+ A++ +++T +DLCGHEKYLKTTIFGLTGM+PDY LVVVG NMG+S+MTREH+GIAAALR+P+ VAVTKVD+AP G++ KTL SV + L+ A +MPYLVR+ + V AA + R+ PV VS+VS +G+ +LR+LLR LP R
Sbjct: 309 RAKVFQTIKAESDRSITFIDLCGHEKYLKTTIFGLTGMMPDYGLVVVGGNMGVSRMTREHVGIAAALRVPLIVAVTKVDLAPAGVLKKTLASVNKLLKAARKMPYLVRTEDNVNKAASTILTARITPVFLVSNVSGQGLDMLRSLLRRLPHR 460
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A7R9UAM3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM3_9STRA) HSP 1 Score: 167 bits (422), Expect = 8.180e-46 Identity = 78/141 (55.32%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 28 KHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLR 450
+ W V +A ++VTL+DLCGHEKYLKTT+FGLTGM PD+C+VVVGANMG+ +MTREHI IA AL +P+ V VTK+DIAP ++ +T ++ + LR G+MPY V+ + QV AA+++A+ R+ PV +SSV+ G+PLLR
Sbjct: 223 QRWAQVVKEADRSVTLIDLCGHEKYLKTTVFGLTGMCPDFCIVVVGANMGVQRMTREHISIACALSIPLVVCVTKIDIAPQPVLKQTRRTLAKFLRACGKMPYPVKESSQVEAAAQSVASDRITPVFAISSVTGLGLPLLR 363
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: F0Y7C9_AURAN (Tr-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C9_AURAN) HSP 1 Score: 161 bits (408), Expect = 5.800e-45 Identity = 80/147 (54.42%), Postives = 106/147 (72.11%), Query Frame = 1
Query: 28 KHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTL 468
+ W+ V + V+L+DLCGHE+YLKTT+FGLT M+PD+ L+VVGANMG+ +MTREHI IA AL LPI V VTKVDI PP ++ +T ++ R LR GRMP V+ +Q+A AA++ AGR+APV VSSV +G+ LL+ L L
Sbjct: 77 QRWKEVVDACDRNVSLIDLCGHERYLKTTVFGLTAMLPDFALLVVGANMGVQRMTREHISIAVALSLPIAVVVTKVDICPPDVLKQTRQTLARCLRHHGRMPMPVKERDQLANAAESAGAGRVAPVFAVSSVKGDGLDLLKGFLGLL 223
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A7S3HE85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE85_9STRA) HSP 1 Score: 161 bits (407), Expect = 9.200e-45 Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 34 WQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTL 468
W V K+ +VTL+DLCGHEKYLKTT+FGLTG++PDYC++VVG+NMG+ MTREHI IA AL LP+FVAVTKVDI P I+ T ++ + LR G+MP+ V+ V TAA ++ + R+ PV +SSV+ +G+ LL+A + T+
Sbjct: 139 WAEVMEKSDHSVTLIDLCGHEKYLKTTLFGLTGLMPDYCMLVVGSNMGVQVMTREHISIACALNLPMFVAVTKVDICPENILKTTRTALAKLLRAHGKMPFPVKDLAGVQTAADSLCSDRITPVFTLSSVTGQGVDLLKAFVATV 283
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A6V2X5T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X5T2_HETAK) HSP 1 Score: 160 bits (405), Expect = 5.670e-44 Identity = 78/147 (53.06%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 28 KHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTL 468
K W V + +++TL+DLCGHE+YLKTT+FGLTGM+PD+ +VVVG NMG+ MTREHI IAAAL +P+ VAVTKVDIAP ++ +T ++ + LRK G++PY VR A+Q A AA ++ + R+ PV +S+V+ +G+ LLR L L
Sbjct: 130 KRWAEVVRNSERSLTLIDLCGHERYLKTTVFGLTGMLPDFTVVVVGGNMGVQLMTREHISIAAALAIPMAVAVTKVDIAPVPVLKQTRQTLAKFLRKHGKLPYPVRDADQAAAAADSICSDRVTPVFAISNVTGQGLDLLRLFLSKL 276
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A812UTX0_SYMMI (GTPBP1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTX0_SYMMI) HSP 1 Score: 157 bits (398), Expect = 2.200e-43 Identity = 71/147 (48.30%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 28 KHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTL 468
+ W ++ ++ +T+TL+DLCGHEKYLKTT+FGLTG++PD+ ++VG+NMG+ MTREHI I+ AL LP+FVAV+KVDI PP ++ T ++ + LR G+MP+ V+ + AA A+A+ R+ PV +S+V+ +G+ LL+A L L
Sbjct: 69 QRWVEINERSERTLTLIDLCGHEKYLKTTLFGLTGLMPDFAFLIVGSNMGVQMMTREHISISCALNLPMFVAVSKVDICPPNVLQNTRRTLAKILRSYGKMPHPVKDMDSAVIAAAAIASNRITPVFTISNVTGQGVDLLKAFLSRL 215
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A812ZE13_9DINO (GTPBP1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812ZE13_9DINO) HSP 1 Score: 157 bits (396), Expect = 7.640e-43 Identity = 74/161 (45.96%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 1 GGSKSVSRQKHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAG--RMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTLPER 477
G S + SR + WQ V +++ + VT DLCGHEKYLKTTIFGL G PDY +++V AN G +M+REH+GIA ALR+P F+ +TK+DIAP + D+ L + + ++ R P +V S +Q+ AA + ++ P+ C+S+V+ EG+PLLR+ L+ LP R
Sbjct: 141 GTSTASSRNQTWQQVVSQSERLVTFSDLCGHEKYLKTTIFGLVGQCPDYTMIIVNANAGFQRMSREHLGIALALRIPFFIVITKIDIAPQNVFDENLAQLHKIVKSNAVKRQPLVVTSDDQLEQAASGIYGKQVCPMFCISNVTGEGLPLLRSFLQRLPSR 301
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A7S2WNE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE9_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.750e-42 Identity = 79/164 (48.17%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 4 GSKSVSRQKH----WQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTLPERTR 483
G + V + +H W + + + ++L+DLCGHE+YLKTT+FGLTGM+PD+ L+VVGANMG+ +MTREHI IA AL+LPI V VTKVDI P ++ +T + + LR +MPY V+ +QV AA A+A+ R+ PV +SSV+ +G+ LL+A L L +R
Sbjct: 101 GEQVVPQARHHHQRWTEIVENSDRAISLIDLCGHERYLKTTVFGLTGMMPDFALLVVGANMGVQRMTREHISIACALQLPIAVVVTKVDICPQPVLKQTRQDLAKYLRSNRKMPYPVKQLDQVDAAADAVASDRITPVFAISSVTGQGLELLKAFLARLRRNSR 264
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Match: A0A6H5JA57_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA57_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.800e-42 Identity = 76/150 (50.67%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 19 SRQKHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCLVVVGANMGLSKMTREHIGIAAALRLPIFVAVTKVDIAPPGIMDKTLGSVQRTLRKAGRMPYLVRSAEQVATAAKAMAAGRLAPVICVSSVSSEGMPLLRALLRTL 468
S + W V + ++VTL+DLCGHEKYLKTT+FGLTG++PD+CL+VVGANMG+ +MT+EHI IA AL++PI V VTKVDI PP ++ +T ++ + LR+ +MPY ++ + AA+++A+ R+ PV VS+V+ G+PLLRA + L
Sbjct: 176 SHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVD---AAAESIASDRITPVFAVSNVTGMGLPLLRAFVARL 322 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114493.3018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114493.3018.1 >prot_M-pyrifera_M_contig114493.3018.1 ID=prot_M-pyrifera_M_contig114493.3018.1|Name=mRNA_M-pyrifera_M_contig114493.3018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp GGSKSVSRQKHWQTVHAKACKTVTLLDLCGHEKYLKTTIFGLTGMVPDYCback to top mRNA from alignment at M-pyrifera_M_contig114493:5..499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114493.3018.1 ID=mRNA_M-pyrifera_M_contig114493.3018.1|Name=mRNA_M-pyrifera_M_contig114493.3018.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig114493:5..499+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114493:5..499+ >mRNA_M-pyrifera_M_contig114493.3018.1 ID=mRNA_M-pyrifera_M_contig114493.3018.1|Name=mRNA_M-pyrifera_M_contig114493.3018.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig114493:5..499+ (Macrocystis pyrifera P11B4 male)back to top |