mRNA_M-pyrifera_M_contig114483.3016.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig114483.3016.1
Unique NamemRNA_M-pyrifera_M_contig114483.3016.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A0S4ITL6_BODSA (Monoglyceride lipase, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4ITL6_BODSA)

HSP 1 Score: 103 bits (258), Expect = 7.090e-24
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 1
Query:    1 GLWLHYEKRVPRDAVAVAVF-VGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPR 447
            G+WL + +  PR A    VF V G   H   Y  L   L +    V + DHQG+GGSEG+R + ERF   VDD    V  ++     +S LP+FL+G SMGG +SV LA RD   W+G++     L    + A P+    A   S+FLP+
Sbjct:   54 GIWLRWTEWSPRAAPTAVVFIVSGRGEHAGRYDSLAYTLTAEGYQVFSMDHQGQGGSEGDRSYVERFQDYVDDTQAFVKRIMTLRYGLSQLPKFLIGHSMGGLISVHLALRDQTFWNGIILSAPALEADPKVATPFMKAAASLLSDFLPK 203          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A836KI77_9TRYP (Hydrolase_4 domain-containing protein n=4 Tax=Mundinia TaxID=2249475 RepID=A0A836KI77_9TRYP)

HSP 1 Score: 84.3 bits (207), Expect = 1.370e-16
Identity = 58/164 (35.37%), Postives = 77/164 (46.95%), Query Frame = 1
Query:    1 GLWLHYEKRVPRD---------AVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLV---PLGGMLAPTAEFAAPWKLRLAEAFSEFLPRFPV 456
             LWLH+ +  P              V   V G   H   Y  +   L      V + D+QG GGSEGER + ERFSH VDD+   +  +     ++  LP FL+G SMGG +SV +AQRDA    G+V   P  G+  P + F       L    S +LP+ PV
Sbjct:   35 NLWLHFSEWWPHGDGGVTPAPPTKGVVFIVPGLGEHTGRYDSVALRLNQEGYVVFSMDNQGSGGSEGERLYVERFSHFVDDICVFIEFIQQRYDALRSLPTFLMGHSMGGLISVLVAQRDAGGLRGVVLSGPALGLSKPVSGFMRS----LGHFLSAWLPKLPV 194          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A0H5R4R9_9EUKA (Hydrolase_4 domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4R9_9EUKA)

HSP 1 Score: 84.0 bits (206), Expect = 2.390e-16
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 1
Query:    1 GLWLHYEKRVPRDAVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGS-DASISGLPRFLVGVSMGGTVSVSLAQRDARAW-SGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPRFPV 456
            G WL+ ++    + VA+     G   HI  Y  +  +      +V   DHQG G S G   + ERF  ++DD    +   + S   +I+GLP+FL+G SMGG +++  A R  + +  G+V    ML      A P K+ +A+  S++LP+ PV
Sbjct:   56 GHWLYTKQWSVPNPVAILFISHGLGDHILRYEHVARYFNLHNFSVFGVDHQGHGQSHGTEMYVERFDDIIDDYLMFIEKTMASLPTAIAGLPKFLLGHSMGGAIAIHTAMRSQKGFFDGVVLSSPMLKADPATATPMKIYIAKLLSKYLPKLPV 209          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A0M9FZA7_9TRYP (Putative monoglyceride lipase n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9FZA7_9TRYP)

HSP 1 Score: 82.0 bits (201), Expect = 9.900e-16
Identity = 55/156 (35.26%), Postives = 76/156 (48.72%), Query Frame = 1
Query:    7 WLHYEKRV---PRDAVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGGMLA---PTAEFAAPWKLRLAEAFSEFLPRFPV 456
            W H + R    P     V   V G   H   Y  +   L        + D+QG GGSEGER + ERF + VDDV   V  +     ++ GLP FL+G SMGG +SV +AQRD   + G+V  G  L+   P   F  P    L   F++++P+ P+
Sbjct:   44 WPHGDGRPATHPAALKGVVFVVPGLGEHTGRYDSVALRLNREGYVAFSMDNQGAGGSEGERLYVERFEYFVDDVCAFVRFVQQRYPALKGLPTFLLGHSMGGLISVRVAQRDPSPFRGVVLSGPALSLTNPPPSFVLP----LGSFFAQWVPKLPI 195          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: W6LCS6_9TRYP (Hydrolase_4 domain-containing protein n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6LCS6_9TRYP)

HSP 1 Score: 72.4 bits (176), Expect = 3.300e-12
Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 1
Query:    1 GLWLHYEK---RVPRDAVAVAVFV-GGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGG 369
             LWL + +   RVP   V   VF+  G   H + Y  +   L     A  + D+ G GGSEG R + ERF H VDD++  +A ++     + GLPR L+G SMGG +    A R    +   V L G
Sbjct:   36 NLWLRFTEWWPRVPSSEVKYVVFIISGLGEHANRYDSIAVRLNREGAACFSLDNVGSGGSEGCRLYVERFDHFVDDIEDFMAGILERYPELKGLPRVLLGHSMGGLIGFFTAVRAPAGFFDAVILSG 162          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A7S2DTE7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DTE7_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 4.030e-12
Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 1
Query:   91 YRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASI----SGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGGMLAPTAEFAAP---WKLRLAEAFSEFLPRFPV 456
            Y  + + L+ A   VVA DHQGRG SEGERG+F RF H+V D       L  +DA++      LP FL+G SMGG +++++A R  R W G++    + AP      P     LRL +  S+ +P+  V
Sbjct:    3 YEHVAERLSRAGFNVVALDHQGRGRSEGERGYFPRFEHVVSDC------LRCADATLPTSSDALPAFLLGHSMGGLLALNVAARSQR-WRGVL----VSAPALRVQKPPTAAALRLYQLLSKHVPKLEV 120          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A158H108_9BURK (Hydrolase n=2 Tax=Caballeronia TaxID=1827195 RepID=A0A158H108_9BURK)

HSP 1 Score: 70.5 bits (171), Expect = 1.350e-11
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 1
Query:    4 LWLHYEKRVPRDAVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVS-VSLAQRDA-RAWSGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPRFP 453
            L+LH  + V +    +A+ V G A H   Y      L +A V ++A D +G G S G R W +RF   + D D +V   V    + +G+P FL+G SMGGT++ + +A+R A R  +GL+     L P  +    W+L L +      PR P
Sbjct:   15 LFLHRWQAVGKPLARIAL-VHGLAEHAQRYDAFAQPLNAAGVELIAVDLRGHGRSSGARVWIDRFDDYLLDADVLVE--VAETTAPAGVPLFLMGHSMGGTIAALYVAERAAERKLAGLILSSAALKPGRDVPR-WQLALGKIIGAISPRLP 162          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A7V6D404_9CHLR (Alpha/beta hydrolase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V6D404_9CHLR)

HSP 1 Score: 68.9 bits (167), Expect = 4.550e-11
Identity = 46/150 (30.67%), Postives = 69/150 (46.00%), Query Frame = 1
Query:    1 GLWLHYEKRVPRDAVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPRF 450
            G+ + Y+   P    AV     G   H   Y+ + D+L     A+ A DH+G G S G RG  + FS  +DD+  ++A     +    GLP FL+G S+GGT++++ A    +   G++     L    E   P KL L    S   P F
Sbjct:   13 GVRIWYQVWRPEAPKAVIALAHGLGEHSGRYKNVVDWLVPRGYAIYAPDHRGHGRSGGRRGHVDHFSDYLDDLQQLIALAAEHEP---GLPLFLLGHSLGGTIALAYAIERPQGLKGVIASSPGLRRRFE-VPPVKLFLGNLMSRIWPTF 158          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A3B0R5E8_9ZZZZ (Lysophospholipase Monoglyceride lipase putative n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0R5E8_9ZZZZ)

HSP 1 Score: 68.9 bits (167), Expect = 4.720e-11
Identity = 46/153 (30.07%), Postives = 76/153 (49.67%), Query Frame = 1
Query:    1 GLWLHYEKRVPR-DAVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPRFPV 456
            G  L+ +  +P  D  AV + + G+  H   Y+   +   +   AV A DH G G SEG+ G+   FS   D VD ++ +L  +    +GLPR LVG S+GG +S +   ++   ++  V L G     A+  + +   ++   S+FLP+  V
Sbjct:   10 GAELYRQSWLPEGDPKAVIILIHGYDEHSGRYQYFAEHCTNRGFAVHALDHWGHGKSEGDNGFVPEFSVYHDGVDKLIGELTPAH---TGLPRILVGHSLGGLISATYLLKNQAQFAAAV-LSGPAIKAADEPSVFLKFISRLLSKFLPKMGV 158          
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Match: A0A1F8PHT5_9CHLR (Hydrolase_4 domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_16_50_9 TaxID=1797643 RepID=A0A1F8PHT5_9CHLR)

HSP 1 Score: 67.4 bits (163), Expect = 1.660e-10
Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 1
Query:   10 LHYEKRVPRDAV-AVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADHQGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMGGTVSVSLAQRDARAWSGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPR 447
            L+Y+  +P D   A+ V V G A H   Y  L + L     AV + D +G G S+G +G+ +RFS  VDD+D +   LV S      +  FLVG S+GGTV+ +        + GL+ L G L  T    A   +  A   S  LP+
Sbjct:   16 LYYQCWLPADEPRAILVVVHGLADHSGRYSNLMNHLVPRGYAVYSFDQRGHGKSDGVKGYVDRFSSFVDDLD-IFFRLVRSRHP--DVKTFLVGHSVGGTVAAAYTILHQDEFDGLI-LSGALLGTPHDVAAGTILAARILSRILPK 158          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114483.3016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S4ITL6_BODSA7.090e-2438.67Monoglyceride lipase, putative n=1 Tax=Bodo saltan... [more]
A0A836KI77_9TRYP1.370e-1635.37Hydrolase_4 domain-containing protein n=4 Tax=Mund... [more]
A0A0H5R4R9_9EUKA2.390e-1631.82Hydrolase_4 domain-containing protein n=1 Tax=Spon... [more]
A0A0M9FZA7_9TRYP9.900e-1635.26Putative monoglyceride lipase n=1 Tax=Leptomonas p... [more]
W6LCS6_9TRYP3.300e-1235.43Hydrolase_4 domain-containing protein n=1 Tax=Phyt... [more]
A0A7S2DTE7_9EUKA4.030e-1238.76Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A158H108_9BURK1.350e-1133.55Hydrolase n=2 Tax=Caballeronia TaxID=1827195 RepID... [more]
A0A7V6D404_9CHLR4.550e-1130.67Alpha/beta hydrolase n=1 Tax=Anaerolineae bacteriu... [more]
A0A3B0R5E8_9ZZZZ4.720e-1130.07Lysophospholipase Monoglyceride lipase putative n=... [more]
A0A1F8PHT5_9CHLR1.660e-1034.69Hydrolase_4 domain-containing protein n=1 Tax=Chlo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114483contigM-pyrifera_M_contig114483:38..493 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.4
Seed ortholog evalue6.2e-15
Seed eggNOG ortholog5671.XP_001467408.1
KEGG rclassRC00020,RC00041
KEGG koko:K01054
KEGG ReactionR01351
KEGG Pathwayko00561,ko01100,ko04714,ko04723,ko04923,map00561,map01100,map04714,map04723,map04923
KEGG ModuleM00098
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Monoglyceride lipase
EggNOG OGs3XU3A@5653,COG2267@1,KOG1455@2759
EC3.1.1.23
COG Functional cat.I
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Exons1
Model size456
Cds size456
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815661.0223024-CDS-M-pyrifera_M_contig114483:37..4931622815661.0223024-CDS-M-pyrifera_M_contig114483:37..493Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114483 38..493 +
1692277509.7969713-CDS-M-pyrifera_M_contig114483:37..4931692277509.7969713-CDS-M-pyrifera_M_contig114483:37..493Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114483 38..493 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114483.3016.1prot_M-pyrifera_M_contig114483.3016.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig114483 38..493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig114483.3016.1

>prot_M-pyrifera_M_contig114483.3016.1 ID=prot_M-pyrifera_M_contig114483.3016.1|Name=mRNA_M-pyrifera_M_contig114483.3016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
GLWLHYEKRVPRDAVAVAVFVGGFAGHIDEYRLLFDFLASARVAVVAADH
QGRGGSEGERGWFERFSHLVDDVDGVVADLVGSDASISGLPRFLVGVSMG
GTVSVSLAQRDARAWSGLVPLGGMLAPTAEFAAPWKLRLAEAFSEFLPRF
PV
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mRNA from alignment at M-pyrifera_M_contig114483:38..493+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig114483.3016.1 ID=mRNA_M-pyrifera_M_contig114483.3016.1|Name=mRNA_M-pyrifera_M_contig114483.3016.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig114483:38..493+ (Macrocystis pyrifera P11B4 male)
GGCCTGTGGCTGCACTACGAGAAGCGCGTGCCGCGTGATGCGGTTGCGGT GGCGGTATTCGTTGGGGGATTCGCGGGCCACATCGACGAGTACCGGCTTT TGTTCGATTTCCTGGCTTCTGCGCGCGTGGCGGTGGTCGCGGCCGACCAC CAGGGCCGCGGGGGCAGCGAGGGGGAGCGCGGGTGGTTCGAGCGGTTTTC GCACCTGGTGGATGACGTGGACGGCGTGGTGGCGGATTTGGTGGGATCTG ACGCGTCGATTTCGGGCCTCCCCAGGTTTCTGGTCGGGGTGTCGATGGGC GGCACGGTGTCGGTGAGTCTGGCGCAGCGCGACGCACGTGCGTGGAGCGG CCTGGTGCCGCTGGGAGGCATGCTGGCTCCAACTGCCGAGTTTGCGGCCC CTTGGAAATTGCGGCTCGCTGAGGCATTTTCCGAGTTTTTGCCCCGTTTC CCCGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig114483:38..493+

>mRNA_M-pyrifera_M_contig114483.3016.1 ID=mRNA_M-pyrifera_M_contig114483.3016.1|Name=mRNA_M-pyrifera_M_contig114483.3016.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig114483:38..493+ (Macrocystis pyrifera P11B4 male)
GGCCTGTGGCTGCACTACGAGAAGCGCGTGCCGCGTGATGCGGTTGCGGT
GGCGGTATTCGTTGGGGGATTCGCGGGCCACATCGACGAGTACCGGCTTT
TGTTCGATTTCCTGGCTTCTGCGCGCGTGGCGGTGGTCGCGGCCGACCAC
CAGGGCCGCGGGGGCAGCGAGGGGGAGCGCGGGTGGTTCGAGCGGTTTTC
GCACCTGGTGGATGACGTGGACGGCGTGGTGGCGGATTTGGTGGGATCTG
ACGCGTCGATTTCGGGCCTCCCCAGGTTTCTGGTCGGGGTGTCGATGGGC
GGCACGGTGTCGGTGAGTCTGGCGCAGCGCGACGCACGTGCGTGGAGCGG
CCTGGTGCCGCTGGGAGGCATGCTGGCTCCAACTGCCGAGTTTGCGGCCC
CTTGGAAATTGCGGCTCGCTGAGGCATTTTCCGAGTTTTTGCCCCGTTTC
CCCGTCGGCCTGTGGCTGCACTACGAGAAGCGCGTGCCGCGTGATGCGGT
TGCGGTGGCGGTATTCGTTGGGGGATTCGCGGGCCACATCGACGAGTACC
GGCTTTTGTTCGATTTCCTGGCTTCTGCGCGCGTGGCGGTGGTCGCGGCC
GACCACCAGGGCCGCGGGGGCAGCGAGGGGGAGCGCGGGTGGTTCGAGCG
GTTTTCGCACCTGGTGGATGACGTGGACGGCGTGGTGGCGGATTTGGTGG
GATCTGACGCGTCGATTTCGGGCCTCCCCAGGTTTCTGGTCGGGGTGTCG
ATGGGCGGCACGGTGTCGGTGAGTCTGGCGCAGCGCGACGCACGTGCGTG
GAGCGGCCTGGTGCCGCTGGGAGGCATGCTGGCTCCAACTGCCGAGTTTG
CGGCCCCTTGGAAATTGCGGCTCGCTGAGGCATTTTCCGAGTTTTTGCCC
CGTTTCCCCGTC
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