mRNA_M-pyrifera_M_contig114343.2995.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A3B9DH78_9PROT (Methylmalonyl-CoA carboxyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9DH78_9PROT) HSP 1 Score: 285 bits (728), Expect = 2.380e-91 Identity = 143/191 (74.87%), Postives = 160/191 (83.77%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVEGS-YQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THAAKICK+MD+A+ VG PVIGLNDSGGARIQEG+ SL GYAEVFQRNV ASGVVPQIS++MGPCAGGAVYSPA+TDF FMVEGS Y FVTGP VVKTVT+ED+T+EELGGA HT SGVAHG+FAND+E LL R LF YLPLSNREAPP LPS DP +R L G IP +PN PYDM+ V+ EIVD+
Sbjct: 103 THAAKICKIMDQAMKVGVPVIGLNDSGGARIQEGVASLGGYAEVFQRNVLASGVVPQISLVMGPCAGGAVYSPAITDFIFMVEGSSYMFVTGPDVVKTVTHEDLTAEELGGASQHTKTSGVAHGSFANDLEMLLGTRALFSYLPLSNREAPPELPSLDPVDRPSAALDGIIPANPNTPYDMKHVVAEIVDD 293
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A812Z5R2_SYMMI (PccB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z5R2_SYMMI) HSP 1 Score: 275 bits (704), Expect = 4.750e-91 Identity = 137/191 (71.73%), Postives = 162/191 (84.82%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVEG-SYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THA KICKVMD A+ VGAPVIGLNDSGGARIQEG+DSLAGYA+VFQRNVDASGV+PQIS+IMGPCAGGAVYSPAMTDF FMV+ SY FVTGP+VVKTVT ED+T EELGGA+THT SGVAHGAFANDVEAL +R+L+ YLPL+NR+ P +P+ D +R E L +P DPN+PY+M+ ++ ++VDE
Sbjct: 40 THAQKICKVMDMAMRVGAPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVIPQISMIMGPCAGGAVYSPAMTDFIFMVQRTSYMFVTGPNVVKTVTMEDVTQEELGGAETHTSLSGVAHGAFANDVEALRALRQLYSYLPLNNRDGVPHVPTDDKRDRLEESLRFLVPDDPNIPYEMRELVSKVVDE 230
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A7S3LK18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK18_9STRA) HSP 1 Score: 283 bits (723), Expect = 2.920e-90 Identity = 144/191 (75.39%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMV-EGSYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THA KICK+MDKA+ VGAPVIGLNDSGGARIQEG+DSLAGYA+VFQRNV+ASGV+PQ+SVIMGPCAGGAVYSPA+TDF MV + SY FVTGP VVKTVTNE++T EELGGAK+HT KSGV+H AF NDVEAL RELFDYLPLSNRE PP P+ DP ER L IP+DPNVPYDM VI +IVD+
Sbjct: 137 THAQKICKIMDKAMSVGAPVIGLNDSGGARIQEGVDSLAGYADVFQRNVEASGVIPQLSVIMGPCAGGAVYSPAITDFIMMVRDTSYMFVTGPEVVKTVTNEEVTQEELGGAKSHTQKSGVSHLAFDNDVEALKMTRELFDYLPLSNREEPPSRPTKDPIERADPTLDLIIPSDPNVPYDMVTVISKIVDD 327
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: G5ZX79_9PROT (Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=G5ZX79_9PROT) HSP 1 Score: 278 bits (712), Expect = 6.040e-89 Identity = 139/191 (72.77%), Postives = 160/191 (83.77%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVEGS-YQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THAAKICK+MD+AL VG PV+GLNDSGGARIQEG+ SL GYAEVFQRNV ASGVVPQIS++MGPCAGGAVYSPA+TDF FMVEGS Y FVTGP VVKTVT+ED+T+EELGGA HT SGVAHGAFAND++ L+Q R L +LPLSNRE PVL + DP +R L G IP +PN+PYDM+ V+REIVD+
Sbjct: 103 THAAKICKIMDQALKVGVPVVGLNDSGGARIQEGVASLGGYAEVFQRNVLASGVVPQISLVMGPCAGGAVYSPAITDFIFMVEGSSYMFVTGPDVVKTVTHEDLTAEELGGASQHTKTSGVAHGAFANDLDMLMQTRRLMSFLPLSNREEAPVLQTTDPVDRPSAVLDGIIPDNPNMPYDMKKVVREIVDD 293
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A5A8EFN3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFN3_CAFRO) HSP 1 Score: 278 bits (711), Expect = 2.510e-88 Identity = 140/191 (73.30%), Postives = 159/191 (83.25%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMV-EGSYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THA KICK+MD+A+ VGAPVIGLNDSGGARIQEG+DSLAGYAEVFQRNVDASGVVPQ+++IMGPCAGGAVYSPAMTDFTFMV + SY FVTGP VVKTVT E +T E LGGAKTHT KSGV+H AF NDVEAL MRE +LP SNR P + D A R C+ L G +PTDPNVPYDM++V+RE++DE
Sbjct: 149 THAEKICKIMDRAVEVGAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVDASGVVPQLTLIMGPCAGGAVYSPAMTDFTFMVRDTSYMFVTGPDVVKTVTQETVTQEVLGGAKTHTSKSGVSHLAFDNDVEALRGMREFVSFLPSSNRVPAPHVDPNDSATRSCDMLEGLVPTDPNVPYDMKVVVREVLDE 339
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A7S0SX47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SX47_9STRA) HSP 1 Score: 269 bits (688), Expect = 5.220e-88 Identity = 135/190 (71.05%), Postives = 157/190 (82.63%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVE-GSYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVD 567
THA KICKVMD A+ VGAPVIGLNDSGGARIQEGIDSL GYA+VF +NV+ASG++PQISVIMGPCAGGAVYSPAMTDF FMV+ SY FVTGPSVVKTVT ED+T EELGGA+THT SGVAHGAF ND+ AL ++RELF YLPL+N+ A PVL S D R L+ +P DPN+PYDM +++++VD
Sbjct: 111 THAQKICKVMDMAMKVGAPVIGLNDSGGARIQEGIDSLGGYADVFLKNVNASGIIPQISVIMGPCAGGAVYSPAMTDFIFMVKRSSYMFVTGPSVVKTVTQEDVTQEELGGAETHTSLSGVAHGAFDNDIIALEKIRELFQYLPLNNKLAAPVLESDDDRNRQENSLNYLVPDDPNIPYDMLAIVKKVVD 300
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A369TBX6_9PROT (Acyl-CoA carboxylase subunit beta n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TBX6_9PROT) HSP 1 Score: 274 bits (701), Expect = 2.710e-87 Identity = 140/191 (73.30%), Postives = 159/191 (83.25%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVE-GSYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
+HA KICKVMDKAL VGAPVIGLNDSGGARIQEG+DSLAGYAEVFQRNV+ASGVVPQ+S+IMGPCAGGAVYSPAMTDF FMV+ SY FVTGP VVKTVT+E +TSEELGGA THT KSGVA AF NDVEAL + R++FD+LPLSNRE PPV P+ D R+ L +P PN PYDM+ +I ++VDE
Sbjct: 103 SHAEKICKVMDKALQVGAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVEASGVVPQLSLIMGPCAGGAVYSPAMTDFIFMVQDSSYMFVTGPEVVKTVTHETVTSEELGGAITHTSKSGVADLAFENDVEALQRTRQIFDFLPLSNREQPPVRPTTDSPNREEPSLDTLVPPSPNKPYDMKELIEKVVDE 293
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A7S4BL14_CHRCT (Hypothetical protein (Fragment) n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BL14_CHRCT) HSP 1 Score: 271 bits (693), Expect = 4.980e-87 Identity = 137/191 (71.73%), Postives = 157/191 (82.20%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVEGS-YQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THA KICK+MD+A+LVGAPVIGLNDSGGARIQEG+ SLAGYAEVFQRNVDASGVVPQ+SVIMGPCAGGAVYSPAMTDFT MVE S Y FVTGP VVKTVTNE++TSE LGGA+THT SGVAH + ND+EAL++MR L +LP SNRE PP + DP R E L +P DPNVPYDM ++R ++D+
Sbjct: 169 THAEKICKIMDQAVLVGAPVIGLNDSGGARIQEGVASLAGYAEVFQRNVDASGVVPQLSVIMGPCAGGAVYSPAMTDFTMMVENSSYMFVTGPEVVKTVTNEEVTSEVLGGARTHTRTSGVAHLSALNDLEALMKMRSLVSFLPSSNREPPPTRHTEDPRNRADEALETMVPQDPNVPYDMGDLVRRVLDD 359
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: A0A0F2RAK7_9PROT (Methylmalonyl-CoA carboxyltransferase n=4 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A0F2RAK7_9PROT) HSP 1 Score: 273 bits (698), Expect = 7.650e-87 Identity = 140/191 (73.30%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMV-EGSYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THA KICKVMD+A+ VGAPVIGLNDSGGARIQEG+DSLAGYAEVFQRNV ASGV+PQISVIMGPCAGGAVYSPAMTD MV + SY FVTGP VVKTVT+E +T+EELGGA THT KSGVA AF NDVEALLQ+R L D+LP +N+E PPV P+ADPA+R+ L IP +PN+PYDM+ +I ++VDE
Sbjct: 103 THAEKICKVMDQAMKVGAPVIGLNDSGGARIQEGMDSLAGYAEVFQRNVMASGVIPQISVIMGPCAGGAVYSPAMTDIIAMVKDSSYMFVTGPDVVKTVTHEVVTAEELGGAVTHTAKSGVAELAFDNDVEALLQIRRLMDFLPANNKEKPPVRPTADPADREDFSLDTLIPNNPNMPYDMKELITKVVDE 293
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Match: H6SN44_PARPM (Carboxyl transferase n=2 Tax=Pararhodospirillum TaxID=1612157 RepID=H6SN44_PARPM) HSP 1 Score: 273 bits (698), Expect = 7.650e-87 Identity = 139/191 (72.77%), Postives = 158/191 (82.72%), Query Frame = 1
Query: 1 THAAKICKVMDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISVIMGPCAGGAVYSPAMTDFTFMVE-GSYQFVTGPSVVKTVTNEDITSEELGGAKTHTVKSGVAHGAFANDVEALLQMRELFDYLPLSNREAPPVLPSADPAERDCEGLHGFIPTDPNVPYDMQLVIREIVDE 570
THAAKICK+MDKA+ VGAPVIGLNDSGGARIQEG+DSLAGYAEVFQRNV ASGV+PQIS+IMGPCAGGAVYSPAMTDF FMVE SY FVTGP VVKTVT+E +T+EELGGA THT KSGVA AF NDV ALLQ+R D+LP SN+E PPV P+ DP +R L IP +PN PYDM+ ++ ++VDE
Sbjct: 103 THAAKICKIMDKAMAVGAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVMASGVIPQISMIMGPCAGGAVYSPAMTDFIFMVEDSSYMFVTGPDVVKTVTHEQVTAEELGGAITHTSKSGVADLAFENDVHALLQLRRFIDFLPASNKEKPPVRPTNDPWDRLDYSLDSLIPNNPNKPYDMKELLEKVVDE 293 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114343.2995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114343.2995.1 >prot_M-pyrifera_M_contig114343.2995.1 ID=prot_M-pyrifera_M_contig114343.2995.1|Name=mRNA_M-pyrifera_M_contig114343.2995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp MDKALLVGAPVIGLNDSGGARIQEGIDSLAGYAEVFQRNVDASGVVPQISback to top mRNA from alignment at M-pyrifera_M_contig114343:2..571- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114343.2995.1 ID=mRNA_M-pyrifera_M_contig114343.2995.1|Name=mRNA_M-pyrifera_M_contig114343.2995.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig114343:2..571- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114343:2..571- >mRNA_M-pyrifera_M_contig114343.2995.1 ID=mRNA_M-pyrifera_M_contig114343.2995.1|Name=mRNA_M-pyrifera_M_contig114343.2995.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig114343:2..571- (Macrocystis pyrifera P11B4 male)back to top |