mRNA_M-pyrifera_M_contig114336.2991.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A6I3WMQ8_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3WMQ8_9ACTN) HSP 1 Score: 337 bits (864), Expect = 1.550e-113 Identity = 152/190 (80.00%), Postives = 168/190 (88.42%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RFRLE N QPIAFDW FE+VVPP EERS+RR YR ATDLVRYHQTGVCSGW+++DGER E+TP++WVSTRDHSWGVRYDVG PPTD+EPG GIPAGVGFQMIWCPVL+QRPDGS YA+HLHYTWH +G HGQKMVTA +E+PDG DQIVDIVP LRFDP NRRLLGG LDCRMADG+ RPLTIEV+
Sbjct: 108 RFRLEPNGCQPIAFDWTFEAVVPPVNEERSWRRSGYRLATDLVRYHQTGVCSGWVQIDGERHEITPDTWVSTRDHSWGVRYDVGLPPTDLEPGGGIPAGVGFQMIWCPVLMQRPDGSRYALHLHYTWHRLGTHGQKMVTAGVEYPDGVVDQIVDIVPTLRFDPANRRLLGGELDCRMADGSARPLTIEVL 297
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A2E0Z2F6_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0Z2F6_9GAMM) HSP 1 Score: 288 bits (737), Expect = 2.760e-94 Identity = 130/190 (68.42%), Postives = 152/190 (80.00%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RFRLEAND QP+AFDWLFE VVPPF EER+ R YR ++LVRYHQ G SGWIE+DG+R EMTP++W STRDHSWGVRYDVG PPTDVEP EGIPAG GF MIWCP+L+ R DGS YAMHLH+TW + QKMVT++IE+ +G+ + I DIVP LRFD DNRRLLGG LDC +ADG+ R L +EV+
Sbjct: 108 RFRLEANDAQPLAFDWLFEGVVPPFTEERTHLMRDYRLMSELVRYHQVGTASGWIELDGQRIEMTPDTWTSTRDHSWGVRYDVGLPPTDVEPNEGIPAGAGFMMIWCPLLMTRRDGSRYAMHLHFTWFNMPGFEQKMVTSRIEYDNGAEEAITDIVPRLRFDADNRRLLGGKLDCTLADGSTRSLGVEVL 297
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A7C8DNQ8_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8DNQ8_9DELT) HSP 1 Score: 283 bits (725), Expect = 1.800e-92 Identity = 132/190 (69.47%), Postives = 151/190 (79.47%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RFRLEAN+ QPIAFDWLFE+VVPPF EER+ R+ +R ++LVRYHQTG SGWIE+DGER EMTP++WVSTRDHSWGVRYDVG P TDVEP IP GVGF MIWCPVL++RPDGSHYAMHLH+T +A QKM TA+IEHPDG + I +I P LRF+ NRRL GG L C MADG+ R L IEVM
Sbjct: 108 RFRLEANECQPIAFDWLFEAVVPPFMEERTHLRQQFRVMSELVRYHQTGTASGWIELDGERHEMTPDTWVSTRDHSWGVRYDVGVPGTDVEPRPTIPPGVGFMMIWCPVLMERPDGSHYAMHLHFTRYAAPGFHQKMTTARIEHPDGGEEVIEEIDPELRFNASNRRLEGGALSCTMADGSARTLDIEVM 297
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A2E9GQP0_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9GQP0_9DELT) HSP 1 Score: 276 bits (705), Expect = 1.910e-89 Identity = 128/190 (67.37%), Postives = 148/190 (77.89%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RFRLE ND QPIAFDWLFE+ VPPF EER+ R +R ++LVRYHQTGV SGWIE+DGER E+ P+SWVSTRDHSWGVRYDVG PP+D+E IP GVGF MIWCPVL++R DGS YA+HLH+T QKMVTA++EHPDGS + I DI P L FDP+NRRLLGG+L C MADG R L IEV+
Sbjct: 108 RFRLEPNDCQPIAFDWLFEAAVPPFLEERTHLRAQFRVMSELVRYHQTGVASGWIELDGERYEINPDSWVSTRDHSWGVRYDVGVPPSDLEARPSIPPGVGFMMIWCPVLMERRDGSRYALHLHFTRFEATGFQQKMVTARVEHPDGSEEVIADIDPDLHFDPNNRRLLGGSLRCTMADGKTRKLEIEVL 297
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A7Y1ZFY6_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZFY6_9GAMM) HSP 1 Score: 271 bits (694), Expect = 8.820e-88 Identity = 122/190 (64.21%), Postives = 145/190 (76.32%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RFRLEAND+QP+AFDWLFE VVPPF EER+ R YR ++LVRYHQ G SGWIE+DG R EMTP++W STRDHSWGVRYDVG P DVEP EGIPAG GF MIWCP+L+ + DGS Y MHLH+TW + QKMVT+++E G I DI+P L F+P NRRLLGG L+C +ADG+ER L +EV+
Sbjct: 108 RFRLEANDSQPLAFDWLFEGVVPPFTEERTHLMRDYRLMSELVRYHQIGTASGWIELDGARIEMTPDTWTSTRDHSWGVRYDVGAPVADVEPNEGIPAGAGFMMIWCPLLMTKSDGSQYGMHLHFTWFNMPGFEQKMVTSRLEFDGGGEIGITDIIPRLEFNPQNRRLLGGELECTLADGSERTLVMEVL 297
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A7Y6AIH5_9ACTN (Uncharacterized protein n=2 Tax=Streptomycetaceae TaxID=2062 RepID=A0A7Y6AIH5_9ACTN) HSP 1 Score: 261 bits (668), Expect = 7.280e-84 Identity = 122/190 (64.21%), Postives = 141/190 (74.21%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RF LE ND QPIAFDW FE+VVPP EER+ RRAYR DLVRYHQTGV GW+EV GERTE+TP++WVSTRDHSWG RYDVGTP TD+EP G+P F+MIWCPVL++RPDGS YA+ LHY QK VT +EHPDG +Q D+VP L +DP NRRLLGG + MADG+ RPL IEV+
Sbjct: 107 RFVLEPNDAQPIAFDWTFEAVVPPVCEERTHNRRAYRVTADLVRYHQTGVAHGWVEVAGERTEITPDTWVSTRDHSWGTRYDVGTPATDLEPS-GLPDSASFRMIWCPVLMERPDGSRYALFLHYQITTAPGFAQKRVTGGVEHPDGRVEQWADLVPELAYDPANRRLLGGKVHATMADGSARPLQIEVL 295
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A7K0WRA2_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A7K0WRA2_9ACTN) HSP 1 Score: 251 bits (641), Expect = 9.210e-80 Identity = 118/190 (62.11%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RF L+AN+ QPI+F+ LF+ VVPP EER+ R +R + DLVRYHQTGV SGWIE DGERTE+TPESWV TRDHSWGVRYDVG P D PAGVGF MIWCP L++RPDGS YA+HLH+T + QK VTA +EH DGS + I+D+ P LRFDP+NRRLLGG + M DG++RP+ IEV+
Sbjct: 109 RFSLQANEIQPISFEILFDGVVPPQLEERTHMRDQFRVSADLVRYHQTGVASGWIERDGERTEVTPESWVCTRDHSWGVRYDVGPPAVDRGDSNAFPAGVGFMMIWCPALMERPDGSRYALHLHFTLVQMPGFVQKTVTAGVEHIDGSVEPILDLHPELRFDPENRRLLGGRVTGTMQDGSQRPIQIEVL 298
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A0J0UUX2_9ACTN (Uncharacterized protein n=7 Tax=root TaxID=1 RepID=A0A0J0UUX2_9ACTN) HSP 1 Score: 251 bits (640), Expect = 1.300e-79 Identity = 114/190 (60.00%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RF LEAN+ QPI+F+ F+ +VPP EER+ R YR + DLVRYHQTGV +GW+++DG+RTE+ P+SWV TRDHSWGVRYDVG P D PAGVGF MIWCP L++RPDGS YA+HLH+T + QK VTA +EH DGS D IVD+ P L+FDP+NRRLLGGT+ M DG++RP+ IEV+
Sbjct: 109 RFSLEANEVQPISFEITFDGIVPPQLEERTHMRDQYRVSADLVRYHQTGVATGWVQLDGQRTEVNPDSWVCTRDHSWGVRYDVGPPTVDRADSTAFPAGVGFMMIWCPALMERPDGSRYALHLHFTLVQMPGFAQKTVTAGVEHVDGSVDPIVDLQPDLQFDPENRRLLGGTVMGTMQDGSQRPIQIEVL 298
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: A0A7K2YW24_9ACTN (Uncharacterized protein n=3 Tax=Streptomycetaceae TaxID=2062 RepID=A0A7K2YW24_9ACTN) HSP 1 Score: 249 bits (635), Expect = 7.200e-79 Identity = 117/190 (61.58%), Postives = 141/190 (74.21%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RF LEAN+TQPIAFDW FES VP E+R+ RRAYRT DLVRYHQTGV +GW+EVDGERTE+T ++WVSTRDHSWG RYDVG+P +D+EP G+PA V F+MIW P+L++R DGS YA+ LHY QK V +EHPDG ++ D+VP L +DP NRRL GG L MADG+ RPL IEV+
Sbjct: 108 RFVLEANETQPIAFDWTFESAVPAVCEDRTHNRRAYRTTADLVRYHQTGVATGWVEVDGERTEITRDAWVSTRDHSWGTRYDVGSPASDLEPA-GMPASVSFRMIWAPILMERQDGSRYALFLHYQITTAPGFTQKRVMGGVEHPDGRVEEWADLVPDLTYDPANRRLRGGKLHATMADGSARPLQIEVV 296
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Match: UPI001E5919D1 (hypothetical protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E5919D1) HSP 1 Score: 237 bits (605), Expect = 2.400e-74 Identity = 108/190 (56.84%), Postives = 137/190 (72.11%), Query Frame = 1
Query: 1 RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVCSGWIEVDGERTEMTPESWVSTRDHSWGVRYDVGTPPTDVEPGEGIPAGVGFQMIWCPVLLQRPDGSHYAMHLHYTWHAVGDHGQKMVTAQIEHPDGSSDQIVDIVPHLRFDPDNRRLLGGTLDCRMADGTERPLTIEVM 570
RF LEANDTQPIAFDWLF + +P E+R+ R+ YR + DLVRYHQ G CSGW+EVDGERTE+ P+SWVSTRDHSWGVRYD+G P TD+EP G+ G FQ +W P+L++RPDG+ Y + L+ + A QK A +EHPDG ++IVD+ P L +DP NRRL GGTL + DG+ R L +EV+
Sbjct: 108 RFVLEANDTQPIAFDWLFTAELPATLEDRTHTRQGYRVSADLVRYHQIGTCSGWVEVDGERTELDPDSWVSTRDHSWGVRYDIGEPATDLEPTRGLEGGT-FQFVWSPILMERPDGTRYGLFLNVSKMAFPGFEQKTTMAMVEHPDGRIERIVDLEPELAYDPTNRRLRGGTLHATLEDGSARALQVEVV 296 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114336.2991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114336.2991.1 >prot_M-pyrifera_M_contig114336.2991.1 ID=prot_M-pyrifera_M_contig114336.2991.1|Name=mRNA_M-pyrifera_M_contig114336.2991.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp RFRLEANDTQPIAFDWLFESVVPPFEEERSFRRRAYRTATDLVRYHQTGVback to top mRNA from alignment at M-pyrifera_M_contig114336:3..572+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114336.2991.1 ID=mRNA_M-pyrifera_M_contig114336.2991.1|Name=mRNA_M-pyrifera_M_contig114336.2991.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig114336:3..572+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114336:3..572+ >mRNA_M-pyrifera_M_contig114336.2991.1 ID=mRNA_M-pyrifera_M_contig114336.2991.1|Name=mRNA_M-pyrifera_M_contig114336.2991.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig114336:3..572+ (Macrocystis pyrifera P11B4 male)back to top |