mRNA_M-pyrifera_M_contig114310.2984.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: UPI0012633551 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI0012633551) HSP 1 Score: 75.5 bits (184), Expect = 3.670e-15 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 7 MADESGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
MA S + TR+ K ICVFCGS+AG S++ AA ELGK +VE I LVYGGG+VGLMG+I
Sbjct: 1 MASSSSNEKTRKFKRICVFCGSRAGYKSSFSEAALELGKELVERNIDLVYGGGSVGLMGLI 61
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A067L8A3_JATCU (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L8A3_JATCU) HSP 1 Score: 73.9 bits (180), Expect = 1.420e-14 Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 13 DESGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
D S S TR K+ICVFCGS+AG S++ AA ELGK +VE I LVYGGG+VGLMG+I
Sbjct: 6 DTSASEKTRRFKSICVFCGSRAGYKSSFSDAALELGKQLVERKIDLVYGGGSVGLMGLI 64
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A250XFK0_9CHLO (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XFK0_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 1.990e-14 Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 40 ELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
E+K ICVFCGS +G Y A AA LG+HMV+ GIGLVYGGGTVGLMG+I
Sbjct: 43 EVKRICVFCGSASGIKPEYEAVAAALGEHMVQQGIGLVYGGGTVGLMGVI 92
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A1G6ST50_9GAMM (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=2 Tax=Xanthomonadales TaxID=135614 RepID=A0A1G6ST50_9GAMM) HSP 1 Score: 71.2 bits (173), Expect = 9.800e-14 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 43 LKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
+K +CV+CGS AGND YAAAA LGK + G+GLVYGGG VGLMGI+
Sbjct: 1 MKTLCVYCGSNAGNDPRYAAAAVSLGKRIAAEGMGLVYGGGNVGLMGIV 49
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: UPI00068B400E (TIGR00730 family Rossman fold protein n=1 Tax=Thermopetrobacter sp. TC1 TaxID=1495045 RepID=UPI00068B400E) HSP 1 Score: 71.2 bits (173), Expect = 1.070e-13 Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 28 VATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMG 183
++TR K++CV+CGS GND +YA AA +LG+ + E+GIGLVYGGG++GLMG
Sbjct: 1 MSTRPKKSLCVYCGSSPGNDPAYAEAARKLGRQLAEAGIGLVYGGGSLGLMG 52
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A453MKN2_AEGTS (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MKN2_AEGTS) HSP 1 Score: 70.1 bits (170), Expect = 1.690e-13 Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 10 ADESGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
++ SG A+R + +CVFCGS AG +Y AAA +LG+ +VE GI LVYGGG+VGLMG++
Sbjct: 25 SNNSGKKASR-FRRVCVFCGSSAGRKAAYQAAAVQLGQQLVERGIDLVYGGGSVGLMGLV 83
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A835XZR7_9CHLO (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZR7_9CHLO) HSP 1 Score: 71.2 bits (173), Expect = 1.730e-13 Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 37 RELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
REL+ +CVFCG+ GND +Y AAA +LG+++V IGLVYGGGTVGLMG I
Sbjct: 10 RELRKLCVFCGASPGNDPAYMAAAKQLGEYLVSERIGLVYGGGTVGLMGEI 60
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A150GXP2_GONPE (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GXP2_GONPE) HSP 1 Score: 70.9 bits (172), Expect = 2.450e-13 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 7 MADESGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
M+ + +R+L ICVFCG+ G+D Y AAA LG+H+V+ IGLVYGGGTVGLMG I
Sbjct: 1 MSTSTDGADSRQLLKICVFCGASTGSDPRYMAAAKALGEHLVQQKIGLVYGGGTVGLMGEI 61
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A804II89_MUSAM (Cytokinin riboside 5'-monophosphate phosphoribohydrolase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804II89_MUSAM) HSP 1 Score: 70.1 bits (170), Expect = 2.720e-13 Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 19 SGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
SGS + ++ICVFCGS++GN S++ AA +LGK +VE I LVYGGG+VGLMG+I
Sbjct: 11 SGSGSKARFRSICVFCGSRSGNRPSFSEAALDLGKQLVERNINLVYGGGSVGLMGLI 67
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Match: A0A371E2L9_MUCPR (Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371E2L9_MUCPR) HSP 1 Score: 67.4 bits (163), Expect = 3.740e-13 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 1 KRMADESGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYGGGTVGLMGII 189
+ M E + K ICVFCGS GN SY AA ELGK +V I LVYGGG++GLMG++
Sbjct: 11 EEMEGEETEMKQSRFKRICVFCGSSPGNKSSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLV 73 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114310.2984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114310.2984.1 >prot_M-pyrifera_M_contig114310.2984.1 ID=prot_M-pyrifera_M_contig114310.2984.1|Name=mRNA_M-pyrifera_M_contig114310.2984.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=61bp MADESGSVATRELKNICVFCGSQAGNDGSYAAAAAELGKHMVESGIGLVYback to top mRNA from alignment at M-pyrifera_M_contig114310:1..189- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114310.2984.1 ID=mRNA_M-pyrifera_M_contig114310.2984.1|Name=mRNA_M-pyrifera_M_contig114310.2984.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=189bp|location=Sequence derived from alignment at M-pyrifera_M_contig114310:1..189- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114310:1..189- >mRNA_M-pyrifera_M_contig114310.2984.1 ID=mRNA_M-pyrifera_M_contig114310.2984.1|Name=mRNA_M-pyrifera_M_contig114310.2984.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig114310:1..189- (Macrocystis pyrifera P11B4 male)back to top |