mRNA_M-pyrifera_M_contig11430.2979.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11430.2979.1
Unique NamemRNA_M-pyrifera_M_contig11430.2979.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: D8LF95_ECTSI (H(+)-exporting diphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF95_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 7.100e-44
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPE 258
            VAM+CKTGSATNIIYGLALGYKS I+PVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPE
Sbjct:  377 VAMSCKTGSATNIIYGLALGYKSTIVPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPE 462
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A835YSH3_9STRA (H(+)-exporting diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH3_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.340e-37
Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPP 255
            VA++CKTGSATNIIYGL+LGYKS IIPVFVLAAII+TSF +C TYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEM +L P
Sbjct:  401 VALSCKTGSATNIIYGLSLGYKSVIIPVFVLAAIIYTSFGMCETYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMCQLAP 485
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A7S2Y359_9STRA (H(+)-exporting diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y359_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.270e-36
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPE 258
            VA +CKTG+ATN+IYGLALGY S IIPVFVLAA IFTSF+LC  YGVAL A+GMLSTLATGLTIDAYGPVCDNAGGIAEMAEL PE
Sbjct:  396 VAESCKTGAATNVIYGLALGYLSVIIPVFVLAAAIFTSFKLCDLYGVALTALGMLSTLATGLTIDAYGPVCDNAGGIAEMAELNPE 481
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A7R9YGC6_9STRA (H(+)-exporting diphosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGC6_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.590e-35
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPE 258
            V+ +C+TG+ATNIIYGLALGYKSAI+PV VLA II+TSF LC  YGVALAA+GMLSTLATGLTID YGPVCDNAGGIAEMAEL PE
Sbjct:  419 VSESCQTGAATNIIYGLALGYKSAIVPVIVLAVIIWTSFTLCDLYGVALAAVGMLSTLATGLTIDGYGPVCDNAGGIAEMAELQPE 504
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A812XFY1_SYMMI (H(+)-exporting diphosphatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XFY1_SYMMI)

HSP 1 Score: 132 bits (332), Expect = 4.340e-35
Identity = 65/84 (77.38%), Postives = 76/84 (90.48%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELP 252
            +A +CKTG+ATNIIYGL+LGYKS I+PVFVLA I++ +F+LC  YG+ALAA+GML  LATGLTIDAYGPVCDNAGGIAEMAELP
Sbjct:  214 LANSCKTGAATNIIYGLSLGYKSVIVPVFVLALIVYVAFELCDLYGIALAAVGMLGNLATGLTIDAYGPVCDNAGGIAEMAELP 297
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A7S1XPD7_9STRA (H(+)-exporting diphosphatase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPD7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.780e-34
Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPE 258
            V+ +C+TG+ATNIIYG++LGYKSAIIPV VLA II+ SF+LC  YGVALAA GMLSTLATGLTID YGPVCDNAGGIAEMAEL PE
Sbjct:  418 VSDSCRTGAATNIIYGMSLGYKSAIIPVLVLAVIIWVSFKLCDLYGVALAACGMLSTLATGLTIDGYGPVCDNAGGIAEMAELQPE 503
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A6V1PZU8_HETAK (H(+)-exporting diphosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PZU8_HETAK)

HSP 1 Score: 132 bits (333), Expect = 4.880e-34
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPP 255
            VA+AC TG+ATN+I+GLALGY S IIPVFVLA  IFT+F+LC  YGVAL A+GMLSTLATGLTIDAYGPVCDNAGGIAEM EL P
Sbjct:  403 VALACTTGAATNVIHGLALGYMSVIIPVFVLAGAIFTAFKLCDLYGVALVAVGMLSTLATGLTIDAYGPVCDNAGGIAEMCELDP 487
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BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A6V1Q500_HETAK (H(+)-exporting diphosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q500_HETAK)

HSP 1 Score: 132 bits (333), Expect = 4.890e-34
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPP 255
            VA+AC TG+ATN+I+GLALGY S IIPVFVLA  IFT+F+LC  YGVAL A+GMLSTLATGLTIDAYGPVCDNAGGIAEM EL P
Sbjct:  403 VALACTTGAATNVIHGLALGYMSVIIPVFVLAGAIFTAFKLCDLYGVALVAVGMLSTLATGLTIDAYGPVCDNAGGIAEMCELDP 487
[Close]
BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A1Z5JF60_FISSO (H(+)-exporting diphosphatase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JF60_FISSO)

HSP 1 Score: 132 bits (331), Expect = 5.390e-34
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPP 255
            VA +CKTG+ATN+IYG+ALGYKSAIIPV VLA +I+TSF +C  YGVALAAIG LS LATGLTID YGPVCDNAGGIAEMAEL P
Sbjct:  405 VANSCKTGAATNMIYGIALGYKSAIIPVLVLALVIYTSFTICDMYGVALAAIGFLSNLATGLTIDVYGPVCDNAGGIAEMAELDP 489
[Close]
BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Match: A0A1Z5KNB2_FISSO (H(+)-exporting diphosphatase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNB2_FISSO)

HSP 1 Score: 132 bits (331), Expect = 9.220e-34
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 
Query:    1 VAMACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAIGMLSTLATGLTIDAYGPVCDNAGGIAEMAELPP 255
            VA +CKTG+ATN+IYG+ALGYKSAIIPV VLA +I+TSF +C  YGVALAAIG LS LATGLTID YGPVCDNAGGIAEMAEL P
Sbjct:  405 VANSCKTGAATNMIYGIALGYKSAIIPVLVLALVIYTSFTICDMYGVALAAIGFLSNLATGLTIDVYGPVCDNAGGIAEMAELDP 489
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11430.2979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF95_ECTSI7.100e-4496.51H(+)-exporting diphosphatase n=2 Tax=Ectocarpus Ta... [more]
A0A835YSH3_9STRA1.340e-3787.06H(+)-exporting diphosphatase n=1 Tax=Tribonema min... [more]
A0A7S2Y359_9STRA2.270e-3684.88H(+)-exporting diphosphatase n=1 Tax=Fibrocapsa ja... [more]
A0A7R9YGC6_9STRA1.590e-3582.56H(+)-exporting diphosphatase n=1 Tax=Pinguiococcus... [more]
A0A812XFY1_SYMMI4.340e-3577.38H(+)-exporting diphosphatase n=1 Tax=Symbiodinium ... [more]
A0A7S1XPD7_9STRA4.780e-3480.23H(+)-exporting diphosphatase (Fragment) n=1 Tax=Ph... [more]
A0A6V1PZU8_HETAK4.880e-3480.00H(+)-exporting diphosphatase n=1 Tax=Heterosigma a... [more]
A0A6V1Q500_HETAK4.890e-3480.00H(+)-exporting diphosphatase n=1 Tax=Heterosigma a... [more]
A0A1Z5JF60_FISSO5.390e-3480.00H(+)-exporting diphosphatase n=1 Tax=Fistulifera s... [more]
A0A1Z5KNB2_FISSO9.220e-3480.00H(+)-exporting diphosphatase n=1 Tax=Fistulifera s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11430contigM-pyrifera_M_contig11430:739..1691 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score159.5
Seed ortholog evalue7.8e-37
Seed eggNOG ortholog2880.D8LF95
Preferred nameAVP1
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categorysignal anchor
GOsGO:0000325,GO:0001101,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0006810,GO:0006811,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0009414,GO:0009415,GO:0009507,GO:0009526,GO:0009536,GO:0009628,GO:0009651,GO:0009678,GO:0009705,GO:0009914,GO:0009926,GO:0009941,GO:0010008,GO:0010035,GO:0010248,GO:0010817,GO:0012505,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0022804,GO:0022857,GO:0031090,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032501,GO:0032502,GO:0034220,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044433,GO:0044434,GO:0044435,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0060918,GO:0065007,GO:0065008,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099402,GO:1901700
EggNOG free text desc.hydrogen-translocating pyrophosphatase activity
EggNOG OGs2QPJC@2759,COG3808@1
EC3.6.1.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size285
Cds size279
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11430.2979.1prot_M-pyrifera_M_contig11430.2979.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11430 745..1691 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815659.156104-UTR-M-pyrifera_M_contig11430:738..7441622815659.156104-UTR-M-pyrifera_M_contig11430:738..744Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11430 739..744 +
1692277508.965391-UTR-M-pyrifera_M_contig11430:738..7441692277508.965391-UTR-M-pyrifera_M_contig11430:738..744Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11430 739..744 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815659.1664488-CDS-M-pyrifera_M_contig11430:744..8741622815659.1664488-CDS-M-pyrifera_M_contig11430:744..874Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11430 745..874 +
1692277508.9765615-CDS-M-pyrifera_M_contig11430:744..8741692277508.9765615-CDS-M-pyrifera_M_contig11430:744..874Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11430 745..874 +
1622815659.1825125-CDS-M-pyrifera_M_contig11430:1542..16911622815659.1825125-CDS-M-pyrifera_M_contig11430:1542..1691Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11430 1543..1691 +
1692277508.9937682-CDS-M-pyrifera_M_contig11430:1542..16911692277508.9937682-CDS-M-pyrifera_M_contig11430:1542..1691Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11430 1543..1691 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11430.2979.1

>prot_M-pyrifera_M_contig11430.2979.1 ID=prot_M-pyrifera_M_contig11430.2979.1|Name=mRNA_M-pyrifera_M_contig11430.2979.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
MACKTGSATNIIYGLALGYKSAIIPVFVLAAIIFTSFQLCGTYGVALAAI
GMLSTLATGLTIDAYGPVCDNAGGIAEMAELPPEASACCMQQ*
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mRNA from alignment at M-pyrifera_M_contig11430:739..1691+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11430.2979.1 ID=mRNA_M-pyrifera_M_contig11430.2979.1|Name=mRNA_M-pyrifera_M_contig11430.2979.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=953bp|location=Sequence derived from alignment at M-pyrifera_M_contig11430:739..1691+ (Macrocystis pyrifera P11B4 male)
GTGGCCATGGCGTGCAAGACCGGTTCGGCGACGAACATCATCTACGGCCT
TGCTCTGGGGTACAAGTCGGCGATCATCCCCGTGTTCGTGCTGGCGGCCA
TCATCTTCACGTCCTTCCAGCTCTGCGGAACTTACGGTGAGCAGTCGAAG
GCTTTGGAAGCAACACACCAACGCCCCTCACACGCACGCGCACCCGCACA
CCTCCTCTGTGATGTTTTTTTTTTTTTTTTTTAGCCCTTTGACAATACCC
GTTTTTGTTGCTGCGTTTTTGTTGTTTTTGCCTGGCGCGTTGTGTTTGCG
GTTTCGCCCAGGCGGATGGGCAAGGGTCAGGATGGGGTCGTGGTCTCGCG
TGTGGTGCGCGCGGTGGGTGTACCCATGATATCTCGAAATTTTTCGCGTT
GTTCTCTGTCGCGCGCAACCATCGTTGACTCTCCCTCCCTCTGAACTGCC
TTCCCCGCCCATTCCTGGCCCCCCCCCAACCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCGCCGCCCCCCTCGCCCTCCTCCCCCTGTCCCTCCCCTCC
GTTGTGTGCTNNNNNNNNNNAACTCCGGCAGCTCCAGCTCGCCCCTCCAT
CTCCCCCTGCTGTTGCTGCAATAACCGTCGCGCTTCATCGCCCCCGCTCT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCTGTGCTCC
CTGTGCTCCCTGCTCCCGTTGCGTCTCGCACGGTTTGCTGTACGCGTCTG
TCTCTGTCTGTGGCCCGCTGCTGTTATCGTGGTATTTTGTATTCGTGGTA
TTAGGTGTCGCCCTTGCCGCGATCGGCATGCTGTCCACGCTTGCCACCGG
ACTGACGATCGACGCTTACGGCCCCGTCTGTGACAACGCCGGAGGCATCG
CCGAGATGGCCGAGCTCCCCCCCGAGGCGAGCGCGTGTTGCATGCAGCAA
TGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11430:739..1691+

>mRNA_M-pyrifera_M_contig11430.2979.1 ID=mRNA_M-pyrifera_M_contig11430.2979.1|Name=mRNA_M-pyrifera_M_contig11430.2979.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig11430:739..1691+ (Macrocystis pyrifera P11B4 male)
ATGGCGTGCAAGACCGGTTCGGCGACGAACATCATCTACGGCCTTGCTCT
GGGGTACAAGTCGGCGATCATCCCCGTGTTCGTGCTGGCGGCCATCATCT
TCACGTCCTTCCAGCTCTGCGGAACTTACGATGGCGTGCAAGACCGGTTC
GGCGACGAACATCATCTACGGCCTTGCTCTGGGGTACAAGTCGGCGATCA
TCCCCGTGTTCGTGCTGGCGGCCATCATCTTCACGTCCTTCCAGCTCTGC
GGAACTTACGGTGTCGCCCTTGCCGCGATCGGCATGCTGTCCACGCTTGC
CACCGGACTGACGATCGACGCTTACGGCCCCGTCTGTGACAACGCCGGAG
GCATCGCCGAGATGGCCGAGCTCCCCCCCGAGGCGAGCGCGTGTTGCATG
CAGCAATGAGTGTCGCCCTTGCCGCGATCGGCATGCTGTCCACGCTTGCC
ACCGGACTGACGATCGACGCTTACGGCCCCGTCTGTGACAACGCCGGAGG
CATCGCCGAGATGGCCGAGCTCCCCCCCGAGGCGAGCGCGTGTTGCATGC
AGCAATGA
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