mRNA_M-pyrifera_M_contig114196.2956.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: L1JJV0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JJV0_GUITC) HSP 1 Score: 57.0 bits (136), Expect = 6.090e-8 Identity = 28/56 (50.00%), Postives = 33/56 (58.93%), Query Frame = 1
Query: 52 DAASGPLKPGDVGTIVQDDHSDLPYQVRAPDGRT------------WWYIPEALTR 183
DA GPLKP DVG IV+DD++ PY VRA D +T WWY+PE L R
Sbjct: 256 DAQFGPLKPEDVGVIVEDDNALKPYLVRALDSKTLKDGCPPEFVDTWWYLPEVLQR 311
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A1E7FG70_9STRA (HECT domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG70_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.970e-7 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 1 FSVGECVVLKSSFETARDAASGPLKPGDVGTIVQ-DDHSDLPYQVRAP-DGRTWWYIPEALTRE 186
F +GE V L S+E DA SGPL PG+ GTI++ L + +R + R WWY P+AL RE
Sbjct: 604 FQIGEKVELVLSYERFGDAVSGPLLPGNRGTIIELQGAQGLRHSIRVVYNSRRWWYQPQALVRE 667
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A7S1H0E7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H0E7_HEMAN) HSP 1 Score: 53.1 bits (126), Expect = 1.340e-6 Identity = 27/56 (48.21%), Postives = 30/56 (53.57%), Query Frame = 1
Query: 52 DAASGPLKPGDVGTIVQDDHSDLPYQVRAPDG------------RTWWYIPEALTR 183
DA GPL PGD+G I+QDD PY V+A D WWYI EALTR
Sbjct: 189 DADQGPLYPGDIGIILQDDGDTKPYLVKALDSVCYKAGYPYEWTDEWWYIAEALTR 244
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A7S3KWR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWR1_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 1.750e-5 Identity = 27/62 (43.55%), Postives = 35/62 (56.45%), Query Frame = 1
Query: 10 GECVVLKSSFETARDAASGPLKPGDVGTIV--QDDHSDLPYQVRAP-DGRTWWYIPEALTRE 186
G+ V L +E DAA GPL+PGD GT+V Q + +R +GR WWY P+AL E
Sbjct: 499 GDRVQLVEGYEKFGDAAGGPLRPGDRGTVVELQGSPNGESRSIRVIFNGRRWWYQPQALLSE 560
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A7S4V2Y8_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V2Y8_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 1.750e-5 Identity = 29/65 (44.62%), Postives = 36/65 (55.38%), Query Frame = 1
Query: 1 FSVGECVVLKSSFETARDAASGPLKPGDVGTI--VQDDHSDLPYQVRAP-DGRTWWYIPEALTRE 186
F VG+ V + +E DAASGPL+PG GT+ VQ VR +GR WWY P+AL E
Sbjct: 640 FEVGDKVEVSEGYERYGDAASGPLRPGYRGTVMEVQRGPRGDRQSVRVMHNGRRWWYQPQALLSE 704
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A812LNR2_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812LNR2_9DINO) HSP 1 Score: 49.3 bits (116), Expect = 3.270e-5 Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 1
Query: 10 GECVVLKSSFETARDAASGPLKPGDVGTIVQDDHSDLPYQVRAPDGRTWWYIPEAL 177
G+ V L +++ D G LKPG VGT+V+DD + P+ V P+G T WY A+
Sbjct: 2513 GDKVKLSKAYKQF-DGEDGCLKPGQVGTLVEDDRTSCPFLVEGPNGCTHWYNDGAI 2567
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A812UHU6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UHU6_9DINO) HSP 1 Score: 48.5 bits (114), Expect = 6.100e-5 Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 1
Query: 52 DAASGPLKPGDVGTIVQDDHSDLPYQVRAPDGRTWWYIPEAL 177
D G LKPG VGT+V+DD + P+ V P+G T WY A+
Sbjct: 1577 DGEDGCLKPGQVGTLVEDDRTSCPFLVEGPNGCTHWYNDGAI 1618
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Match: A0A7S1B5P1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5P1_9STRA) HSP 1 Score: 48.5 bits (114), Expect = 6.120e-5 Identity = 28/65 (43.08%), Postives = 33/65 (50.77%), Query Frame = 1
Query: 1 FSVGECVVLKSSFETARDAASGPLKPGDVGTI--VQDDHSDLPYQVRAP-DGRTWWYIPEALTRE 186
F G+ V L FE DA SGPL+PGD G++ VQ VR + R WWY P AL E
Sbjct: 193 FEAGDTVELSDDFEKYGDAGSGPLQPGDRGSVTEVQKCSDGETQSVRVVFNSRRWWYQPGALWSE 257 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114196.2956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114196.2956.1 >prot_M-pyrifera_M_contig114196.2956.1 ID=prot_M-pyrifera_M_contig114196.2956.1|Name=mRNA_M-pyrifera_M_contig114196.2956.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp FSVGECVVLKSSFETARDAASGPLKPGDVGTIVQDDHSDLPYQVRAPDGRback to top mRNA from alignment at M-pyrifera_M_contig114196:54..239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114196.2956.1 ID=mRNA_M-pyrifera_M_contig114196.2956.1|Name=mRNA_M-pyrifera_M_contig114196.2956.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=186bp|location=Sequence derived from alignment at M-pyrifera_M_contig114196:54..239+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114196:54..239+ >mRNA_M-pyrifera_M_contig114196.2956.1 ID=mRNA_M-pyrifera_M_contig114196.2956.1|Name=mRNA_M-pyrifera_M_contig114196.2956.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig114196:54..239+ (Macrocystis pyrifera P11B4 male)back to top |