mRNA_M-pyrifera_M_contig114169.2952.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A818TU73_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A818TU73_9BILA) HSP 1 Score: 62.4 bits (150), Expect = 5.180e-10 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVY 153
CT+C + K DTVL+PCGH+C+C+ C+ + G CPICR+ + VY
Sbjct: 427 CTVCFDRKRDTVLIPCGHICLCYSCADELYQRGTRQCPICRATITSINKVY 477
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: F2DKV7_HORVV (Predicted protein n=3 Tax=Eukaryota TaxID=2759 RepID=F2DKV7_HORVV) HSP 1 Score: 60.5 bits (145), Expect = 2.480e-9 Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVY 153
CTIC + DTVL+PCGH+C+C+ C+ + G CPICR+ + VY
Sbjct: 423 CTICLDRIRDTVLIPCGHICLCYSCADELHQRGSRQCPICRATITSINRVY 473
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A814TGJ0_9BILA (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A814TGJ0_9BILA) HSP 1 Score: 59.7 bits (143), Expect = 4.640e-9 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVY 153
CTIC ++ DTVL+PCGH+C+C++C+ + G CPICRS + +Y
Sbjct: 496 CTICFDHVRDTVLIPCGHICLCYLCAKELIEHGTKQCPICRSSIKLINKIY 546
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A819G522_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819G522_9BILA) HSP 1 Score: 58.2 bits (139), Expect = 1.620e-8 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVY 153
CTIC ++ DTVL+PCGH+C+C+ C+ + G CPICRS + +Y
Sbjct: 418 CTICLDHFRDTVLIPCGHICLCYSCAKELIEHGTKQCPICRSSIKLINKIY 468
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A816K5X1_9BILA (Hypothetical protein n=3 Tax=Rotaria TaxID=231623 RepID=A0A816K5X1_9BILA) HSP 1 Score: 58.2 bits (139), Expect = 1.620e-8 Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVY 153
CT+C ++ DTVL+PCGH+C+C+ C+ + G CPICR+ + +Y
Sbjct: 427 CTVCFDHLRDTVLIPCGHICLCYTCAKELVEHGTKQCPICRTSIQLINKIY 477
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A2P6NVE5_9EUKA (Serine/threonine protein kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NVE5_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 2.190e-8 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPV 132
C +C E MDTVL+PCGH+C+CH CS M CP+CRS +
Sbjct: 209 CKVCLERPMDTVLIPCGHICVCHQCSSNM-----GQCPMCRSVI 247
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A077ZZE8_STYLE (Copine viii n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZZE8_STYLE) HSP 1 Score: 57.8 bits (138), Expect = 2.220e-8 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQ 138
C IC NK +TVLVPCGH C+C CS +++ N+CPICR V Q
Sbjct: 729 CKICFSNKNNTVLVPCGHKCVCFECSSKIK----NICPICRKNVAQ 770
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A814JWS7_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814JWS7_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 3.020e-8 Identity = 21/51 (41.18%), Postives = 31/51 (60.78%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVY 153
C +C + +DTVL+PCGH+C+C C+ M G+ CPICR+ +Y
Sbjct: 404 CVVCLDRLIDTVLIPCGHLCLCFQCATAMHDKGNKTCPICRTTSTLCNRIY 454
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A4Z1T8W4_GIAMU (RING finger domain-containing protein n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1T8W4_GIAMU) HSP 1 Score: 55.1 bits (131), Expect = 3.720e-8 Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPV 132
C IC N DT+L PCGH+C+C C+GR+ + CP CR+P+
Sbjct: 39 CVICLMNPKDTLLQPCGHLCVCSTCAGRIM---NQTCPFCRTPI 79
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Match: A0A139AV24_GONPJ (RING-type domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AV24_GONPJ) HSP 1 Score: 56.2 bits (134), Expect = 7.720e-8 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 1 CTICEENKMDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPV 132
C +C NK+D+VLVPCGH +CH C+ ++Q G CP+CR+ V
Sbjct: 379 CKVCFSNKVDSVLVPCGHAVLCHACAAKVQYEGIG-CPVCRAKV 421 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114169.2952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114169.2952.1 >prot_M-pyrifera_M_contig114169.2952.1 ID=prot_M-pyrifera_M_contig114169.2952.1|Name=mRNA_M-pyrifera_M_contig114169.2952.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp MDTVLVPCGHMCICHVCSGRMQASGHNLCPICRSPVVQWQLVYR*back to top mRNA from alignment at M-pyrifera_M_contig114169:296..454- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114169.2952.1 ID=mRNA_M-pyrifera_M_contig114169.2952.1|Name=mRNA_M-pyrifera_M_contig114169.2952.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=159bp|location=Sequence derived from alignment at M-pyrifera_M_contig114169:296..454- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114169:296..454- >mRNA_M-pyrifera_M_contig114169.2952.1 ID=mRNA_M-pyrifera_M_contig114169.2952.1|Name=mRNA_M-pyrifera_M_contig114169.2952.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig114169:296..454- (Macrocystis pyrifera P11B4 male)back to top |