mRNA_M-pyrifera_M_contig114162.2950.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: E2A3F8_CAMFO (Breast cancer type 2 susceptibility protein-like protein n=3 Tax=Camponotus floridanus TaxID=104421 RepID=E2A3F8_CAMFO) HSP 1 Score: 58.9 bits (141), Expect = 1.880e-7 Identity = 44/140 (31.43%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 1 MFSTAGGRQLSVSAGALERAKALLQADGDVEMEELHDGE-----GEKEQRSDVTESLFATAGGRKLTVSKAAVARAQSLLGD-DDREADEKSSATEEATISAGLKGVKRKASGSEASGFSMFSTAGGRALRVSEKALKQA 402
+FSTA G +S+S +L +AK LL+ + + E + + + E G + ++VT SLF+TAGG+ + +SK ++ +A+ LL D ++E D ++++ I ++ + ++FSTA G+A+ +SEK+L +A
Sbjct: 442 LFSTASGNTISISEKSLAKAKMLLEDESEKENDIIKNYEKSFTGGNSTKSNNVTSSLFSTAGGKPINISKTSLTKAKILLADTSEKENDILIKYSDKSFIDG---------DSTKPNNMTLFSTAAGKAINISEKSLAKA 572
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: UPI0011443744 (breast cancer type 2 susceptibility protein homolog isoform X1 n=4 Tax=Formica exsecta TaxID=72781 RepID=UPI0011443744) HSP 1 Score: 57.0 bits (136), Expect = 8.810e-7 Identity = 45/144 (31.25%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 MFSTAGGRQLSVSAGALERAKALLQADGDVEME------ELHDGEGEKEQRSDVTESLFATAGGRKLTVSKAAVARAQSLLGDDDREADEKSSATEEATISAGLKGVKRKASGSEASG----FSMFSTAGGRALRVSEKALKQA 402
+FSTAGG+ +S+S +L +AK LL + + E E E + + ++T LF+TAGG+ + +S+ ++A+A+ LL D+ + +K L ++S E S +FSTAGG+++ +SEK+L +A
Sbjct: 446 LFSTAGGKPISISEKSLSKAKMLLADESEKENEILIKCPEKSFTDANSVKPDNITLPLFSTAGGKSINISEKSLAKAKRLLADESEKDSDK------------LIKYSERSSTDENSAKNITLPLFSTAGGKSINISEKSLAKA 577
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: UPI0010FB46C2 (breast cancer type 2 susceptibility protein homolog n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB46C2) HSP 1 Score: 55.8 bits (133), Expect = 2.240e-6 Identity = 41/140 (29.29%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 1 MFSTAGGRQLSVSAGALERAKALLQADGD------VEMEELHDGEGEKEQRSDVTESLFATAGGRKLTVSKAAVARAQSLLGDDDREADEKSSATEEATISAGLKGVKRKASGSEASGFSMFSTAGGRALRVSEKALKQA 402
+FSTAGG+ +++S +L +AK LL + + ++ E + + +++T +LF+TAGG+ + +S+ ++A+A+ LL D++++ D E++ + S + S ++FSTAGG+ + +SEK+L +A
Sbjct: 742 LFSTAGGKSINISEKSLAKAKKLLADEAENKNDMLIKYPEKSFTDVNSMESNNMTSTLFSTAGGKSINISEKSLAKAKKLLADEEKKNDISIKYPEKSFTD-----INSMESNNMTS--TLFSTAGGKPINISEKSLAKA 874
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: A0A2G8JP18_STIJA (Putative breast cancer type 2 susceptibility protein-like (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JP18_STIJA) HSP 1 Score: 53.1 bits (126), Expect = 1.820e-5 Identity = 52/140 (37.14%), Postives = 73/140 (52.14%), Query Frame = 1
Query: 4 FSTAGGRQLSVSAGALERAKALLQADGDV-EMEELHDGEGEKEQRSDVTESLFATAGGRKLTVSKAAVARAQSLLGDDDREADEKSSATEEATISAG--LKGVKRKAS----GSEASGFSMFSTAGGRALRVSEKALKQA 402
F TA G + VS ALE+AK L +G + E +E +R + S FATA G K+T+S ++ RA+ +L D D+E + + +SAG L G RK G A+G F T G+A+ +SE ALKQA
Sbjct: 282 FQTASGSHVKVSEAALEKAKRLWDDEGSIKESDERTGNPSSSHERLERCPSGFATASGGKVTISSTSLERAKDILTDGDKEMQMGQGSRK---LSAGQHLCGTSRKEDCPDVGRIATGG--FLTGKGKAVAISELALKQA 416
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: A0A4W4F401_ELEEL (Breast cancer type 2 susceptibility protein-like n=5 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4F401_ELEEL) HSP 1 Score: 52.4 bits (124), Expect = 3.620e-5 Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 4 FSTAGGRQLSVSAGALERAKALLQADGDV----EMEELHDGEGEKEQRSDVTESL--FATAGGRKLTVSKAAVARAQSLLGDDDREADEKSSATEEATISAGL-KGVKRKASGSEASGFSMFSTAGGRALRVSEKALKQ 399
FSTA G+ +SVSA AL+RAKA+L D + E+ + + E+RS + F+TA G+K+ VS A+ +A+SL + + E + + GL K + A+ E + FSTA G+++ VSEKAL +
Sbjct: 1047 FSTANGKTVSVSAEALQRAKAVLADSADTSPCEKRMEISEEKNVPEKRSTIPGRSWNFSTASGKKVAVSDKALRKAKSLFSECE---------VEGSLLDEGLSKTAETSATEPECARCLGFSTASGKSVAVSEKALME 1176
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: A0A3B1J8R5_ASTMX (BRCA2 DNA repair associated n=5 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J8R5_ASTMX) HSP 1 Score: 51.6 bits (122), Expect = 6.740e-5 Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 1
Query: 4 FSTAGGRQLSVSAGALERAKALLQADGDVEMEELHDGEGEKEQRSDVTE--------SL-FATAGGRKLTVSKAAVARAQSLLGDDDREADEKSSATEEATISAGLKGVKRKASGSEASGFSMFSTAGGRALRVSEKALKQA 402
FSTA G+ +SVSA AL++AKA+L E+ E++ + V + SL F+TA GRK+ +S A+ +A++L + + E + A + L + K GSE + FSTA G+ + VSEK LK+A
Sbjct: 1205 FSTASGKMVSVSAEALQKAKAVLDDSSAASPCEIKADVSEEKNKKGVPKTDTYIPGRSLGFSTASGRKVAISDRALEKAKNLFTEVEVE--------DLANNGSILNSAQTKPLGSEQTRCLGFSTASGKGVAVSEKTLKEA 1338
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Match: A0A0J7NXY3_LASNI (Breast cancer type 2 susceptibility protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NXY3_LASNI) HSP 1 Score: 51.2 bits (121), Expect = 8.970e-5 Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 1 MFSTAGGRQLSVSAGALERAKALL----QADGD--VEMEELHDGEGEKEQRSDVTESLFATAGGRKLTVSKAAVARAQSLLGDDDREADEKSSATEEATISAGLKGVKRKASGSEASGFSMFSTAGGRALRVSEKALKQA 402
+FSTA G ++VS AL +AK LL + D D ++ E +G + +++T LF+TAGG+ + +S+ ++A+A+ LL D+ + ++ S + + + + K+ S+FSTA G+ + +SEK+L +A
Sbjct: 397 LFSTASGAPINVSKEALSKAKTLLADESEKDNDKLIKYSERSSIDGNSMKPNNITLPLFSTAGGKPINISEKSLAKAKMLLADESEKENDISIKYPQKSFT-DVNTTKQNDMT-----LSLFSTAAGKPVNISEKSLAKA 530 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114162.2950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114162.2950.1 >prot_M-pyrifera_M_contig114162.2950.1 ID=prot_M-pyrifera_M_contig114162.2950.1|Name=mRNA_M-pyrifera_M_contig114162.2950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp MFSTAGGRQLSVSAGALERAKALLQADGDVEMEELHDGEGEKEQRSDVTEback to top mRNA from alignment at M-pyrifera_M_contig114162:55..456- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114162.2950.1 ID=mRNA_M-pyrifera_M_contig114162.2950.1|Name=mRNA_M-pyrifera_M_contig114162.2950.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig114162:55..456- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114162:55..456- >mRNA_M-pyrifera_M_contig114162.2950.1 ID=mRNA_M-pyrifera_M_contig114162.2950.1|Name=mRNA_M-pyrifera_M_contig114162.2950.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig114162:55..456- (Macrocystis pyrifera P11B4 male)back to top |