mRNA_M-pyrifera_M_contig114143.2944.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A7S4WHF5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WHF5_9DINO) HSP 1 Score: 62.0 bits (149), Expect = 1.160e-8 Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = 1
Query: 1 AYVGEMLVRDVRWLLTNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDL--YDSRHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLKVPAD--MCAILRAAVAESTRRNYHG 399
A + E VR VRWLL ++P L +V+ R+ +FE +S LL+FQA+FL +VA L YD + G+ T L+ + I + + +Y LGL+ P + + L AAV +S + YHG
Sbjct: 102 AVLAESHVRGVRWLLRDRPRLQCAVSAE----DRLRWSFEGRATSSRLLMFQAFFLRRVARPAGETLAASLARYDRQFGQPTAPQRERLVRACREILRVDGWPAVYEGLGLRAPEEQELAEELCAAVHQSLQLGYHG 234
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: L8GGI3_ACACA (Ubiquitinconjugating enzyme subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGI3_ACACA) HSP 1 Score: 61.6 bits (148), Expect = 2.060e-8 Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 4 YVGEMLVRDVRWLLTNQPHLNTSVADSKIDRSRVEL--TFEASFSSYSLLLFQAYFLEKVAL--SMPIKELTDLYDSRHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLKVPA--DMCAILRAAVAESTRRNYH 396
++GE+ VR+VRW+L + PHL +S + + +F + S L++FQ YFL+ + + ++ Y GR T M + L K I + S+DE + R+ + + + A L +A+AES RNYH
Sbjct: 394 FLGELFVRNVRWILQDAPHLAHIHTGRGGGQSALMIDDSFTCTLVSRRLVMFQVYFLKNIGRPNNQSWRDSLTTYHRTMGRPTHSMKAHLHAASKAIMAVASWDEYFDRIWMPRMSGPQLTARLGSAIAESAARNYH 530
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A812U5T9_SYMPI (UBC5B protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812U5T9_SYMPI) HSP 1 Score: 61.2 bits (147), Expect = 2.740e-8 Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 13 EMLVRDVRWLLTNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDL----YDSRHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLK--VPADMCAILRAAVAESTRRNYH 396
E+ R+V W+L PHL ++D+ + R R+ TF+A+ S L++F A+FL KVA P + +D Y+ G + ++ +TI + S++ + LG++ P +C LR +V S ++ YH
Sbjct: 396 EVFDRNVLWVLKKYPHL-AQLSDAGVSRERLRATFQAALVSMRLIMFNAWFLNKVA--KPSADTSDSALARYERTKGVPPRHQIEAVHRAVRTICEVDSWEAYFDSLGVERVKPEQLCNWLRQSVRNSAQKGYH 526
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A370TTC8_9HELO (UBC core domain-containing protein n=1 Tax=Venustampulla echinocandica TaxID=2656787 RepID=A0A370TTC8_9HELO) HSP 1 Score: 58.2 bits (139), Expect = 3.330e-7 Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 7 VGEMLVRDVRWLL----TNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDLYDS---RHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLKVP--ADMCAILRAAVAESTRRNY 393
+ E + R+V W+L N P L+ + ++ R++ TF+AS +SY LL+F F K A+ P K LT L D RHG L K I ++S+ +R + L+ P A A L++ + ES ++ Y
Sbjct: 476 IKETITRNVVWMLDKRGANMPELSY-IEPNEGSNYRLQQTFQASKTSYRLLMFLNLF-RKTAVGHPRKPLTQLRDEAFIRHGAPPMGSAKGLADSIKRIHEVESFPAFFRAMDLETPQEAQFTAFLKSTIVESVKKGY 611
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A8H4QVP5_9AGAR (UBC core domain-containing protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QVP5_9AGAR) HSP 1 Score: 58.2 bits (139), Expect = 3.360e-7 Identity = 44/137 (32.12%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 4 YVGEMLVRDVRWLLTNQPHLNT-SVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDLYDSRHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRL----GLKVP-ADMCAILRAAVAESTRRNYH 396
++ E + R+VRW L P L V +SK R+ TF AS +S+ L++FQ FL++ + L+ L D +G ++ ++ E K I + ++ E +RR+ GL + A C +LRA V S NYH
Sbjct: 566 FLEEAITRNVRWALAAVPELEVMEVGESKF---RLSNTFNASKTSFRLMMFQITFLDEF-VGTYASNLSKL-DDNYGFVDKELPERMVAEVKKIYKVDNWTEFFRRVRFTQGLSLSNAQFCDMLRATVKRSVAFNYH 697
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A066X529_COLSU (F-box domain-containing protein n=1 Tax=Colletotrichum sublineola TaxID=1173701 RepID=A0A066X529_COLSU) HSP 1 Score: 56.6 bits (135), Expect = 1.140e-6 Identity = 43/141 (30.50%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 1 AYVGEMLVRDVRWLL----TNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDLYDS---RHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLG---LKVPADMCAILRAAVAESTRRNY 393
A + E + R+V W+L N P L+ D ++ R++ TFEAS +SY LL+F F ++A K L + D RHG L E + + + ++ +R +G L P + ++LRA V ES +R Y
Sbjct: 441 AIITEAITRNVVWMLDKTGANMPELSYLEPD-RVSGYRLKKTFEASRTSYRLLMFSELF-RRIARPSRDKTLVQVRDELFDRHGAPPPGAALQLSSEVRRLHDVDNFPHFFREMGIMNLPTPENFTSVLRACVRESMQRGY 579
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A3D8S3Z4_9HELO (UBC core domain-containing protein n=1 Tax=Coleophoma crateriformis TaxID=565419 RepID=A0A3D8S3Z4_9HELO) HSP 1 Score: 56.6 bits (135), Expect = 1.150e-6 Identity = 41/136 (30.15%), Postives = 63/136 (46.32%), Query Frame = 1
Query: 1 AYVGEMLVRDVRWLLTNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDLYDS---RHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLKVPAD--MCAILRAAVAESTRRNY 393
+ + E + R+V W+L ++P L+ S + R+E TFEAS +SY LL+F F + A+ P K L L D RHG L KTI + ++ + R +G+ P LR + S + Y
Sbjct: 483 SIIKEAVTRNVVWMLESRPELSY-YEPSAVSPYRLEKTFEASTTSYRLLMFLNLF-RRTAVGSPRKSLIQLRDETFQRHGAPPRGSAKGLADAIKTIHSVNNFPDFLRTMGIAPPTAEWFTGFLRECIKSSMAKGY 616
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A1D9QG25_SCLS1 (Uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) TaxID=665079 RepID=A0A1D9QG25_SCLS1) HSP 1 Score: 56.2 bits (134), Expect = 1.550e-6 Identity = 41/134 (30.60%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 7 VGEMLVRDVRWLLTNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDLYDS---RHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLKVPAD--MCAILRAAVAESTRRNY 393
+ E + R+V W+L QP L+ + S++ + R+E TFEAS +SY +L+F F + A+ P K L+ L + RHG L K I ++ S+ + +R +G+ V D LR + +S + Y
Sbjct: 444 IKEAITRNVVWMLGEQPGLSY-IEPSEVSQYRLEKTFEASKTSYRILMFLKIF-KTTAIGKPKKPLSQLANEAFKRHGAPPRGSARYLADWTKRIHLIASFPDFFRVMGMGVRQDSWFTNFLRECINDSIEKGY 575
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A4U6XKM4_9PEZI (UBC core domain-containing protein n=1 Tax=Colletotrichum tanaceti TaxID=1306861 RepID=A0A4U6XKM4_9PEZI) HSP 1 Score: 55.5 bits (132), Expect = 2.870e-6 Identity = 42/140 (30.00%), Postives = 69/140 (49.29%), Query Frame = 1
Query: 1 AYVGEMLVRDVRWLL----TNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYF--LEKVALSMPIKELTDLYDSRHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGL-KVPAD--MCAILRAAVAESTRRNY 393
A + E + R+V W+L N P L+ D K+ R++ TFEAS +SY LL+F F + + + +++L D RHG L E + + + ++ +R +G+ VP ++LR +V ES RR Y
Sbjct: 430 AIITEAITRNVVWMLDRRGANMPELSYLEPD-KVSGYRLKKTFEASRTSYRLLMFSELFRRIARPSADTSLEQLRDELFDRHGAPPPGAALRLSSEVRRLHDVDNFPHFFREMGITNVPTAERFTSVLRDSVRESMRRGY 568
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Match: A0A3D8R7C0_9HELO (UBC core domain-containing protein n=1 Tax=Coleophoma cylindrospora TaxID=1849047 RepID=A0A3D8R7C0_9HELO) HSP 1 Score: 55.1 bits (131), Expect = 3.960e-6 Identity = 41/136 (30.15%), Postives = 62/136 (45.59%), Query Frame = 1
Query: 1 AYVGEMLVRDVRWLLTNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFLEKVALSMPIKELTDLYDS---RHGRGTDQMVSSLIVEFKTIKMMKSYDELYRRLGLKVPAD--MCAILRAAVAESTRRNY 393
+ + E + R+V W+L + P L+ S + R++ TFEAS +SY LL+F F + A+ P K L L D RHG L KTI + S+ R +G+ P + LR + S + Y
Sbjct: 483 SIIKEAVTRNVVWMLESHPELSY-YEPSAVSPYRLKKTFEASTTSYRLLMFLNLF-RRTAVGSPRKSLIQLRDEAFQRHGAPPRGSAKGLANAIKTIHSVNSFPAFLRTMGIAPPTAEWFTSFLRECIKSSMAKGY 616 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114143.2944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114143.2944.1 >prot_M-pyrifera_M_contig114143.2944.1 ID=prot_M-pyrifera_M_contig114143.2944.1|Name=mRNA_M-pyrifera_M_contig114143.2944.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp MLVRDVRWLLTNQPHLNTSVADSKIDRSRVELTFEASFSSYSLLLFQAYFback to top mRNA from alignment at M-pyrifera_M_contig114143:25..429- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114143.2944.1 ID=mRNA_M-pyrifera_M_contig114143.2944.1|Name=mRNA_M-pyrifera_M_contig114143.2944.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig114143:25..429- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114143:25..429- >mRNA_M-pyrifera_M_contig114143.2944.1 ID=mRNA_M-pyrifera_M_contig114143.2944.1|Name=mRNA_M-pyrifera_M_contig114143.2944.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig114143:25..429- (Macrocystis pyrifera P11B4 male)back to top |