mRNA_M-pyrifera_M_contig11410.2938.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: D7G254_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G254_ECTSI) HSP 1 Score: 258 bits (658), Expect = 4.350e-72 Identity = 153/278 (55.04%), Postives = 182/278 (65.47%), Query Frame = 1
Query: 1156 HCWNDLLQSPLMEGCFAGALDAVKALLPRLSVRQINLRDKIISANQGGTTALLAAITCGKNE--------IGLVEALLEAGADPKIRMASTNISPLEIVASDKEVATDPTLGPSLVRALTEAGADVNGVGP-KGRTALHLACHGVACGEVVQALLNAGADARAPCAGMQFLTPLQLAGHGGNVEALRVLIVRPECKGLDAVGAPPERATTLSLAVGTGKSEAVRFLLEKGADMDLLPF---EADGFTPR-AQSLIHIAINEGHVDIARLLLQARRLKE 1950
HCWN L+ PL C +G L AV+ LLPRLS RQIN+RD++ A+ GG T L+AA+ E + +VEALL AGADP +R A ++PLE VA PTLGPSLVR L AGADVN VG +G T L AC AC EV+QALL+AGADA APCAGM+F+TPLQLAG GGN EA+ VLI RPEC GL+ VG P RAT L+ AV G +E RFLLE+GADMDLLP EA G P A SL+ A GH+D LL+QA+ K+
Sbjct: 493 HCWNGHLRPPLTVACMSGRLGAVELLLPRLSPRQINMRDRVSGADDGGVTPLVAAVWYACEEXXXXXXEALRIVEALLAAGADPTLR-AFRGMTPLESVARGASTKASPTLGPSLVRMLVAAGADVNEVGSTRGCTPLQFACMEGACAEVIQALLDAGADACAPCAGMRFMTPLQLAGGGGNAEAVEVLIGRPECGGLNTVGCLPSRATALACAVKHGSTEVCRFLLERGADMDLLPSSSSEAGGGKPLPATSLVEFAAQCGHLDTMNLLIQAKVFKD 769
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: D7G253_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G253_ECTSI) HSP 1 Score: 217 bits (553), Expect = 1.740e-57 Identity = 200/581 (34.42%), Postives = 268/581 (46.13%), Query Frame = 1
Query: 298 MAEGLLHRGADVNIS--DASGHTPLMLAMENLPLMRV--LVALGTKPSTDQAALYVEQCRGDKRREEVLDLLVAEGW---CP-----RFLNSSGDFSDVAAFSAATATAAAHSGTP-QSLGWTSQRLGTGRSLTEVVGDMIFSSSFSRTTNVNHLARAPIAYVASQVRAAAGDEGRRPIHLAAASDRVGAINALPRINTGMTKSRDSGSCTSPHSAAEVGHAPAVAA---SGVVPDLTDCKGLSALDMAVINGCRAAALTLLIEGASPTPPGVSGKTAVHLACEHNAPKMVELLLRFGALPGHCWNDLLQSPLMEGCFAGALDAVKALLPRLSVRQINLRDKIISANQGGTTALLAAITCG--KNEI-GLVEALLEAGADPKIRMASTNISP--------LEIVASDKEVATDPTLGPSLVRALTEAGADVNGVG-PKGRTALHLACHGVACGEVVQALLNAGADARAPCAGMQFLTPLQLA-GHGGNVEALRVLIVRPECKGLDAVGAPP-ERATTLSLAVGTGKSEAVRFLLEKGADMDLLPFEADGFTPRAQSLIHIAINEGHVDIARLLLQARRLKE 1950
MA L++RGADVN D TPL+LA+ + M + ++ LG KP + ++ G K E VL+LLV GW P S D ++V T + +G P +T ++L+ V G + S NVN A G +G +HLAA R + AL R + D+ T+ A H AV +G + D G + L AV A GHCWN+ LQ+PL+ C G L AV+ LLP LS RQ+N+R S + G T L AAITC K EI +VEALL+ GAD ++ + +S LE VA D+ +A PT+GP +VRAL GAD+N + + LH AC AC EV+Q LL+ GAD PC + L PL LA G GGN+ A+R+L+ GL+AV PP +RAT L LAV +E VRFLLE+GADMD++P E DG TP S+I A G +D LL+QA+ +E
Sbjct: 208 MAVALINRGADVNKGSPDDPNETPLILALRSQKCMILAQMLKLGEKPPAPVVEMCMKHLEGSKGNEVVLELLVNAGWGRSAPDDARTETAERSRDINEVLRAVPPTGSEYPSTGNPVPGQTYTLHDAVRSKNLSAVEGLL------STVRNVN----------------AVGTDGGTALHLAATMGRDDIVEALIRTTGILVDKVDNHKRTALFRAVSANHVEAVKTLLKAGASCNDRDRFGYTPLRQAVKRPAGAIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHCWNESLQTPLLVACKRGNLSAVRLLLPHLSERQVNMRS---STDSGAETPLSAAITCEPPKMEIVDIVEALLKNGADLHMQKSGNGVSAIFTALILKLEGVAVDR-IAAHPTIGPRVVRALVAGGADINDMTFASAYSPLHAACIEGACAEVIQELLDLGADVDVPCVSVSSLAPLHLAAGFGGNIGAIRLLMGLRNSGGLNAVAPPPNDRATILYLAVQNNMTEVVRFLLEEGADMDMMPNEDDG-TPSKSSMIEYAAFAGSLDSMNLLIQAKMFRE 761
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: A0A6H5LA13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA13_9PHAE) HSP 1 Score: 117 bits (292), Expect = 2.500e-23 Identity = 96/267 (35.96%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 1156 HCWNDLLQSPLMEGCFAGALDAVKALLPRLSVRQINLRDKIISANQGGTTALLAAITCGKNEIGLVEALLEAGADPKIRMASTNISPLEIVASDKEVATDPTL-GPSLVRALTEAGADVNGVGPKGRTALHLACHGVACGEVVQALLNAGADARAPCAGMQFLTPLQLAGHGGNVEALRVLIVRPECK-GLDAVGAPPERATTLSLAVGTGKSEAVRFLLEKGADMDLLPFEADGFTPRAQSLIHIAINEGHVDIARLLLQARRLKE 1950
HC N+ +SPL G + AVKALLPRL+ RQ+N R + GG TAL LLEAG D R + S L + + PT S+V+ L + GAD KG LH AC VVQ LL+ GA PC G +FL P+ +A H + + +RVL GL+ P +R + L++A+ G E VR LLE GA ++ + DG + S +H+A+ +G DI LLLQA KE
Sbjct: 1106 HCLNEARESPLHAAVIGGHVGAVKALLPRLTKRQVNRRTR------GGKTAL--------------PHLLEAGGDHTER-GILDRSCLTVAVA----GVQPTRRSASVVQVLLKWGADPTSFCAKGFNPLHHACASGVDPAVVQVLLDGGAAVETPCLGYRFLLPIHMAVHNEHADVVRVLTENSGVACGLNQKD-PAQRISPLTMAISNGDVETVRVLLEAGALLEENTLDVDGVA-KLGSHVHVALRKGQGDICLLLLQAMAFKE 1345
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: D7FVJ8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ8_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.080e-22 Identity = 97/269 (36.06%), Postives = 126/269 (46.84%), Query Frame = 1
Query: 1156 HCWNDLLQSPLMEGCFAGALDAVKALLPRLSVRQINLRDKIISANQGGTTALLAAITCGKNEIGLVEALLEAGADPKIRMASTNISPLEIVASDKEVATDPTLGPSLVRALTEAGADVNGVGPKGRTALHLACHGVACGEVVQALLNAGADARAPCAGMQFLTPLQLAGHGGNVEALRVLIVRPECKGLDAVGA----PPERATTLSLAVGTGKSEAVRFLLEKGADMDLLPFEADGFTPRAQSLIHIAINEGHVDIARLLLQARRLKE 1950
HC N+ +SPL G L AVKALLPRL+ RQ+N R + GG TAL+ A+ G + +V+ LLEAG D R VA K S+V+AL + GAD KG LH AC VVQALL+ GA PC G +FL P+ +A H + + +RVL E G+ A G P R + LE GA ++ + DG T S +H+A+ +G DI LLLQA KE
Sbjct: 1299 HCLNEARESPLHAAVTGGHLGAVKALLPRLTKRQVNKRTR------GGKTALMLAVQAGDSN--MVDLLLEAGGDHTERDILDRSCLTVAVAGVKPTRRSA----SVVQALLKWGADPTSFCAKGFNPLHHACASGVDPAVVQALLDGGAAVDTPCPGYRFLLPIHMAVHNEHTDVVRVLT---ETSGV-ACGLNQKDPVRRISPXXXXXXXXXXXXXXXXLEAGALLEENTLDVDGVT-NLGSHVHVALGKGQGDICLLLLQAMAFKE 1550
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: A0A6H5L536_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L536_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 5.770e-9 Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1156 HCWNDLLQSPLMEGCFAGALDAVKALLPRLSVRQINLRDKIISANQGGTTALLAAI 1323
HCWN+ L+ PL C +G L AV+ LLPRLS RQIN+RD++ + GG T L+AA+
Sbjct: 383 HCWNEYLRPPLTVACMSGRLGAVELLLPRLSPRQINMRDRVSGVDDGGVTPLVAAV 438
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: A0A2V8L3T8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8L3T8_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 7.510e-7 Identity = 99/345 (28.70%), Postives = 150/345 (43.48%), Query Frame = 1
Query: 994 AVINGCRAAALTLLIEGASPT-PPGVSGKTAVHLACEHNAPKMVELLLRFGA-LPGHCWNDLLQSPLMEGCFAGALDAVKALLPR-LSVRQINLRDKIISANQGGTTALLAAITCGKNEIGLVEALLEAGADPKIRMASTNISPLEIVASDKEVATDPTLGPSLVRALTEAGADVN-------------GVGPKGRTALHLACHGVACGEVVQALLNAGADARAPCAGMQFLT------PLQLAGHGGNV--------EALRVLIVRPECKGL--DAVGAPPERATTLSLAVGTGKSEAVRFLLEKGADMDLLPFEADGFTPR--AQSLIHIAINEGHVDIARLL 1926
AV G AA L+ GA+ G+TA+ A + P++V+LL+ GA + D +PL+ G +++ + LL V + +D++ TAL+ A G NE ++ LLE GA+P + + L ASD++ +V+AL GA+ N GV KG T L LA + E V+AL+ GAD F+T PL +A GGN E + V GL D A + T L A G VRFL+EKGA M++ F+ G TP A ++I + +N+ + +R++
Sbjct: 1 AVDKGNADAARALVDHGANVNVKESRGGQTALMWAAANKHPEIVKLLVEHGADVRARSKGDF--TPLLFAAQQGDVESGRTLLGAGADVNENRRKDRM--------TALMVAAASGNNEFSVL--LLEKGANPDLA-DEIGYTALHYAASDEKRV-------DVVKALLAHGANPNARTTRDAPRTNNSGVSSKGATPLFLAAS-LGNVETVRALIAGGAD--------PFVTTDEKTAPLHVATWGGNPYNRDWTEEEKKNLFEVTKLLLGLGADVNSAGEQGWTALHGAAYKGLDSVVRFLVEKGAKMEV--FDEYGQTPLSIANAVITVGVNDYYYQSSRVV 314
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Match: A0A8J6E6N2_9EUKA (Ankyrin repeats (3 copies) n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E6N2_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 4.940e-6 Identity = 92/321 (28.66%), Postives = 144/321 (44.86%), Query Frame = 1
Query: 1039 EGASPTPPGVSGKTAVHLACEHNAPKMVELLLRFGALPGHCWNDLLQSPLME-GCFAGALDAVKALLPRLSVRQINLRDKII--SANQGGTTALL---------AAITCG--------KNEI-GLVEALLEAGADPKIRMASTNISPLEIVASDKEVATDPTLGPSLVRALTEAGADVNGVGPKGRTALHLACHGVACGEVVQALLNAGADARAPCAGMQFLTPLQLAGHGGNVEALRVLI-VRPECKGLDA-VGAPPERATTLSLAVGTGKSEAVRFLLEKGADMDLLPFEADGFTPRAQSLIHIAINEGHVDIARLLLQ 1932
EG +P P + +A H+ + V LL GALP + S L+E C AGA +A +AL+ + N RD+++ +A+ G TALL AA G +N++ L+EAL+ P + +TN I A + T + + L +AGAD++ +G TALH+A V+ LL+ GAD +F G N E +++L+ PE + +G P ++ A+G G+ E+VR LLE G D +L A G +LI+ A H+ + LL++
Sbjct: 518 EGTTPAPL----LKKMFVAVSHDNGEEVRKLLTAGALPTDVYKG---STLLEHACEAGAAEAARALIDAGA----NPRDQLLRAAADGHGDTALLCLDRGADVNAADPSGDLPLHIAVRNDLFDLLEALIGR---PDCEINATNDR--NITALFSACSRGKT---NALELLIKAGADLDIPSVQGYTALHVAAKDRNAA-FVRMLLDGGADCTKLQGPARFSVLDIAVGQASNAEVIKMLLEAEPELRDRPCGMGTMP-----INTAMGLGRLESVRALLEHGVDPNLTVTAAAGGNAGELTLINFASFINHIGLLELLIE 813 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11410.2938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11410.2938.1 >prot_M-pyrifera_M_contig11410.2938.1 ID=prot_M-pyrifera_M_contig11410.2938.1|Name=mRNA_M-pyrifera_M_contig11410.2938.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=650bp AAECRDISAFGPEGCPPLHLGAHEGHVAVVHKLLALGAQLDARSVEGSTAback to top mRNA from alignment at M-pyrifera_M_contig11410:643..4558+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11410.2938.1 ID=mRNA_M-pyrifera_M_contig11410.2938.1|Name=mRNA_M-pyrifera_M_contig11410.2938.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3916bp|location=Sequence derived from alignment at M-pyrifera_M_contig11410:643..4558+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11410:643..4558+ >mRNA_M-pyrifera_M_contig11410.2938.1 ID=mRNA_M-pyrifera_M_contig11410.2938.1|Name=mRNA_M-pyrifera_M_contig11410.2938.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3900bp|location=Sequence derived from alignment at M-pyrifera_M_contig11410:643..4558+ (Macrocystis pyrifera P11B4 male)back to top |