mRNA_M-pyrifera_M_contig114053.2928.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A5A8CUE3_CAFRO (DRIM domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUE3_CAFRO) HSP 1 Score: 119 bits (297), Expect = 1.190e-27 Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 37 AMRAAAALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
A+RAA A+L S Q++A++ V+ ++ R AL LL AV++R++++PEVYD MD V +R +P++RT++SRL L FL YP+ D RLR HL FFLRNL+Y GRLA L L + R P A L + + +L +L D CRAAA A++ L
Sbjct: 3519 AVRAATAVLLHVPTARPSSAQVRAMLSVIRPDLTAPSRQGAALALLRAVVTRRMVAPEVYDAMDDVARMMVRSLQPASRTKASRLFLLFLMNYPLTDARLRAHLAFFLRNLDYSEPHGRLAVLDVLTTVAGRFPVAALDREGPVMFVAVLTKLASDSDPRCRAAAGAMISML 3690
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A6J1SMN0_FRAOC (small subunit processome component 20 homolog n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SMN0_FRAOC) HSP 1 Score: 105 bits (262), Expect = 5.740e-23 Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 22 EILTRAMRAAAALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECR 522
+++ A +A A L++ + T+S+EQLKAL+ E ++ +H A LL A++SRKL+ PE++DVMDKV +I P R ++ + +FL YP+ ++L GHL F+L L Y GR +AL+ + +++T P L+ HS L L RLV D + ECR
Sbjct: 2247 DLVVAAFKAVAVLVRDVKYHTLSQEQLKALLLYAEQDLSDANKHATAFALLKAILSRKLVVPEIHDVMDKVATLSITSDLPHVRVQARVVFHQFLMDYPL-GKKLEGHLSFYLSQLNYELQPGRESALEMVNSVITSFPVHVLSNHSGLFFLMLGARLVNDDAPECR 2412
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: I0YZQ7_COCSC (ARM repeat-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZQ7_COCSC) HSP 1 Score: 101 bits (252), Expect = 1.260e-21 Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 1
Query: 52 AALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTT--HSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
AALL+S ++ QL+AL+ +V V A LL A+++R+L+ EVY +M +V+ I S R + S +LL FL YP+ ++RL HLDF + NLE+ GR AA+ A++A++ + P L +S LPL+ RLV DPS +CRA L+AL
Sbjct: 2340 AALLRSCESYKPTQGQLRALLATAFVDVEAAANTVAAFNLLKAILARRLMLEEVYQLMKRVQELMISSHSASVRAQCSAILLMFLLDYPLGEQRLEHHLDFLVANLEFEHESGREAAIDAMIAVIQKFPEEVLVKKDRASAFFLPLVARLVSDPSPKCRALVGRALKAL 2508
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A2P6VR64_9CHLO (Small subunit processome component 20-like protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VR64_9CHLO) HSP 1 Score: 101 bits (252), Expect = 1.260e-21 Identity = 59/141 (41.84%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 130 EVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
E G G+++ A LL A+++RKL+ PEVYD+M++V+ +R R S LL+FL YP+ ++RL+ HL F L N Y GR AAL L ++T+ P A ++ + I LPL+ RLV DPS +CRA A L L
Sbjct: 2429 EEGAGRQN--AFHLLKAILARKLVMPEVYDLMNRVQELMVRSQAAPVRAACSSALLQFLLDYPLGEKRLQEHLQFLLTNAGYEHESGREAALDMLTVVLTKFPEALVSQWAEMIFLPLVARLVNDPSSKCRAMVGAALAVL 2567
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A8J9REP7_9CHLO (Probable small subunit processome component 20 homolog n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9REP7_9CHLO) HSP 1 Score: 100 bits (250), Expect = 2.300e-21 Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 52 AALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
AALL+S QL+ L+ +V V A LL AVI+R+L+ PEVYD+M +V+ I+ S R + S +LL FL YP+ RL HL+F + N + GR AAL A+LA++ + P + L T + +PL+ RLV DPS +CRA L+AL
Sbjct: 1779 AALLRSCSSYKPKEGQLRDLLARAFADVEAAANTVAAFNLLKAVIARRLVLPEVYDLMSRVQELMIKSHSASVRAQCSAILLAFLLDYPLGGARLSHHLNFLVANAGFEHEAGRAAALDAMLAVIQKFPDSLLETWAPVFFVPLVARLVSDPSPKCRALVGRTLKAL 1945
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A835W190_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W190_CHLIN) HSP 1 Score: 100 bits (250), Expect = 2.350e-21 Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 52 AALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
AALL+ + + QL+ L++ +++G + LL A++ R+++ PEVYDVM++V+ +R + R+ LL FL +P+ RL+ H+ F L NLEY GRLAAL L +V + PS L S +L+PL+VRLV D S + RAA+ VLR+L
Sbjct: 2972 AALLRDCAAYSPTTAQLRFLLRWAFEDLGEAGSQPTSFALLRALLGRRVVLPEVYDVMERVQQIMVRSQSAAVRSCCGAALLAFLLDFPLGPARLKAHVGFLLANLEYEYESGRLAALDMLGQVVAKFPSEVLQAQSDLLLMPLVVRLVNDSSSKARAASGDVLRSL 3138
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A2K3DBV4_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DBV4_CHLRE) HSP 1 Score: 100 bits (250), Expect = 2.350e-21 Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 52 AALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
AALL+ + + QL+ L++ +++G + LL A++ R+++ PEVYDVM++V+ +R + R+ LL FL +P+ RL+ H+ F L NLEY GRLAAL L +V + PS L S +L+PL+VR+V D S + RAAA VLR+L
Sbjct: 3018 AALLRDCAAYSPTTAQLRFLLRWAFEDLGEAGSQPTSFALLRALLGRRVVLPEVYDVMERVQQIMVRSQSAAVRSCCGAALLAFLLDFPLGPARLKSHVGFLLANLEYEYESGRLAALDMLGQVVAKFPSELLQAQSDLLLMPLVVRMVNDSSSKARAAAGDVLRSL 3184
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: D8LFK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK0_ECTSI) HSP 1 Score: 100 bits (249), Expect = 2.970e-21 Identity = 62/156 (39.74%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 85 VSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
+S +QL+AL+ V++ V + L+ AV++R+++ PEVYD+M K+ A+ RP+ R S + L FL YP+ ++RL+ HL+ + + Y +GRLAAL L+ RLP L SS L L+VRLV D + ECRAAAS +R L
Sbjct: 436 LSPKQLRALLVVLQMAVAETEHQNATFALMKAVVARRVMLPEVYDIMTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIVSGVSYEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAGECRAAASTAVRTL 591
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A836B6V6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B6V6_9CHLO) HSP 1 Score: 100 bits (249), Expect = 3.200e-21 Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 52 AALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
AALL+ + + QL+ L++ +++G + LL A++ R+++ PEVYDVM++V+ +R S R+ S LL FL +P+ RL+ H+ F L NLEY GRLA L L +V + P+ L S +L+PL+VR+V D S + RAAA VLR+L
Sbjct: 3013 AALLRDCDAYSPTTAQLRFLLRWAFEDLGEAGSQPTSFALLRALLGRRVVLPEVYDVMERVQQIMVRSQSASVRSCCSAALLAFLLDFPLGPARLKQHVGFLLANLEYEYESGRLAVLDMLGQVVAKFPAEVLQAQSDLLLMPLVVRMVNDSSAKARAAAGDVLRSL 3179
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Match: A0A8J4F954_9CHLO (Uncharacterized protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F954_9CHLO) HSP 1 Score: 100 bits (248), Expect = 3.890e-21 Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 52 AALLQSQRQMTVSREQLKALVQVVEDEVGVGKRHVVALQLLHAVISRKLLSPEVYDVMDKVRVAAIRDARPSTRTRSSRLLLRFLTTYPMEDRRLRGHLDFFLRNLEYPTIQGRLAALQALLALVTRLPSATLTTHSSRILLPLLVRLVQDPSLECRAAASAVLRAL 552
AALL+ + Q++ L++ +++G A LL A++SR+++ PEVYDVMD+V+ +R R LL+FL +P+ +RL+ H+ F L NLEY GRL L L +V + P L H+ +L+PL+VRLV D S + RAA +LRAL
Sbjct: 168 AALLRDCEAYQPTTAQVQYLLRWAFEDLGEAGAQPTAFALLRALLSRRVVVPEVYDVMDRVQQIMVRSQSAPVRNACGVALLQFLLDFPLGPQRLKQHVGFLLANLEYEYESGRLQVLDMLAQVVAKFPVEVLQAHADVLLMPLIVRLVSDTSAKARAATGDLLRAL 334 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114053.2928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114053.2928.1 >prot_M-pyrifera_M_contig114053.2928.1 ID=prot_M-pyrifera_M_contig114053.2928.1|Name=mRNA_M-pyrifera_M_contig114053.2928.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp SSSTTSAEILTRAMRAAAALLQSQRQMTVSREQLKALVQVVEDEVGVGKRback to top mRNA from alignment at M-pyrifera_M_contig114053:8..559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114053.2928.1 ID=mRNA_M-pyrifera_M_contig114053.2928.1|Name=mRNA_M-pyrifera_M_contig114053.2928.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig114053:8..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114053:8..559+ >mRNA_M-pyrifera_M_contig114053.2928.1 ID=mRNA_M-pyrifera_M_contig114053.2928.1|Name=mRNA_M-pyrifera_M_contig114053.2928.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig114053:8..559+ (Macrocystis pyrifera P11B4 male)back to top |