mRNA_M-pyrifera_M_contig114003.2908.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: A0A2P6MN57_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MN57_9EUKA) HSP 1 Score: 82.4 bits (202), Expect = 3.460e-16 Identity = 44/125 (35.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 1 RKEVVSIEGTAMVAEALLLMSSKGVSSLAIVDAS-GKLYSTFTLKDLRVVTNARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVT 372
RKEVV++ EA LM K +S LA+++ G L+S + +D++++ F KLFKTV E+I DVR + A FP ++ + V++++ + R+HR++V++E V V+SL D+ T
Sbjct: 180 RKEVVTVYTDTPALEAFRLMLEKKISGLAVINREEGTLFSNLSARDIKLIAGEALFTKLFKTVKEFIQDVRSTSNEAYFPIVYVSPDAKIRDVMVKLVSTRMHRLYVVDESVRPVGVVSLGDLTT 304
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: F4QF63_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QF63_CAVFA) HSP 1 Score: 82.4 bits (202), Expect = 3.940e-16 Identity = 45/128 (35.16%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 4 KEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTN-ARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFIK 384
K V+SI EA LM+ V+ +A+VD G + + + +DL+ + N R F L+ TV E+I VR++ A+ P+I C D+L++++ RM AA+IHR++V+++ + V VISL D++ + ++
Sbjct: 189 KPVISINFHKTAIEAFELMAEHRVNGIAVVDDKGVIIANISARDLKELLNETRIFENLYLTVGEFISRVRQQDYKAVHPSISCNMNDSLDKLMTRMCAAKIHRVYVVDQDRKPVGVISLHDILEKILE 316
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: D3BNG4_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BNG4_POLPP) HSP 1 Score: 82.0 bits (201), Expect = 5.110e-16 Identity = 44/127 (34.65%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 4 KEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTN-ARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFI 381
K VV+I EA LM+ K V+ +A+VD ++ + + +DL+ + N R F L+ +V E+I VR++ A+ P+I C ++L +++ RMAAA+IHR++++N +LV V+SL D++ + +
Sbjct: 184 KPVVTINSHKRALEAFQLMTEKRVTGIAVVDEKQQILANISARDLKELLNETRIFENLYLSVGEFISKVRQQDYKAVNPSICCTKDESLRKLMTRMAAAKIHRVYMVNNDRKLVGVVSLHDILEKLL 310
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: F0ZL99_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZL99_DICPU) HSP 1 Score: 82.0 bits (201), Expect = 5.110e-16 Identity = 41/128 (32.03%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 4 KEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTN-ARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFIK 384
K+V+SI+ +A LM+S V+ +A+ D G + + + +DL+ + N R F L+ +V E+I VR++ A+ P+I C+ D+L ++ RM AA+IHR+++++E+ + + VIS+ D++ + ++
Sbjct: 182 KKVISIDFNKRALDAFELMASHRVNGVAVNDEKGHIIANISARDLKELLNETRVFENLYLSVGEFISKVRQQDYKAVNPSISCHMNDSLASIITRMVAAKIHRVYIIDEERKPIGVISIHDILNKILE 309
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: UPI0006451169 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451169) HSP 1 Score: 79.7 bits (195), Expect = 3.610e-15 Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 1 RKEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTNA-RSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFI 381
+K V+SI EA LM+ K V+ +A+VD +L + + +DLR + N R F L+K+V E++ VR++ + P+I C +DT+ ++++ MAAA++HR+++++ VISL D++ +
Sbjct: 182 QKPVISINFHKRALEAFQLMAEKRVNGIAVVDDRNQLLANISARDLRELLNENRLFDDLYKSVGEFVTKVRQQDYRGVHPSICCSQEDTMRKLIMSMAAAKVHRVYMVDSDRRPTGVISLHDILLSLL 309
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: L8HEJ6_ACACA (CBS domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HEJ6_ACACA) HSP 1 Score: 79.3 bits (194), Expect = 4.230e-15 Identity = 44/127 (34.65%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 4 KEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVT-NARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFI 381
K+V++I A +A +M+ +G+S++ +VD GKL +++D+RVV +AR +L+ V E+I + + I PAI C KDT V+ ++AA+R+HR++V+ E H + +ISL D + +
Sbjct: 175 KDVITIGVNARAIDAFKIMTDRGISAVGVVDEEGKLVGNISVRDIRVVAGDARLIQRLYLGVREFIYKINSERIDIINPAIGCSAKDTYGLVVQKLAASRVHRIYVV-ENHVPIGLISLSDALLPLV 300
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: A0A8J4V5S4_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V5S4_9MYCE) HSP 1 Score: 79.3 bits (194), Expect = 5.090e-15 Identity = 41/128 (32.03%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 4 KEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTN-ARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFIK 384
KEV+SI+ +A LM+ V+ +A+ D G + + + +DL+ + N +R F L+ +V E+I VR++ A+ P+I C ++L+ ++ +MAAARIHR++++N + + V V+S+ D++ + ++
Sbjct: 185 KEVISIDFNKRALDAFQLMAHHRVNGIAVNDEKGHIIANISARDLKEILNKSRMFDDLYISVGEFISKVRQQDFKAVNPSICCTLDESLQHLITKMAAARIHRVYLVNNERKPVGVVSIHDILEKLLE 312
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: UPI000644CB87 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CB87) HSP 1 Score: 78.2 bits (191), Expect = 1.330e-14 Identity = 41/127 (32.28%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 4 KEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTN-ARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVTEFI 381
K V++I EA LM+ V+ +A+VD ++ + + +DL+ + N R F LF +V E+I VR++ A+ P+I C + L++++ RMAAA+IHR+F++++ + + V+SL+D++ + +
Sbjct: 183 KHVITINYHKRALEAFQLMAEHRVNGIAVVDEKNQILANISARDLKELLNETRIFENLFLSVGEFISKVRQQDYKAVHPSICCSKDEPLKKLITRMAAAKIHRVFMVDQDRKPIGVVSLQDILEKIL 309
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: D2VQZ4_NAEGR (Cystathionine-beta-synthase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VQZ4_NAEGR) HSP 1 Score: 69.7 bits (169), Expect = 1.090e-11 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 58 MSSKGVSSLAIVDASGKLYSTFTLKDLRVVTNARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMV 369
M VS LA+VDA+G L + +D++ + + + L + V ++ +R ++ N PAI C + L V+ R+AA RIHRM+V ++Q V VISLRD++
Sbjct: 157 MQQMKVSGLAVVDATGILIGNLSARDIKAINPSNLYHSLHQGVHTFVQHIREQSYNESHPAISCSEETELGFVIGRLAANRIHRMYVCDKQLHPVKVISLRDII 260
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Match: A0A6A5BFQ3_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BFQ3_NAEFO) HSP 1 Score: 66.6 bits (161), Expect = 2.010e-10 Identity = 37/121 (30.58%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 10 VVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTNARSFLKLFKTVDEYILDVRRRTANAIFPAIHCYTKDTLERVLLRMAAARIHRMFVLNEQHELVDVISLRDMVT 372
V+++E + M VS LA++D +G L + +D++ + + + L ++V ++ +R ++ N PAI C + L V+ R+AA RIHRM+V ++Q VISLRD+++
Sbjct: 180 VITLEKHMRTIDCFKKMHQMKVSGLAVIDNTGILIGNLSARDIKAINPSNLYHSLHQSVHTFVQHIREQSFNESHPAISCSEETELGFVIGRLAANRIHRMYVCDKQLHPCKVISLRDIIS 300 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114003.2908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114003.2908.1 >prot_M-pyrifera_M_contig114003.2908.1 ID=prot_M-pyrifera_M_contig114003.2908.1|Name=mRNA_M-pyrifera_M_contig114003.2908.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp RKEVVSIEGTAMVAEALLLMSSKGVSSLAIVDASGKLYSTFTLKDLRVVTback to top mRNA from alignment at M-pyrifera_M_contig114003:97..483- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114003.2908.1 ID=mRNA_M-pyrifera_M_contig114003.2908.1|Name=mRNA_M-pyrifera_M_contig114003.2908.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig114003:97..483- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114003:97..483- >mRNA_M-pyrifera_M_contig114003.2908.1 ID=mRNA_M-pyrifera_M_contig114003.2908.1|Name=mRNA_M-pyrifera_M_contig114003.2908.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig114003:97..483- (Macrocystis pyrifera P11B4 male)back to top |