mRNA_M-pyrifera_M_contig113987.2900.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI000476E741 (IS21 family transposase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI000476E741) HSP 1 Score: 246 bits (629), Expect = 1.500e-78 Identity = 119/188 (63.30%), Postives = 136/188 (72.34%), Query Frame = 1
Query: 1 KDDPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
+ DPVVRFET PG+QMQ DWGVF+ +S F+ TLGWSR ++ FV NE+FETL+ CHE AF F G+P EVLYDNMRTVV +R+AYGR HRFHP L D A H F PRLCRPYRAKTKGKVER IGY+R SFFVPL TR Q GLVLD++ N+E WL AN R H TT VP+ R EER
Sbjct: 108 RPDPVVRFETEPGQQMQVDWGVFRRGRHPLSAFVATLGWSRYSYVEFVTNERFETLKHCHESAFAYFQGIPREVLYDNMRTVVQQRHAYGRDQHRFHPALWDFARHTGFTPRLCRPYRAKTKGKVERFIGYLRHSFFVPLCTRLSQGGLVLDVETANLEVRTWLRDVANARTHATTEAVPAQRWAEER 295
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: A0A2D7F7I7_9HYPH (IS21 family transposase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7F7I7_9HYPH) HSP 1 Score: 243 bits (621), Expect = 3.190e-77 Identity = 117/188 (62.23%), Postives = 134/188 (71.28%), Query Frame = 1
Query: 1 KDDPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
K DPVVRFET PG+QMQADW + +F+GTLGWSR A+ F ++EQFE LR CHE AFD F GVP EVLYDNM+TVV ERNAY R LHRFHPG D A H FLPRLCRPYRAKTKGKVER IGY++RSF++P V RQ G+ D N A WL AN RVH TT EVP++R++ ER
Sbjct: 109 KPDPVVRFETEPGQQMQADWATVGRGSDELKVFIGTLGWSRTAYVEFCDDEQFEMLRLCHEHAFDFFAGVPREVLYDNMKTVVLERNAYRRNLHRFHPGFLDYAGHAGFLPRLCRPYRAKTKGKVERFIGYLKRSFWIPFVASCRQAGIKPDCRATNAAVAIWLREVANARVHATTSEVPAERMIIER 296
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI00191ED3F9 (IS21 family transposase n=2 Tax=Microvirga TaxID=186650 RepID=UPI00191ED3F9) HSP 1 Score: 239 bits (611), Expect = 7.460e-76 Identity = 116/186 (62.37%), Postives = 135/186 (72.58%), Query Frame = 1
Query: 7 DPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
+PVVRFET PG QMQ DW + R+S+F+ TLGWSR + FV +E+ ETL CHEQAF AFGGVP EVLYDNM+TVV ER+AYGRG HRFHPG D A H F PRLCRPYRA+TKGKVER I Y+R SF+VPL ++Y Q GLV+D + NV RWL AN RVH TT VP++RL ER
Sbjct: 110 EPVVRFETAPGEQMQVDWATIRRGTNRLSVFVATLGWSRDTYAEFVSDERLETLIACHEQAFLAFGGVPHEVLYDNMKTVVVERDAYGRGRHRFHPGFADFAGHCGFRPRLCRPYRAQTKGKVERFIRYLRDSFWVPLASQYAQEGLVVDRETANVAMHRWLREVANARVHATTAAVPAERLESER 295
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI001ADF9BBC (IS21 family transposase n=1 Tax=Roseomonas sp. SSH11 TaxID=2820812 RepID=UPI001ADF9BBC) HSP 1 Score: 236 bits (602), Expect = 2.170e-74 Identity = 115/185 (62.16%), Postives = 132/185 (71.35%), Query Frame = 1
Query: 10 PVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
PVVRFETPPG QMQ DW V + R+S+F+ TLGWSR A+ FVE+E+ ETL CHE AF AFGGVP EVLYDNMRTVV ER+ YGRG HRFHPG D A H F PRLC+PYRA++KGKVER I Y+R F+VPL +R G+V+D N+ RWL AN RVH TTGEVP RL ER
Sbjct: 111 PVVRFETPPGGQMQVDWAVIRRGADRLSVFVATLGWSRAAYAEFVEDERLETLLSCHEHAFLAFGGVPEEVLYDNMRTVVLERDRYGRGRHRFHPGFLDFAGHCGFRPRLCQPYRAQSKGKVERFIRYLRGGFWVPLASRMAAEGIVVDRAAANLAVGRWLREVANARVHATTGEVPLVRLEAER 295
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI0010579778 (IS21 family transposase n=1 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI0010579778) HSP 1 Score: 235 bits (600), Expect = 4.340e-74 Identity = 115/186 (61.83%), Postives = 133/186 (71.51%), Query Frame = 1
Query: 7 DPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
+PVVRFET PG QMQ DW V + R+S+F+ TLGWSR A+ FV +E+ ETL CHE AF AFGGVP EVLYDNMRTVV ERN YGRG HRF PG D A H F PRLC+PYRA++KGKVER I Y+R SF++PL +R GLV+D N+ RWL AN RVH TTGEVP+DRL ER
Sbjct: 110 EPVVRFETAPGEQMQVDWAVIRRGADRLSVFVATLGWSRAAYVEFVGDERLETLLACHEHAFLAFGGVPWEVLYDNMRTVVLERNRYGRGRHRFQPGFLDFAGHCGFRPRLCQPYRAQSKGKVERFIRYLRGSFWLPLASRMAAEGLVVDQAAANLAVGRWLREVANARVHATTGEVPADRLEAER 295
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI0018DEF3E1 (IS21 family transposase n=1 Tax=Roseomonas sp. OP-27 TaxID=2748667 RepID=UPI0018DEF3E1) HSP 1 Score: 232 bits (591), Expect = 7.420e-74 Identity = 113/186 (60.75%), Postives = 133/186 (71.51%), Query Frame = 1
Query: 7 DPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
+PVVRFET PG QMQ DW V + R+S+F+ TLGWSR A+ FV +E+ ETL CHE AF AFGGVP EVLYDNMRTVV ER+ YGRG HRF PG D A H F PRLCRPYRA++KGKVER I Y+R SF+VPL +R G+++D N+ RWL AN RVH TTGEVP+ RL +ER
Sbjct: 25 EPVVRFETAPGEQMQVDWAVIRRGSDRLSVFVATLGWSRAAYVEFVADERLETLLACHEHAFLAFGGVPREVLYDNMRTVVLERDRYGRGQHRFQPGFLDFAGHCGFRPRLCRPYRAQSKGKVERFIRYLRGSFWVPLASRMAAEGVMVDGAAANLAVGRWLRKVANARVHATTGEVPAARLEQER 210
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI0002D464A8 (IS21 family transposase n=1 Tax=Candidatus Glomeribacter gigasporarum TaxID=132144 RepID=UPI0002D464A8) HSP 1 Score: 233 bits (594), Expect = 5.100e-73 Identity = 111/185 (60.00%), Postives = 134/185 (72.43%), Query Frame = 1
Query: 10 PVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
P++RFETP G+QMQ DW VF+ +S F+ TL WSR +F FV NE+ +TL CHE AF+ FGGVP E+LYDNM+TVV ER+AYG G HRF P D A+HY F+PRLC+PYRAKTKGKVER GY+RRSF+VPL + R GL LD+ N E RWLA AN R+HGTT P++RL EER
Sbjct: 111 PLIRFETPAGQQMQCDWIVFRRGKHPLSAFVATLSWSRTSFVEFVNNEKLDTLLACHEHAFEYFGGVPREILYDNMKTVVLERDAYGPGKHRFQPAFLDFANHYGFVPRLCQPYRAKTKGKVERFNGYLRRSFYVPLAAQLRVAGLKLDVITANAEVRRWLAEVANPRIHGTTQVKPAERLNEER 295
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: UPI0008357707 (IS21 family transposase n=1 Tax=Sphingomonas sp. CCH20-B6 TaxID=1768769 RepID=UPI0008357707) HSP 1 Score: 231 bits (589), Expect = 1.670e-72 Identity = 113/185 (61.08%), Postives = 132/185 (71.35%), Query Frame = 1
Query: 10 PVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
P VRFET PG Q Q DW + R+S+F+ TLGWSR A+ FV +E+ ETL CHE AF AFGGVP EVLYDN +TVV ER+AYGRG HRFHP L D A F PRLC+PYR +TKGKVER I Y+R SF+VPL +R+ Q GLV+D D NV RWL AN RVH TTGE+P++RL EER
Sbjct: 111 PAVRFETEPGEQAQVDWATIRRGPDRLSVFVATLGWSRAAYVEFVTDERVETLIACHEHAFLAFGGVPREVLYDNAKTVVVERDAYGRGRHRFHPALLDFAGGCGFRPRLCQPYRPQTKGKVERFIRYLRGSFWVPLASRFAQDGLVVDRDAANVAAKRWLREVANARVHATTGEIPAERLEEER 295
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: A0A4P7C0Z2_9GAMM (IS21 family transposase n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4P7C0Z2_9GAMM) HSP 1 Score: 231 bits (588), Expect = 2.360e-72 Identity = 112/186 (60.22%), Postives = 134/186 (72.04%), Query Frame = 1
Query: 7 DPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
+PVVRFET PG QMQ DW VF+ R+S F+ TLG+SR ++ FV +E+ ETL CHEQAF+AFGGVPL VLYDNM+TVV +R+ Y G HRF GL D AHHY F+P+LCRPYRAKTKGKVER Y+R SF+ PL +R +Q LVLD N+E RWL AN RVH TTG P + L+EER
Sbjct: 109 EPVVRFETAPGEQMQVDWIVFRRGRDRLSAFVATLGYSRASYVEFVTDERLETLLSCHEQAFEAFGGVPLRVLYDNMKTVVLQRDYYAEGQHRFQAGLWDFAHHYGFVPKLCRPYRAKTKGKVERFNHYLRHSFYNPLASRLKQARLVLDKATANLEVHRWLGEVANRRVHATTGRRPVEVLIEER 294
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Match: A0A4R4DMF9_9PROT (IS21 family transposase n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A4R4DMF9_9PROT) HSP 1 Score: 230 bits (586), Expect = 5.640e-72 Identity = 112/186 (60.22%), Postives = 131/186 (70.43%), Query Frame = 1
Query: 7 DPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENEQFETLRECHEQAFDAFGGVPLEVLYDNMRTVVHERNAYGRGLHRFHPGLNDLAHHYTFLPRLCRPYRAKTKGKVERNIGYVRRSFFVPLVTRYRQLGLVLDLDGLNVEFARWLALTANTRVHGTTGEVPSDRLVEER 564
+PVVRFET PG QMQ DW V + R+S+F+ TLGWSR A+ F +E+ ETL CHE AF AFGGVP EVLYDNMRTVV ER+ YGRG HRF PG D A H F PRLC+PYRA++KGKVER I Y+R F+VPL +R G+V+D N+ RWL AN RVH TTGEVP+DRL ER
Sbjct: 110 EPVVRFETAPGEQMQVDWAVIRRGADRLSVFVATLGWSRAAYVEFATDERLETLLTCHEHAFLAFGGVPREVLYDNMRTVVLERDRYGRGQHRFQPGFLDFAGHCGFRPRLCQPYRAQSKGKVERFIRYLRGGFWVPLASRMAVDGVVVDQAAANLAVGRWLREVANARVHATTGEVPTDRLEAER 295 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113987.2900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113987.2900.1 >prot_M-pyrifera_M_contig113987.2900.1 ID=prot_M-pyrifera_M_contig113987.2900.1|Name=mRNA_M-pyrifera_M_contig113987.2900.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp KDDPVVRFETPPGRQMQADWGVFKLNGQRISLFLGTLGWSRCAFGVFVENback to top mRNA from alignment at M-pyrifera_M_contig113987:11..574- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113987.2900.1 ID=mRNA_M-pyrifera_M_contig113987.2900.1|Name=mRNA_M-pyrifera_M_contig113987.2900.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig113987:11..574- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113987:11..574- >mRNA_M-pyrifera_M_contig113987.2900.1 ID=mRNA_M-pyrifera_M_contig113987.2900.1|Name=mRNA_M-pyrifera_M_contig113987.2900.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig113987:11..574- (Macrocystis pyrifera P11B4 male)back to top |