mRNA_M-pyrifera_M_contig113868.2877.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: A0A5A8CHR2_CAFRO (AP-1 complex subunit gamma n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CHR2_CAFRO) HSP 1 Score: 188 bits (478), Expect = 4.930e-52 Identity = 105/195 (53.85%), Postives = 129/195 (66.15%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKA--EDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPT--TESAIPPGPRGELREEADVAEALMQLLDHHAA 573
AV RHR T+V CLRD D S+RRRALDLV+ALTD+ N+ MA EMVNY V+A +ER +CA++A+ ARRFA + RWE DTL V +A+ G+A + V+ RL YLV+ A +D A+LAHK ML EN SPD Q PLL IAAW GE L PPPLP +S IP GPRG R ++ + L LL HH A
Sbjct: 350 AVARHRTTIVACLRDADSSIRRRALDLVYALTDSTNILSMAGEMVNYAVIAEKDERAAVCARVASAARRFAPSMRWEADTLLVLIAVRGEAARRDVVRRLIYLVTAAPGDDTQASLAHKCAEMLSENSSSPDCQAPLLLIAAWCIGEFAAELTSDPPPLPEGPDDSVIPVGPRGRARTPKELVDVLGSLLTHHKA 544
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: A0A812ZAN1_9DINO (AP-1 complex subunit gamma n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZAN1_9DINO) HSP 1 Score: 187 bits (474), Expect = 9.030e-52 Identity = 105/202 (51.98%), Postives = 129/202 (63.86%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKA---------EDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPT--TESAIPPGPRGELREEADVAEALMQLLDHHAA 573
AV RHR T+V CLRD D S+RRRALDLV+ALTD+ N+ MA EMVNY V+A +ER +CA++A+ ARRFA + RWE DTL V +A+ G+A + V+ RL YLVS+ +D A+LAHK ML EN SPD Q PLL IAAW GE L PPPLP +S IP GPRG R ++ + L LL HH A
Sbjct: 424 AVARHRTTIVACLRDADSSIRRRALDLVYALTDSTNILSMAGEMVNYAVIAEKDERAAVCARVASAARRFAPSMRWEADTLLVLIAVRGEAARRDVVRRLIYLVSRCPPQVTAAPGDDTQASLAHKCAEMLSENASSPDCQAPLLLIAAWCIGEFAAELTSDPPPLPEGPADSVIPVGPRGRARTPKELVDVLGSLLTHHKA 625
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: K8YRB5_NANGC (AP-1 complex subunit gamma-1 (Fragment) n=3 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRB5_NANGC) HSP 1 Score: 139 bits (351), Expect = 4.330e-35 Identity = 79/191 (41.36%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPTTESAIPPGPRGELREEADVAEALMQLLDHHAA 573
+VQRHR T+V+CL+DPDVS+R+RAL+L+ L + +NV+ + EM+NYLVVA E + LC+KI V +A + W +DTL +A+AGDA P++ L Y +S AED HK F +L ++ Q L+ A W GE G+LLL+A P L SA+ P + A V +AL +++ +H A
Sbjct: 346 SVQRHRNTIVECLKDPDVSIRQRALELICQLVNPQNVQELTREMLNYLVVALPEHKASLCSKIMHVVETYAPSLLWRLDTLITMLAIAGDACDPSIPHALVYYLSTAEDLQRYAVHKLFLLLTDDAS----QLGLVLAAVWAIGEFGDLLLQAQPALDEDTSAMEP------QTPAAVLDALEEVVTNHGA 526
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.440e-35 Identity = 79/191 (41.36%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPTTESAIPPGPRGELREEADVAEALMQLLDHHAA 573
+VQRHR T+V+CL+DPDVS+R+RAL+L+ L + +NV+ + EM+NYLVVA E + LC+KI V +A + W +DTL +A+AGDA P++ L Y +S AED HK F +L ++ Q L+ A W GE G+LLL+A P L SA+ P + A V +AL +++ +H A
Sbjct: 340 SVQRHRNTIVECLKDPDVSIRQRALELICQLVNPQNVQELTREMLNYLVVALPEHKASLCSKIMHVVETYAPSPLWRLDTLITMLAIAGDACDPSIPHALVYYLSTAEDLQRYAVHKLFLLLTDDAS----QLGLVLAAVWAIGEFGDLLLQAQPALDEDTSAMEP------QTPAAVLDALEEVVTNHGA 520
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: A0A7S1U5B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5B6_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.830e-31 Identity = 80/193 (41.45%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPL--PTTESAIPPGPRGELREEADVAEALMQLLDHHAA 573
AVQRHR T+V+CL+DPDVSLR+RALDL++ + ENV+ +A EM+NYLVVA AE+R + + I RFA TA W V+TL +++AG+ V AV++ +++ E ++ HK F M+ DS Q L++ A W GE G+ LL P PT + PP E V E L ++L H A
Sbjct: 340 AVQRHRNTIVECLKDPDVSLRQRALDLIYVMVQEENVQELATEMLNYLVVANAEQRASIGSHILDTVERFAPTAEWRVNTLITLLSIAGNDVDDAVVSSSVMYIAQEEALYSQTVHKLFGMM--RNDSS--QLGLVHCAVWCIGEYGDKLLAGCPASLSPTEDKQYPPVAASE------VVEGLYEVLIMHNA 522
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: A0A7R9WDZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDZ0_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.240e-31 Identity = 73/182 (40.11%), Postives = 106/182 (58.24%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAG-DAVKPAVLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPTTESAIPPGPRGELREEADVAEA 543
A+QRHR TVVDCL+DPD+S+R+RAL+L++ L + +NVE + AE++NYLV+ E R +CA++ V RF+ + RW VDTL + +AG + + + + Y+ +ED A HK +L RD Q LL + W GE G+LLL+ P T + PP G L E A+ A
Sbjct: 67 ALQRHRTTVVDCLKDPDISIRQRALELIYHLVNRDNVETLTAELLNYLVLCPREHRAEICARVLRVVDRFSPSDRWRVDTLVTMLTIAGRECARQVQSSAIVYISRSSEDLRAYATHK---LLKAVRDDDGSQRGLLVVGIWCVGEYGDLLLK-----PYTYT--PPSSAGNLTEMAEAEAA 238
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: A0A7S2WL96_9STRA (AP-1 complex subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL96_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.090e-30 Identity = 65/157 (41.40%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 4 VQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLP 474
VQRHR T+VDCL+DPDVS+R+RAL+L+ LT+++NV + E +NYLVVA+ E++ LC+KI ++A + RW+VDTL +++AG+A ++ A ++ AE+ H + H F ++ E+ Q L+++A W GE G LLL+ P+P
Sbjct: 357 VQRHRATIVDCLKDPDVSIRQRALELIHQLTNSKNVIDLTRETLNYLVVASTEQKVTLCSKIMDTVDKYAPSRRWQVDTLITMLSIAGNACDESIAANTVMYITVAEELHGYIVHHLFHLMDEDLS----QLALVHVAVWCFGEYGHLLLQPVAPMP 509
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: A0A2D4BI73_PYTIN (AP-1 complex subunit gamma n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI73_PYTIN) HSP 1 Score: 127 bits (318), Expect = 2.000e-30 Identity = 76/193 (39.38%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLAR-LAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPTTESAIPPGPRGELR-EEADVAEALMQLLDHHAA 573
AVQRH T+VDCL+DPD S+R+RA +LV+AL D+ NV+ +A EM+N+LVVA E++ LC+KIA VA R++ + RW +DTL +++AG + ++ L L+ + HA HK F L ++ Q L+++ W GE G LL++ PP E A G + EA + E L +++ +HAA
Sbjct: 340 AVQRHTNTIVDCLKDPDTSIRQRAFELVYALVDSSNVQQLAREMLNHLVVAPNEQKPLLCSKIADVADRYSRSDRWHMDTLITMLSIAGATLPDERISHSLIALIQRVPAEHAYAVHKLFWALHDDI----TQLALVHVGLWCIGEYGSLLVQDPPVQHAGEEA---GSTDRXQVTEASIVELLRKIVRYHAA 525
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI) HSP 1 Score: 125 bits (314), Expect = 6.960e-30 Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPAVLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPTTESAIPPGPRGELREEADVAEALMQLLDHHAA 573
+VQRHR T+VDCL+DPD+S+R+RAL+L+ L + V + EM+NYLVVA E + LC KI A A R+A RW ++TL +++AG + + + + ++ H HK A L E D + L+ +A W GE +LL P E P + ++ + L LL+HH+A
Sbjct: 341 SVQRHRSTIVDCLKDPDISIRQRALELIHQLVNESTVVSLTREMLNYLVVAMPEHKAQLCDKITAAAERYAPDRRWRIETLITMLSIAGSHCNERITSGTIMYIGQCKEFHGQAVHKLAAALQE--DMVAAPSGLMKVAVWCIGEFADLLASPQDAFPAVEGGSAMCPAQDAMPHEEIIDLLEDLLNHHSA 529
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Match: K3WEF7_GLOUD (AP-1 complex subunit gamma n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEF7_GLOUD) HSP 1 Score: 124 bits (312), Expect = 1.280e-29 Identity = 71/192 (36.98%), Postives = 116/192 (60.42%), Query Frame = 1
Query: 1 AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVATAEEREPLCAKIAAVARRFASTARWEVDTLAVAVALAGDAVKPA-VLARLAYLVSKAEDHHAALAHKFFAMLLENRDSPDVQTPLLNIAAWVTGELGELLLEAPPPLPTTESAIPPGPRGELREEADVAEALMQLLDHHAA 573
AVQRH T+VDCL+DPD S+R+RAL+L++AL + N++ +A EM+NYLVVA A+++ LC++IA R+A + RW +DTL +++AG ++ + + L L+ + + HA + HK F L ++ Q L+++ W GE G LLL P++E + R + E+ + E ++L HHA+
Sbjct: 340 AVQRHTNTIVDCLKDPDTSIRQRALELIYALVNESNIQSLAREMLNYLVVAPADQKPTLCSRIADAVDRYAPSNRWHIDTLITMLSIAGASLPDERISSSLILLIQRNPELHAYVVHKLFWALHDDIS----QLALVHVGMWCIGEYGRLLLLD---APSSEDTLSEKARVD---ESTIVELFKKILRHHAS 521 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113868.2877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113868.2877.1 >prot_M-pyrifera_M_contig113868.2877.1 ID=prot_M-pyrifera_M_contig113868.2877.1|Name=mRNA_M-pyrifera_M_contig113868.2877.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp AVQRHRGTVVDCLRDPDVSLRRRALDLVFALTDAENVEHMAAEMVNYLVVback to top mRNA from alignment at M-pyrifera_M_contig113868:3..575- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113868.2877.1 ID=mRNA_M-pyrifera_M_contig113868.2877.1|Name=mRNA_M-pyrifera_M_contig113868.2877.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig113868:3..575- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113868:3..575- >mRNA_M-pyrifera_M_contig113868.2877.1 ID=mRNA_M-pyrifera_M_contig113868.2877.1|Name=mRNA_M-pyrifera_M_contig113868.2877.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig113868:3..575- (Macrocystis pyrifera P11B4 male)back to top |