mRNA_M-pyrifera_M_contig113833.2866.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113833.2866.1
Unique NamemRNA_M-pyrifera_M_contig113833.2866.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: K8Z9F0_NANGC (Kynurenine-oxoglutarate transaminase / cysteine-S-conjugate beta-lyase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z9F0_NANGC)

HSP 1 Score: 130 bits (328), Expect = 1.610e-33
Identity = 63/117 (53.85%), Postives = 79/117 (67.52%), Query Frame = 1
Query:    7 SYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARL 357
            SYYAWL   + RKR  LV+ L  A +  IVP+GG+F +ADTS +QVP  YL E+   S   ++RDWA  R+LT E GV+ IPPSAFY   +KHLA +++RFAFCK DA I E  AR 
Sbjct:  342 SYYAWLRDEYMRKRTLLVDALRTAGLEPIVPEGGFFIIADTSNIQVPPRYLGESTPASPNPMSRDWAFCRYLTLEAGVAAIPPSAFYKEEHKHLAKNHARFAFCKADASIVEAKARF 458          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A813A706_9DINO (Ccbl protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A706_9DINO)

HSP 1 Score: 128 bits (322), Expect = 4.300e-33
Identity = 62/122 (50.82%), Postives = 83/122 (68.03%), Query Frame = 1
Query:    1 HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLKKL 366
            H SY+A+L + +  KR  L + L  A +  I P+GG+F MADTS + +P +YLAE+   +   +TRDWA  RWLT+EVGV+ IPPSAFY  ++KHL A+ +RFAFCKTD  + E   RL KL
Sbjct:  276 HDSYFAYLRAQYLAKRTLLCDALNAAGLKAIAPEGGFFVMADTSAVSIPDSYLAES-TPACPSMTRDWAFCRWLTKEVGVAAIPPSAFYQDSDKHLVANLARFAFCKTDEALTEAAGRLAKL 396          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A0M0J5Z3_9EUKA (Kynurenine-oxoglutarate transaminase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J5Z3_9EUKA)

HSP 1 Score: 123 bits (309), Expect = 4.310e-31
Identity = 63/122 (51.64%), Postives = 76/122 (62.30%), Query Frame = 1
Query:    1 HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLKKL 366
            HA+YY WL   F+ KR  L + LE A +  +V  GG+F M DTSRL VP  YL E    + + VTRDWA+ RWL  E GV  IP S F+   NKHLAA+Y RFAFCK+D  I E   RL+ L
Sbjct:  293 HANYYEWLKELFRSKRKLLADGLERAGIRPMVGHGGFFLMGDTSRLLVPQKYLDERTPAAPDGVTRDWALCRWLAYEAGVIAIPTSPFFSPPNKHLAANYVRFAFCKSDDTIREACDRLEAL 414          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A7S3DMI9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DMI9_9STRA)

HSP 1 Score: 117 bits (293), Expect = 4.940e-31
Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 1
Query:    7 SYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLA-ETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLKK 363
            SYYA+LA+ ++RKR  L + L +A M  + P G +F MAD+SRL++P+A+L  ET       + RDWA +RW+T  VGV+ IPPSAFY R N  LA +Y R AFCKTD  + E   RL+K
Sbjct:   46 SYYAYLANEYRRKRGILEQALLQAGMTPVRPPGSFFIMADSSRLEIPSAFLQQETEAMPASPMPRDWACSRWMTEHVGVTAIPPSAFYSRPNIPLAQNYLRLAFCKTDETLYEAKERLEK 165          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A835Z5Y9_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Y9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.400e-31
Identity = 65/126 (51.59%), Postives = 81/126 (64.29%), Query Frame = 1
Query:    1 HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQ----VTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLKKL 366
            HASYYA+L   +QRKRDRLV  L +A +  IVP+GG F +ADTS +      +AE ++         +TRDWA+ RWLT E GV  IPPS FY   +KHLAA+ +RFAFCK D+ IE   A L KL
Sbjct:  285 HASYYAYLVDRYQRKRDRLVVALRDANIVPIVPEGGIFVVADTSGVLGFDGTIAEQYMQQTTPACPIMTRDWALCRWLTIEKGVCAIPPSTFYKPEHKHLAANLARFAFCKEDSTIEGAAAALHKL 410          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A482RDV6_9ARCH (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDV6_9ARCH)

HSP 1 Score: 114 bits (285), Expect = 3.190e-29
Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 1
Query:    1 HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLKKL 366
            + SYYAWL + + RKRD L + L  A +  +VP+GG+F +ADT  + VP  +L      S   + RDWA  R+LT +VGV+ IPPSAF+   +K LA   +RFAFCK DA + E   RL KL
Sbjct:   91 YPSYYAWLRAEYTRKRDILAKGLRSAGLKPVVPEGGFFIIADTRDVDVPRTFLDTPTPASGPIMRRDWATCRYLTMDVGVACIPPSAFFQEKDKELAKYMARFAFCKEDASLHEACTRLAKL 212          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A7S3PUU4_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUU4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 9.860e-29
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
Query:    7 SYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAE-TFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLK 360
            SYY W+A  ++RKR  L + L+   M  IVPDGG+F M DTS + +P  YL E T     + + RDWA++RW+T+EVGV+ IPPSAFY + + HLA +  RFA+CK D  I E   R K
Sbjct:  342 SYYFWVAEEYKRKRGLLCDALKTGGMQPIVPDGGFFIMTDTSNIDLPEKYLEEKTVAMPADPMPRDWALSRWMTKEVGVTAIPPSAFYDKESIHLAKNLLRFAYCKGDDTILEAKKRFK 460          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A7S2EH69_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EH69_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.230e-28
Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1
Query:    1 HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAE-TFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLK 360
            HASYY +LA+ ++RKRD LV  L+   +  IVPDGG+F M +TS+++ P  Y+ E T       + RDWA++RW+T+EVGV+ IPPSAF+ + + HLA +  RFA CK D  + E   R K
Sbjct:  172 HASYYEYLAAEYKRKRDLLVNSLKITGITPIVPDGGFFIMGETSKVEFPKEYMEEVTDAMPTNPMPRDWAMSRWMTKEVGVTAIPPSAFHEKESVHLAKNLLRFAACKGDETLLEAQRRFK 292          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A6U2LVN9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2LVN9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.840e-28
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 1
Query:    1 HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARL 357
            + SYY +L+ +++ KRD L+  L  A +  IVP+GG+F + DTS+L  P +YL E    S   +TRDWA++R+LT+EVGV+ IPPSAFY  +  HLA +  RFA+CK +  I+E   RL
Sbjct:  347 YGSYYEYLSESYKEKRDLLISALLSANITPIVPNGGFFIIGDTSQLVCPESYLNEVTEASHVPMTRDWALSRFLTKEVGVTAIPPSAFYSPSTCHLAGNTLRFAYCKDNGTIKEAHERL 465          
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Match: A0A7S1G4F7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4F7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.470e-28
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 1
Query:   67 LEEAEMPCIVPDGGYFAMADTSRLQVPAAYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADYSRFAFCKTDADIEECGARLK 360
            L +A  P +VPDGG+FAMAD S+++VP  YL  T   +   +T DWA ARWLT E GV+PIPPS FY R N H     SRFAFCKTD  I+   A++K
Sbjct:    4 LVDAGTPPVVPDGGFFAMADISKVKVPDEYLT-TPTAACPDMTNDWAFARWLTIEGGVTPIPPSCFYSRENMHFGEQLSRFAFCKTDESIDAAVAQMK 100          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113833.2866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K8Z9F0_NANGC1.610e-3353.85Kynurenine-oxoglutarate transaminase / cysteine-S-... [more]
A0A813A706_9DINO4.300e-3350.82Ccbl protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A0M0J5Z3_9EUKA4.310e-3151.64Kynurenine-oxoglutarate transaminase n=1 Tax=Chrys... [more]
A0A7S3DMI9_9STRA4.940e-3150.00Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A835Z5Y9_9STRA5.400e-3151.59Pyridoxal phosphate-dependent transferase n=1 Tax=... [more]
A0A482RDV6_9ARCH3.190e-2946.72Aminotransferase class I/II-fold pyridoxal phospha... [more]
A0A7S3PUU4_9STRA9.860e-2948.74Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2EH69_9STRA1.230e-2847.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U2LVN9_9STRA2.840e-2847.06Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1G4F7_9STRA5.470e-2854.08Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113833contigM-pyrifera_M_contig113833:3..371 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue7.2e-22
Seed eggNOG ortholog2850.Phatr10257
Preferred nameCCBL2
KEGG rclassRC00006,RC01210,RC01245
KEGG koko:K00816,ko:K09142,ko:K14264
KEGG ReactionR01956,R04171,R09366,R09373
KEGG Pathwayko00380,ko00450,ko01100,ko05204,map00380,map00450,map01100,map05204
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006090,GO:0006103,GO:0006520,GO:0006558,GO:0006559,GO:0006568,GO:0006569,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0016053,GO:0016054,GO:0016212,GO:0016740,GO:0016769,GO:0016829,GO:0016846,GO:0017144,GO:0019439,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0034641,GO:0036137,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0042737,GO:0042802,GO:0042803,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046218,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046983,GO:0047312,GO:0047315,GO:0047316,GO:0047804,GO:0047945,GO:0050896,GO:0051186,GO:0051704,GO:0051707,GO:0070013,GO:0070189,GO:0070546,GO:0070548,GO:0071704,GO:0097052,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902221,GO:1902222
EggNOG free text desc.Aminotransferase class I and II
EggNOG OGs2XB2S@2836,COG0436@1,KOG0257@2759
EC2.6.1.64,2.6.1.7,4.4.1.13
COG Functional cat.E
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01007
Exons1
Model size369
Cds size369
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815652.4948733-CDS-M-pyrifera_M_contig113833:2..3711622815652.4948733-CDS-M-pyrifera_M_contig113833:2..371Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113833 3..371 +
1692277505.9798498-CDS-M-pyrifera_M_contig113833:2..3711692277505.9798498-CDS-M-pyrifera_M_contig113833:2..371Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113833 3..371 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113833.2866.1prot_M-pyrifera_M_contig113833.2866.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113833 3..371 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113833.2866.1

>prot_M-pyrifera_M_contig113833.2866.1 ID=prot_M-pyrifera_M_contig113833.2866.1|Name=mRNA_M-pyrifera_M_contig113833.2866.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
HASYYAWLASTFQRKRDRLVELLEEAEMPCIVPDGGYFAMADTSRLQVPA
AYLAETFLGSDEQVTRDWAVARWLTREVGVSPIPPSAFYCRANKHLAADY
SRFAFCKTDADIEECGARLKKL*
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mRNA from alignment at M-pyrifera_M_contig113833:3..371+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113833.2866.1 ID=mRNA_M-pyrifera_M_contig113833.2866.1|Name=mRNA_M-pyrifera_M_contig113833.2866.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig113833:3..371+ (Macrocystis pyrifera P11B4 male)
CACGCCTCCTACTACGCCTGGCTGGCCTCCACTTTCCAGCGGAAGAGAGA CCGCCTCGTGGAGCTCTTGGAGGAAGCAGAGATGCCTTGCATTGTGCCTG ATGGTGGCTACTTCGCCATGGCCGACACCAGCCGCCTCCAGGTGCCTGCC GCCTACCTTGCAGAGACATTCCTTGGCAGCGACGAGCAAGTGACGCGCGA CTGGGCAGTGGCGCGCTGGCTCACCCGCGAGGTGGGCGTGTCTCCCATCC CGCCGTCAGCCTTCTACTGCAGAGCCAACAAGCACCTGGCGGCCGACTAC TCTCGCTTTGCCTTCTGCAAGACCGACGCAGACATCGAGGAGTGCGGCGC TCGGCTGAAGAAACTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113833:3..371+

>mRNA_M-pyrifera_M_contig113833.2866.1 ID=mRNA_M-pyrifera_M_contig113833.2866.1|Name=mRNA_M-pyrifera_M_contig113833.2866.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig113833:3..371+ (Macrocystis pyrifera P11B4 male)
CACGCCTCCTACTACGCCTGGCTGGCCTCCACTTTCCAGCGGAAGAGAGA
CCGCCTCGTGGAGCTCTTGGAGGAAGCAGAGATGCCTTGCATTGTGCCTG
ATGGTGGCTACTTCGCCATGGCCGACACCAGCCGCCTCCAGGTGCCTGCC
GCCTACCTTGCAGAGACATTCCTTGGCAGCGACGAGCAAGTGACGCGCGA
CTGGGCAGTGGCGCGCTGGCTCACCCGCGAGGTGGGCGTGTCTCCCATCC
CGCCGTCAGCCTTCTACTGCAGAGCCAACAAGCACCTGGCGGCCGACTAC
TCTCGCTTTGCCTTCTGCAAGACCGACGCAGACATCGAGGAGTGCGGCGC
TCGGCTGAAGAAACTCTGACACGCCTCCTACTACGCCTGGCTGGCCTCCA
CTTTCCAGCGGAAGAGAGACCGCCTCGTGGAGCTCTTGGAGGAAGCAGAG
ATGCCTTGCATTGTGCCTGATGGTGGCTACTTCGCCATGGCCGACACCAG
CCGCCTCCAGGTGCCTGCCGCCTACCTTGCAGAGACATTCCTTGGCAGCG
ACGAGCAAGTGACGCGCGACTGGGCAGTGGCGCGCTGGCTCACCCGCGAG
GTGGGCGTGTCTCCCATCCCGCCGTCAGCCTTCTACTGCAGAGCCAACAA
GCACCTGGCGGCCGACTACTCTCGCTTTGCCTTCTGCAAGACCGACGCAG
ACATCGAGGAGTGCGGCGCTCGGCTGAAGAAACTCTGA
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