mRNA_M-pyrifera_M_contig113713.2854.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: UPI001F5B230D (DUF4198 domain-containing protein n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI001F5B230D) HSP 1 Score: 238 bits (607), Expect = 1.280e-76 Identity = 109/181 (60.22%), Postives = 137/181 (75.69%), Query Frame = 1
Query: 4 NLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+LL+SL + + T+ Y+++ PGDH+FYV PA YWEP E MIQH+TKVVVDG+GGG+ WD +GLPVEI+PL+RPYGLW N+FRG V + G+PVPFA VEVE+RND V PFAAYSTQV+KAD QGVFSY +PRAGWWGFAAL G + + NP GE +E +IW++AR+M
Sbjct: 66 SLLSSLEAVEVDGQQTFQFDYQIKAPGDHLFYVEPAPYWEPAEGVMIQHYTKVVVDGYGGGDEWDADLGLPVEIQPLTRPYGLWAGNLFRGIVKQEGEPVPFATVEVEWRND-GSVTPPFAAYSTQVVKADAQGVFSYAMPRAGWWGFAALIEGEEPMMNPHGEAVPLELGALIWVYAREM 245
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: A0A7Y5SIJ5_9BACT (DUF4198 domain-containing protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SIJ5_9BACT) HSP 1 Score: 234 bits (598), Expect = 6.380e-75 Identity = 108/181 (59.67%), Postives = 128/181 (70.72%), Query Frame = 1
Query: 4 NLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+L SL P + KTT+ A+ +L PGDH+ Y+ PA YWEP E+K I H+TKVVVD G EGWD+L+G PVEIEPL RPYGLWT N FRG V + G P PFA VEVEY N+ + P A+ TQVIKAD GVFSY +PRAGWWGFAAL GA K+P+PKG L DVE G+IW+ DM
Sbjct: 77 DLRGSLQPQKVEGKTTYRATVQLNRPGDHVLYIEPAPYWEPAEEKWIVHYTKVVVDFMGAEEGWDQLLGFPVEIEPLVRPYGLWTGNTFRGIVRRNGAPAPFATVEVEYHNEGRRIATPNDAFITQVIKADAGGVFSYSMPRAGWWGFAALVDGAQKIPDPKGNLADVELGGLIWVKTVDM 257
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: A0A7C9KMC7_9PROT (DUF4198 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KMC7_9PROT) HSP 1 Score: 233 bits (595), Expect = 1.280e-74 Identity = 108/181 (59.67%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 4 NLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+L+ +L P K W A+YK PG++ F+V PA YWEP E+KMI H+TKV+VD FG G+GWD+ VGLPVEI PL+RPYGLWT N+FRG V+K GKPVP A +EVE+RND N + P AY TQVI+AD +GVF YGLPRAGWWGFAAL G + NP+G+ VE G+IW+ ARDM
Sbjct: 79 DLMGALRPRTIAGKAAWQATYKFVRPGNYTFFVEPAPYWEPAEKKMIIHYTKVIVDAFGAGDGWDRPVGLPVEILPLARPYGLWTGNVFRGVVVKDGKPVPNAEIEVEWRNDGN-IKAPADAYETQVIRADSRGVFVYGLPRAGWWGFAALIDGDTPIRNPEGQDAGVEFGGLIWVRARDM 258
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: D3RNW4_ALLVD (Nickel transport complex, NikM subunit, transmembrane n=4 Tax=Allochromatium TaxID=85072 RepID=D3RNW4_ALLVD) HSP 1 Score: 233 bits (593), Expect = 2.420e-74 Identity = 108/181 (59.67%), Postives = 132/181 (72.93%), Query Frame = 1
Query: 4 NLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+LLA+LT Q ++ + A Y++ +PGDH+F+V PA YWEP E MI H+TKVVVDGFGGGEGWD VG PVEI PL+RPYGLWT N+F G V + G+PVPFA VEVE+ ND V P A+ TQV+KAD QGVF+Y +PRAGWWGFAAL G + NP+GE VE +IW+ ARDM
Sbjct: 77 DLLATLTTRTQDDQPAYSARYRIGQPGDHVFFVEPAPYWEPAEGVMIVHYTKVVVDGFGGGEGWDAEVGFPVEITPLTRPYGLWTGNLFSGVVKRNGRPVPFAEVEVEWHND-GSVTAPADAFVTQVVKADAQGVFAYAMPRAGWWGFAALLEGERPMKNPEGEEVPVETGALIWVHARDM 256
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: A0A7V7F3F1_9DELT (DUF4198 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V7F3F1_9DELT) HSP 1 Score: 231 bits (589), Expect = 1.040e-73 Identity = 106/182 (58.24%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 1 RNLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
++L +L Q K+T+ A+Y + P D++FYV PA YWEP EQKMI H+TKVVVD FG EGWD +VGLPVEIEPL+RPYGLWT N+FRG V K G VP+A VEVEY N ++V +P Y+TQVIKAD GVF+Y +P+AGWW FAAL G DK+ +P+G+ DVE G+IW+ RDM
Sbjct: 75 QDLRPTLKKQNQEGKSTYSAAYSISSPADYVFYVEPAPYWEPAEQKMIIHYTKVVVDAFGAEEGWDAMVGLPVEIEPLTRPYGLWTGNLFRGIVKKNGAAVPYAEVEVEYYNVDHQVAIPADPYATQVIKADSNGVFAYSMPKAGWWSFAALVDGDDKLTSPEGKPVDVELGGLIWVRTRDM 256
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: L0GVA5_9GAMM (ABC-type Co2+ transport system, periplasmic component n=1 Tax=Thioflavicoccus mobilis 8321 TaxID=765912 RepID=L0GVA5_9GAMM) HSP 1 Score: 229 bits (585), Expect = 5.100e-73 Identity = 107/177 (60.45%), Postives = 129/177 (72.88%), Query Frame = 1
Query: 16 SLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+L + + K T+ A Y++++PGD++FY+ PA YWEP E MI H+TKVVVDGFG EGWD VGLPVEIEPL RPYGLWT N+FRG V KAG+PVPFA +EVE+RND V P Y TQVIKAD GVFSY +P AGWWGFAAL G + + NP GE VE+ +IW+ ARDM
Sbjct: 89 ALERVEEDGKATYRARYRVKQPGDYVFYLQPAAYWEPAEGVMIVHYTKVVVDGFGAEEGWDAEVGLPVEIEPLVRPYGLWTGNLFRGIVKKAGQPVPFAEIEVEWRND-GSVTAPADPYVTQVIKADANGVFSYAMPHAGWWGFAALLEGDEPMKNPAGEDVSVEQGALIWVQARDM 264
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: A0A1H3DCM2_ALLWA (Cobalt/nickel transport protein n=2 Tax=Allochromatium warmingii TaxID=61595 RepID=A0A1H3DCM2_ALLWA) HSP 1 Score: 229 bits (583), Expect = 8.480e-73 Identity = 106/182 (58.24%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 RNLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
++L ASL P ++ + + ASY LQ+PGDH+F++ PA YWEP E MI H+TKVVVDGF GG GWD VG PVEI+PL+RPYGLWT N+FRG VL+ G+PVPFA VEVE+RND + P A+ TQVIK D QGVF+Y +PRAGWWGFAAL G + NP G VE V+W+ R+M
Sbjct: 78 QDLRASLIPRLESGQAAYRASYPLQQPGDHVFFIEPAPYWEPAEGVMIVHYTKVVVDGFSGGGGWDASVGFPVEIQPLTRPYGLWTGNLFRGLVLRNGQPVPFAEVEVEWRND-GSLTAPADAFVTQVIKTDAQGVFAYAMPRAGWWGFAALLDGEQPMTNPAGVAVPVELGAVMWVRTREM 258
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: A0A369BXV9_9GAMM (Cobalt/nickel transport protein n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369BXV9_9GAMM) HSP 1 Score: 229 bits (583), Expect = 9.930e-73 Identity = 109/182 (59.89%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 1 RNLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
R+L ASL P+ +TT+ Y+ + P DH+FY+ PA YWEP E KMI H+TKVVVD F EGWD LVG PVEIEPL RPYGLWT N FRG V + G+PVPFA VEVEY N V VP ++TQVIKADG GVFSY +PRAGWWGFAAL GA + P GE VE G+IW+ DM
Sbjct: 82 RDLKASLQPVTVEGRTTYQTRYRFKAPADHVFYIEPAPYWEPAEGKMIVHYTKVVVDAFEAEEGWDALVGFPVEIEPLVRPYGLWTGNSFRGIVRRDGEPVPFAEVEVEYLNSDGAVAVPAGPFATQVIKADGNGVFSYTMPRAGWWGFAALVEGATPMTAPTGESVPVELGGLIWVRTVDM 263
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: UPI0019086657 (DUF4198 domain-containing protein n=2 Tax=Thiococcus pfennigii TaxID=1057 RepID=UPI0019086657) HSP 1 Score: 229 bits (583), Expect = 1.020e-72 Identity = 107/181 (59.12%), Postives = 130/181 (71.82%), Query Frame = 1
Query: 4 NLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+L +LT + Q K+T+ A Y+ +EPGD++FY+ PA YWEP E MI H+TKVVVDGFG EGWD VGLPVEIEPL RPYGLWT N+F+G V KAG+PVPFA +EVE+RND + P Y TQVIKAD GVFSY +P AGWWGFAAL G + NP G+ VE+ +IW+ RDM
Sbjct: 85 DLSGALTRVEQDGKSTYQARYRAKEPGDYVFYLEPAAYWEPAEGVMIVHYTKVVVDGFGAEEGWDAEVGLPVEIEPLVRPYGLWTGNLFQGLVKKAGQPVPFAEIEVEWRND-GSLTAPAGPYVTQVIKADANGVFSYAMPHAGWWGFAALLGGDAPMKNPAGDEVPVEQGALIWVQTRDM 264
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Match: A0A6I6E3I5_THETI (DUF4198 domain-containing protein n=1 Tax=Thermochromatium tepidum ATCC 43061 TaxID=316276 RepID=A0A6I6E3I5_THETI) HSP 1 Score: 228 bits (580), Expect = 2.270e-72 Identity = 106/181 (58.56%), Postives = 131/181 (72.38%), Query Frame = 1
Query: 4 NLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHHTKVVVDGFGGGEGWDKLVGLPVEIEPLSRPYGLWTHNIFRGRVLKAGKPVPFAIVEVEYRNDRNEVHVPFAAYSTQVIKADGQGVFSYGLPRAGWWGFAALTTGADKVPNPKGELTDVEEAGVIWIFARDM 546
+LLA+LT Q + + A Y++Q+PGDH+F+V PA YWEP E MI H+TKVVVDGFGGG GWD VGLPVEI PL+RPYGLWT N+FRG V + G+PVPFA VEVE+RND + P A+ TQV+K D QGVF+Y +PRAGWWGFAAL + NP+G+ VE +IW+ RDM
Sbjct: 77 DLLANLTARTQDGQPAYSARYRIQQPGDHVFFVEPAPYWEPAEGVMIVHYTKVVVDGFGGGGGWDAEVGLPVEITPLTRPYGLWTGNLFRGIVKRNGQPVPFAEVEVEWRND-GSLTPPADAFVTQVLKTDAQGVFAYAMPRAGWWGFAALPESERTLQNPEGQEVPVETGALIWVHTRDM 256 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113713.2854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113713.2854.1 >prot_M-pyrifera_M_contig113713.2854.1 ID=prot_M-pyrifera_M_contig113713.2854.1|Name=mRNA_M-pyrifera_M_contig113713.2854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp RNLLASLTPLRQTEKTTWLASYKLQEPGDHIFYVSPALYWEPGEQKMIQHback to top mRNA from alignment at M-pyrifera_M_contig113713:3..548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113713.2854.1 ID=mRNA_M-pyrifera_M_contig113713.2854.1|Name=mRNA_M-pyrifera_M_contig113713.2854.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig113713:3..548+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113713:3..548+ >mRNA_M-pyrifera_M_contig113713.2854.1 ID=mRNA_M-pyrifera_M_contig113713.2854.1|Name=mRNA_M-pyrifera_M_contig113713.2854.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig113713:3..548+ (Macrocystis pyrifera P11B4 male)back to top |