mRNA_M-pyrifera_M_contig113666.2844.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113666.2844.1
Unique NamemRNA_M-pyrifera_M_contig113666.2844.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A8H7QCG2_9FUNG (PIPK domain-containing protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7QCG2_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.840e-17
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ASAGKSGSFF+ SRD   I+KT+   E  F+  +L E   +++ +PD+LLCR+YGLH ++      IHFVVM N+LPP
Sbjct:  291 LSELASAGKSGSFFYYSRDYRFIIKTIHHTEHKFMRKILKEYHDHVSSNPDTLLCRYYGLHRVKLPHGRKIHFVVMGNVLPP 372
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BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A0B7NCH3_9FUNG (PIPK domain-containing protein n=5 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7NCH3_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.840e-17
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ASAGKSGSFF+ SRD   I+KT+   E  F+  +L E   +++ +PD+LLCR+YGLH ++      IHFVVM N+LPP
Sbjct:  297 LSELASAGKSGSFFYYSRDYRFIIKTIHHTEHKFMRKILKEYHDHVSSNPDTLLCRYYGLHRVKLPHGRKIHFVVMGNVLPP 378
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BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A8H7S2D7_9FUNG (PIPK domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S2D7_9FUNG)

HSP 1 Score: 85.1 bits (209), Expect = 2.530e-17
Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ S GKSGSFF+ SRD   I+KT+  AE  +L  +L E  +++  +PD+LLCR+YGLH ++Q +   IHFVVM N+ PP
Sbjct:  348 LSELGSPGKSGSFFYYSRDYRFIIKTIHHAEHKYLRKILKEYHSHVTTNPDTLLCRYYGLHRVKQPRGRKIHFVVMGNVFPP 429
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BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A162V019_PHYB8 (PIPK domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162V019_PHYB8)

HSP 1 Score: 84.0 bits (206), Expect = 5.080e-17
Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ S GKSGSFF+ SRD   I+KT+   E  F+ D+L +   ++ ++PD+LLCR+YGLH ++      IHFVVM N+ PP
Sbjct:  118 LSELGSPGKSGSFFYYSRDYRFIIKTIHHTEHKFMRDILKQYYEHVVDNPDTLLCRYYGLHRVKLPHGRKIHFVVMANVFPP 199
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BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A077WK15_9FUNG (PIPK domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WK15_9FUNG)

HSP 1 Score: 84.0 bits (206), Expect = 6.400e-17
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ S GKSGSFF+ SRD   I+KT+  +E  +L  +L +  A++  +PD+LLCR+YGLH ++Q +   IHFVVM N+ PP
Sbjct:  297 LSELGSPGKSGSFFYYSRDYRFIIKTIHHSEHKYLRKILKDYHAHVMSNPDTLLCRYYGLHRVKQPRGRKIHFVVMGNVFPP 378
[Close]
BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A1D1XEN8_9ARAE (1-phosphatidylinositol-4-phosphate 5-kinase n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XEN8_9ARAE)

HSP 1 Score: 84.0 bits (206), Expect = 6.430e-17
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPPVR 273
            L ++ S GKSGSFF+ SRD   I+KT+   E  FL  +L E   ++  +PD+LL RFYGLH ++  + P IHFV+M N+ PP R
Sbjct:  354 LSELGSPGKSGSFFYFSRDYRFIIKTIHHTEHKFLRKILKEYYEHIRNNPDTLLSRFYGLHRVKLPRGPKIHFVIMNNIFPPHR 437
[Close]
BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A068RJK0_9FUNG (1-phosphatidylinositol-4-phosphate 5-kinase n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RJK0_9FUNG)

HSP 1 Score: 84.0 bits (206), Expect = 6.510e-17
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ S GKSGSFF+ SRD   I+KT+  +E  +L  +L +  A++  +PD+LLCR+YGLH ++Q +   IHFVVM N+ PP
Sbjct:  500 LSELGSPGKSGSFFYYSRDYRFIIKTIHHSEHKYLRKILKDYHAHVMNNPDTLLCRYYGLHRVKQPRGRKIHFVVMGNVFPP 581
[Close]
BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A1E3IEP8_9TREE (1-phosphatidylinositol-4-phosphate 5-kinase n=3 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3IEP8_9TREE)

HSP 1 Score: 83.6 bits (205), Expect = 8.890e-17
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 1 
Query:    1 SVAAQDSLLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPPVR 273
            S+ A+  L ++ S GKSGSFF+ SRD   I+KT+  +E  FL  +L +   ++ E+P +LL RFYGLH ++  + P IHFV+M NL PP R
Sbjct:  460 SLTAKYILSELGSPGKSGSFFYFSRDYRFIIKTISHSEHKFLRSILKDYHIHVKENPQTLLSRFYGLHRVKLPRGPKIHFVIMNNLFPPHR 550
[Close]
BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: I1BTY9_RHIO9 (PIPK domain-containing protein n=2 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BTY9_RHIO9)

HSP 1 Score: 83.2 bits (204), Expect = 1.180e-16
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ S GKSGSFF+ SRD   I+KT+   E  F+ D+L +   ++ E+P++LLCR+YGLH I+      IHFVVM N+ PP
Sbjct:  233 LSELGSPGKSGSFFYYSRDYRFIIKTIHYTEHKFMRDILKDYYNHVTENPNTLLCRYYGLHRIKLPHGKKIHFVVMSNVFPP 314
[Close]
BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Match: A0A8H7S2K3_9FUNG (PIPK domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S2K3_9FUNG)

HSP 1 Score: 83.2 bits (204), Expect = 1.190e-16
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:   22 LLDMASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSLLCRFYGLHTIRQMQQPPIHFVVMENLLPP 267
            L ++ S GKSGSFF+ SRD   I+KT+  +E  +L  +L E   +++ +PD+LLCR+YGLH ++  +   IHFVVM N+LPP
Sbjct:  282 LSELGSPGKSGSFFYYSRDYRFIIKTIHHSEHKYLRKILSEYHEHVSNNPDTLLCRYYGLHRVKLPRGRKIHFVVMGNVLPP 363
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113666.2844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H7QCG2_9FUNG1.840e-1750.00PIPK domain-containing protein n=1 Tax=Mucor plumb... [more]
A0A0B7NCH3_9FUNG1.840e-1750.00PIPK domain-containing protein n=5 Tax=Mucoraceae ... [more]
A0A8H7S2D7_9FUNG2.530e-1748.78PIPK domain-containing protein n=1 Tax=Mucor circi... [more]
A0A162V019_PHYB85.080e-1746.34PIPK domain-containing protein (Fragment) n=1 Tax=... [more]
A0A077WK15_9FUNG6.400e-1747.56PIPK domain-containing protein n=1 Tax=Lichtheimia... [more]
A0A1D1XEN8_9ARAE6.430e-1747.621-phosphatidylinositol-4-phosphate 5-kinase n=1 Ta... [more]
A0A068RJK0_9FUNG6.510e-1747.561-phosphatidylinositol-4-phosphate 5-kinase n=1 Ta... [more]
A0A1E3IEP8_9TREE8.890e-1746.151-phosphatidylinositol-4-phosphate 5-kinase n=3 Ta... [more]
I1BTY9_RHIO91.180e-1647.56PIPK domain-containing protein n=2 Tax=Rhizopus de... [more]
A0A8H7S2K3_9FUNG1.190e-1647.56PIPK domain-containing protein n=1 Tax=Mucor circi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113666contigM-pyrifera_M_contig113666:223..495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score85.1
Seed ortholog evalue1.6e-14
Seed eggNOG ortholog36080.S2K3F5
Preferred nameMSS4
KEGG rclassRC00002,RC00078
KEGG koko:K00889
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05231,map00562,map01100,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05231
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000935,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0007049,GO:0008150,GO:0008152,GO:0008289,GO:0009653,GO:0009987,GO:0010927,GO:0016020,GO:0016043,GO:0016301,GO:0016307,GO:0016308,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030258,GO:0030428,GO:0030435,GO:0030437,GO:0031321,GO:0032153,GO:0032155,GO:0032266,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035091,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044464,GO:0044703,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0052811,GO:0052812,GO:0052813,GO:0070273,GO:0071704,GO:0071840,GO:0071944,GO:1901981,GO:1903046
EggNOG free text desc.Translation initiation factor IF-2, N-terminal region
EggNOG OGs1GVIN@112252,38BAH@33154,3NW6Q@4751,COG5253@1,KOG0229@2759
EC2.7.1.68
COG Functional cat.T
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons1
Model size273
Cds size243
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815651.2301571-UTR-M-pyrifera_M_contig113666:222..2521622815651.2301571-UTR-M-pyrifera_M_contig113666:222..252Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig113666 223..252 +
1692277505.420903-UTR-M-pyrifera_M_contig113666:222..2521692277505.420903-UTR-M-pyrifera_M_contig113666:222..252Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig113666 223..252 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815651.2438087-CDS-M-pyrifera_M_contig113666:252..4951622815651.2438087-CDS-M-pyrifera_M_contig113666:252..495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113666 253..495 +
1692277505.4316978-CDS-M-pyrifera_M_contig113666:252..4951692277505.4316978-CDS-M-pyrifera_M_contig113666:252..495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113666 253..495 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113666.2844.1prot_M-pyrifera_M_contig113666.2844.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113666 253..495 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113666.2844.1

>prot_M-pyrifera_M_contig113666.2844.1 ID=prot_M-pyrifera_M_contig113666.2844.1|Name=mRNA_M-pyrifera_M_contig113666.2844.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
MASAGKSGSFFFQSRDGMCIVKTVDEAELSFLIDLLDEMVAYLAESPDSL
LCRFYGLHTIRQMQQPPIHFVVMENLLPPVR
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mRNA from alignment at M-pyrifera_M_contig113666:223..495+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113666.2844.1 ID=mRNA_M-pyrifera_M_contig113666.2844.1|Name=mRNA_M-pyrifera_M_contig113666.2844.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=273bp|location=Sequence derived from alignment at M-pyrifera_M_contig113666:223..495+ (Macrocystis pyrifera P11B4 male)
TCGGTTGCGGCGCAGGATAGTCTGCTGGACATGGCCTCTGCGGGGAAGAG
CGGCAGTTTCTTCTTCCAGTCCCGCGACGGCATGTGCATCGTGAAGACTG
TAGACGAAGCAGAACTCAGCTTCTTGATCGACCTTCTGGATGAGATGGTT
GCCTACCTGGCGGAGAGCCCCGACTCTTTGTTGTGTCGCTTCTACGGGCT
TCATACCATTCGCCAGATGCAGCAGCCGCCCATCCACTTCGTGGTCATGG
AGAATCTCCTGCCACCGGTACGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113666:223..495+

>mRNA_M-pyrifera_M_contig113666.2844.1 ID=mRNA_M-pyrifera_M_contig113666.2844.1|Name=mRNA_M-pyrifera_M_contig113666.2844.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig113666:223..495+ (Macrocystis pyrifera P11B4 male)
ATGGCCTCTGCGGGGAAGAGCGGCAGTTTCTTCTTCCAGTCCCGCGACGG
CATGTGCATCGTGAAGACTGTAGACGAAGCAGAACTCAGCTTCTTGATCG
ACCTTCTGGATGAGATGGTTGCCTACCTGGCGGAGAGCCCCGACTCTTTG
TTGTGTCGCTTCTACGGGCTTCATACCATTCGCCAGATGCAGCAGCCGCC
CATCCACTTCGTGGTCATGGAGAATCTCCTGCCACCGGTACGAATGGCCT
CTGCGGGGAAGAGCGGCAGTTTCTTCTTCCAGTCCCGCGACGGCATGTGC
ATCGTGAAGACTGTAGACGAAGCAGAACTCAGCTTCTTGATCGACCTTCT
GGATGAGATGGTTGCCTACCTGGCGGAGAGCCCCGACTCTTTGTTGTGTC
GCTTCTACGGGCTTCATACCATTCGCCAGATGCAGCAGCCGCCCATCCAC
TTCGTGGTCATGGAGAATCTCCTGCCACCGGTACGA
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