mRNA_M-pyrifera_M_contig113581.2838.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A7S3YZQ8_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YZQ8_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 4.080e-21 Identity = 61/190 (32.11%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 1 FNIDSSYDRGFWSRNLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAS--CVAGAGKPVTTSPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASA-------QCAAFQTLSALVSTLYPASSSLPRPLLFGPD 543
+N+DSS+DRGF+ SN AR PS LRFGG+GNDY+ Y + + C++G P C+N+T L + A+++ + +FG++ D +G G W+ +NA+ +++Y++ + ++G ELGNE N+ GA Q AAF L+ ++ +P + RP++ GPD
Sbjct: 62 WNVDSSWDRGFFHIEFSNKNLVAAARALRPSTLRFGGSGNDYLLYNMPSNPDVCMSGHDSPRFG---CMNATHWDKLYNLAEATETDFLFGVSF---------DKISAGVQGKGYRWNSSNAQDMMQYIVDSNQTIWGFELGNEVNNLGAKGSNITGADQAAAFVELAEVIEKFFPNQDT--RPMIVGPD 237
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A7S3BFR8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BFR8_9VIRI) HSP 1 Score: 79.3 bits (194), Expect = 5.860e-14 Identity = 62/193 (32.12%), Postives = 96/193 (49.74%), Query Frame = 1
Query: 1 FNIDSSYDRGFWSRNLSNPIYGRVARHFSPSILRFGGTGNDYVCYK--VGNASCVAGAGKPVTTSPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFG----------ASAQCAAFQTLSALVSTLYPASSSLPRPLLFGPD 543
FN+DS+++RGF+ + +N A +P+ LR GGTG DY+ Y G+ C A A + CLN+T +L+ AD+ +L+FGL+ E+AC G + A G A +LLR+ + ++G+ELGNE N+ A A TL ++ +Y +S RP++ GPD
Sbjct: 68 FNVDSTFNRGFFHVDFANTALRAAASSLAPATLRVGGTGGDYLHYGGFAGSEPCPA-ASSSANDTYGCLNTTHWADLVGLADTVG-DLLFGLSYDAERACGGGAGAGAAYEWRADAAQG--ALRLLRHAAASGQRIWGVELGNELNNLNRADRQACGLRAEHHAEALITLQKVLEGVYQNASD--RPVVIGPD 254
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A6A2XN37_HIBSY (Heparanase-like protein 3 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XN37_HIBSY) HSP 1 Score: 71.6 bits (174), Expect = 2.670e-11 Identity = 52/148 (35.14%), Postives = 73/148 (49.32%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCY-----KVGNASCVAGAGKPVTTSPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENG-VLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQ 468
+L NPI + FSP +R GGT D V Y K+ A V + + S CL L F + A +VFGLN G G +G V+GAW+ +NAE L+RY +++ ++++G ELGNE G A+ AA Q
Sbjct: 80 DLGNPILLNAIKAFSPLKIRMGGTLQDTVIYGTKDDKIPCAPFVKNSSELFGFSKGCLPMFRWDQLNVFFKKAGAMVVFGLNAL--------SGRTVGSDGSVIGAWNSSNAESLIRYTVNKGYSIHGWELGNELCGSGIGAKIAAEQ 219
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A6J0KTA3_RAPSA (heparanase-like protein 3 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0KTA3_RAPSA) HSP 1 Score: 68.6 bits (166), Expect = 3.080e-10 Identity = 56/182 (30.77%), Postives = 86/182 (47.25%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAS--CVAGAGKPVTTSPQ--------CLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQ------TLSALVSTLYPASSSLPRPLLFGP 540
+L+N I+ R F+P +R GGT D V Y+ + C+ P T + CL+ L +F + + A ++FGLN ++ + +GE +GAWD TNAE +RY++ + + G ELGNE G + AA Q L +V+ +Y S P PL+ GP
Sbjct: 79 DLNNTIFQNAIREFAPLKIRIGGTLQDLVVYETAHHQQPCL-----PFTQNTSLLFGYTQGCLSRHRWNQLNAFFNKTGAKVIFGLNALSGRSI-----QPNGE--AVGAWDYTNAESFIRYIVQNNHTVDGWELGNELCGSGVGTRIAASQYATDTIALRNIVNRVYKDVS--PMPLVIGP 246
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A6P6TR46_COFAR (heparanase-like protein 3 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6TR46_COFAR) HSP 1 Score: 68.6 bits (166), Expect = 3.120e-10 Identity = 56/178 (31.46%), Postives = 84/178 (47.19%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNASCVAGAGKPVTT------SPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQT------LSALVSTLYPASSSLPRPLLFGP 540
+LSN + + FSP +R GGT D V Y+ NA + V + + CL + L F + A ++FGLN + + G N V+G W+ +NAE L++Y +S ++ +YG ELGNE + G A AA Q L +V +Y S +PL+ GP
Sbjct: 97 DLSNKVLLNAVKAFSPLKIRLGGTLQDKVVYQ--NADGPRSCNEFVRSIEMFGFTEGCLPMSRWDELNKFFTLAGAEVIFGLNALHGRT--IGPG-----NNVIGPWNSSNAESLIKYTVSNNYTIYGWELGNELSGNGIGASVAADQYASDVIHLQNIVQDVYKGFQS--KPLVLGP 263
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A0D3DL35_BRAOL (Uncharacterized protein n=12 Tax=Brassiceae TaxID=981071 RepID=A0A0D3DL35_BRAOL) HSP 1 Score: 67.8 bits (164), Expect = 5.700e-10 Identity = 56/182 (30.77%), Postives = 83/182 (45.60%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAS--CVAGAGKPVTTSPQ--------CLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQ------TLSALVSTLYPASSSLPRPLLFGP 540
+L+N I+ R F+P +R GGT D V Y+ + C+ P T + CL L F + A ++FGLN ++ + +GE +GAWD TNAE +RY++ + + G ELGNE G + AA Q L +V+ +Y S P PL+ GP
Sbjct: 78 DLNNTIFQNAIREFAPLKIRIGGTLQDLVIYETPDQKQPCL-----PFTQNTSLLFGYTQGCLPMRRWNQLNDFFSKTGAKVIFGLNALSGRSI-----QSNGE--AVGAWDYTNAESFIRYIVQNNHTVDGWELGNELCGSGVGTRVAASQYATDTIALRNIVNRVYKDGS--PMPLVIGP 245
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A6D2I3S8_9BRAS (Uncharacterized protein n=4 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I3S8_9BRAS) HSP 1 Score: 66.6 bits (161), Expect = 1.420e-9 Identity = 58/182 (31.87%), Postives = 88/182 (48.35%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAS--CVAGAGKPVTTSPQ--------CLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQ------TLSALVSTLYPASSSLPRPLLFGP 540
+L+N I+ R F+P +R GGT D V Y+ + CV P T + CL L +F + A ++FGLN A + ++ +++GE +GAWD TNAE +R+++ + + G ELGNE G A+ AA Q L +V+ +Y S P PL+ GP
Sbjct: 78 DLNNIIFQNAIRAFAPLKIRIGGTLQDLVRYETPDQKQPCV-----PFTKNSSILFGYTQGCLPMRRWNELNAFFQKTGAKIIFGLN-----ALSGRNIKRNGE--AVGAWDYTNAESFIRFIVESNHTVDGWELGNELCGSGVGARVAANQYAIDTIALRNIVNRVYKNVS--PMPLVIGP 245
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: UPI0007EF365A (heparanase-like protein 3 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF365A) HSP 1 Score: 66.6 bits (161), Expect = 1.430e-9 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAS--CVAGAGKP---VTTSPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQTLSALVS 489
+L+N I+ + + F+P +R GG+ D + Y+ + C A K + + CL L F + + A+++FGLN ++ NV G +G WD TNAE +RY + +++ ++G ELGNE G + AA Q S +S
Sbjct: 82 DLTNEIFLKAIKAFTPLKIRLGGSLQDKLIYETEDQRQPCTPFAYKASELFSFTKGCLPMHRWDELNLFFEKTGASIIFGLNALNGRSTNVSTGI------AVGKWDSTNAESFIRYTVKKNYMIHGWELGNELCGSGVGLRVAAAQYSSDTIS 229
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A162A8Q7_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162A8Q7_DAUCS) HSP 1 Score: 66.6 bits (161), Expect = 1.650e-9 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 1
Query: 43 NLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAS--CVAGAGKP---VTTSPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKACNVQDGEKSGENGVLGAWDGTNAEQLLRYLISQDFALYGLELGNEQNSFGASAQCAAFQTLSALVS 489
+L+N I+ + + F+P +R GG+ D + Y+ + C A K + + CL L F + + A+++FGLN ++ NV G +G WD TNAE +RY + +++ ++G ELGNE G + AA Q S +S
Sbjct: 96 DLTNEIFLKAIKAFTPLKIRLGGSLQDKLIYETEDQRQPCTPFAYKASELFSFTKGCLPMHRWDELNLFFEKTGASIIFGLNALNGRSTNVSTGI------AVGKWDSTNAESFIRYTVKKNYMIHGWELGNELCGSGVGLRVAAAQYSSDTIS 243
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Match: A0A7S3BEE1_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BEE1_9VIRI) HSP 1 Score: 63.2 bits (152), Expect = 4.160e-9 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 1 FNIDSSYDRGFWSRNLSNPIYGRVARHFSPSILRFGGTGNDYVCYK--VGNASCVAGAGKPVTTSPQCLNSTWLGNLLSFADSSSANLVFGLNLFPEKAC 294
FN+DS+++RGF+ + +N A +P+ LR GGTG DY+ Y G+ C A A + CLN+T +L+ AD+ +L+FGL+ E+AC
Sbjct: 68 FNVDSTFNRGFFHVDFANTALRAAASSLAPATLRVGGTGGDYLHYGGFAGSEPCPA-ASSSANDTYGCLNTTHWADLVGLADTVG-DLLFGLSYDAERAC 165 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113581.2838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113581.2838.1 >prot_M-pyrifera_M_contig113581.2838.1 ID=prot_M-pyrifera_M_contig113581.2838.1|Name=mRNA_M-pyrifera_M_contig113581.2838.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp FNIDSSYDRGFWSRNLSNPIYGRVARHFSPSILRFGGTGNDYVCYKVGNAback to top mRNA from alignment at M-pyrifera_M_contig113581:3..554+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113581.2838.1 ID=mRNA_M-pyrifera_M_contig113581.2838.1|Name=mRNA_M-pyrifera_M_contig113581.2838.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig113581:3..554+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113581:3..554+ >mRNA_M-pyrifera_M_contig113581.2838.1 ID=mRNA_M-pyrifera_M_contig113581.2838.1|Name=mRNA_M-pyrifera_M_contig113581.2838.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig113581:3..554+ (Macrocystis pyrifera P11B4 male)back to top |