mRNA_M-pyrifera_M_contig113559.2829.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113559.2829.1
Unique NamemRNA_M-pyrifera_M_contig113559.2829.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A836BTK8_9CHLO (GPI mannosyltransferase 2 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BTK8_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 4.270e-11
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSLREF 141
            +YGF+Q QYW+VGFL++WT+ QLPNFLLA P L+LS+  L E+
Sbjct:  347 VYGFVQAQYWNVGFLRYWTLQQLPNFLLAGPVLMLSILGLAEY 389
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A0U5HE00_ASPCI (GPI mannosyltransferase 2 n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5HE00_ASPCI)

HSP 1 Score: 64.7 bits (156), Expect = 5.370e-11
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 1 
Query:    1 LLHPIYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLL----SLWSLREFTSPRS 156
            LL  IYG++Q  YW VGFLK+WTV  +P FLLATP LL+    SLW+L    SPRS
Sbjct:  127 LLPSIYGWVQRHYWGVGFLKYWTVPNIPLFLLATPMLLILFLSSLWALGAGVSPRS 182
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A067MV60_9AGAM (GPI mannosyltransferase 2 n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MV60_9AGAM)

HSP 1 Score: 64.3 bits (155), Expect = 1.070e-10
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWS 129
            IY F+QE+YW+VGFL++WT+SQLPNFLLA P LLL L++
Sbjct:  269 IYSFVQERYWNVGFLRYWTISQLPNFLLAAPVLLLLLYT 307
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A1E4TH35_9ASCO (GPI mannosyltransferase 2 n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TH35_9ASCO)

HSP 1 Score: 62.8 bits (151), Expect = 3.710e-10
Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSLREF 141
            IYGF+Q++YW+VGFL++WT++Q+PNFL ATPT++L   S R +
Sbjct:  269 IYGFVQDKYWNVGFLRYWTLAQIPNFLFATPTIILFHMSARYY 311
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A2J5I5I6_9EURO (GPI mannosyltransferase 2 n=3 Tax=Aspergillus TaxID=5052 RepID=A0A2J5I5I6_9EURO)

HSP 1 Score: 62.4 bits (150), Expect = 5.180e-10
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:    1 LLHPIYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWS 129
            L+  IYG++QEQYW+VGFL++WT+S LP FLLA P L+L  WS
Sbjct:  310 LIPSIYGWVQEQYWNVGFLRYWTLSNLPLFLLALPMLVLLCWS 352
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A7S0YNK3_9CHLO (GPI mannosyltransferase 2 n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0YNK3_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 5.180e-10
Identity = 26/40 (65.00%), Postives = 37/40 (92.50%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSL 132
            IYGF+Q++YW+VGFLK++++SQLPNF+LA PTLL++ W L
Sbjct:  299 IYGFVQKEYWNVGFLKYFSLSQLPNFILAAPTLLITGWFL 338
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A061H460_9BASI (GPI mannosyltransferase 2 n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A061H460_9BASI)

HSP 1 Score: 62.4 bits (150), Expect = 5.190e-10
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSL 132
            +Y F+Q+QYWDVGFL++WT SQLPNF+LA+P L L +++L
Sbjct:  416 VYAFVQDQYWDVGFLRYWTWSQLPNFILASPVLALCIYTL 455
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A017S6C3_9EURO (GPI mannosyltransferase 2 n=1 Tax=Aspergillus ruber CBS 135680 TaxID=1388766 RepID=A0A017S6C3_9EURO)

HSP 1 Score: 62.0 bits (149), Expect = 7.080e-10
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:    4 LHPIYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLL----SLWSLR 135
            L  IYG++Q+QYW+VGFL++WTVS +P FLLA P L+L    SLW+LR
Sbjct:  306 LPSIYGWVQDQYWNVGFLRYWTVSNIPLFLLAAPMLILLCYASLWALR 353
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A2J7ZFP7_9CHLO (GPI mannosyltransferase 2 (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZFP7_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 9.160e-10
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSLREF 141
            +YGF+Q QYW VG  ++WT+ QLPNFLLA P LLLS   L E+
Sbjct:   80 VYGFVQAQYWGVGLFRYWTLQQLPNFLLAAPVLLLSAVGLTEY 122
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BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Match: A0A8J4FLR8_9CHLO (GPI mannosyltransferase 2 n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FLR8_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 9.740e-10
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 1 
Query:   13 IYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSLREFTSPRS 156
            +YGFIQ +YW+VG  ++WT+ QLPNFLLA P LLLS   L E+    S
Sbjct:  367 VYGFIQSEYWNVGLFRYWTLQQLPNFLLAAPVLLLSAAGLAEYCKANS 414
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113559.2829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836BTK8_9CHLO4.270e-1162.79GPI mannosyltransferase 2 n=1 Tax=Edaphochlamys de... [more]
A0A0U5HE00_ASPCI5.370e-1158.93GPI mannosyltransferase 2 n=1 Tax=Aspergillus cali... [more]
A0A067MV60_9AGAM1.070e-1069.23GPI mannosyltransferase 2 n=1 Tax=Botryobasidium b... [more]
A0A1E4TH35_9ASCO3.710e-1058.14GPI mannosyltransferase 2 n=1 Tax=Tortispora casei... [more]
A0A2J5I5I6_9EURO5.180e-1062.79GPI mannosyltransferase 2 n=3 Tax=Aspergillus TaxI... [more]
A0A7S0YNK3_9CHLO5.180e-1065.00GPI mannosyltransferase 2 n=1 Tax=Polytomella parv... [more]
A0A061H460_9BASI5.190e-1062.50GPI mannosyltransferase 2 n=2 Tax=Pseudozyma flocc... [more]
A0A017S6C3_9EURO7.080e-1060.42GPI mannosyltransferase 2 n=1 Tax=Aspergillus rube... [more]
A0A2J7ZFP7_9CHLO9.160e-1060.47GPI mannosyltransferase 2 (Fragment) n=1 Tax=Tetra... [more]
A0A8J4FLR8_9CHLO9.740e-1056.25GPI mannosyltransferase 2 n=1 Tax=Volvox reticulif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113559contigM-pyrifera_M_contig113559:420..578 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score62.4
Seed ortholog evalue7.4e-08
Seed eggNOG ortholog84751.XP_007880818.1
Preferred nameGPI18
KEGG koko:K07542
KEGG ReactionR05921
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ModuleM00065
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000030,GO:0003674,GO:0003824,GO:0004584,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031501,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0070085,GO:0071704,GO:0090407,GO:0097502,GO:0098827,GO:0120097,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
EggNOG free text desc.Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis
EggNOG OGs38F3K@33154,3N371@452284,3NYKS@4751,3V0S5@5204,COG5542@1,KOG2647@2759
COG Functional cat.G
CAZyGT76
Best tax levelUstilaginomycotina
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons1
Model size159
Cds size159
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815650.5815167-CDS-M-pyrifera_M_contig113559:419..5781622815650.5815167-CDS-M-pyrifera_M_contig113559:419..578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113559 420..578 +
1692277505.080635-CDS-M-pyrifera_M_contig113559:419..5781692277505.080635-CDS-M-pyrifera_M_contig113559:419..578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113559 420..578 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113559.2829.1prot_M-pyrifera_M_contig113559.2829.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113559 420..578 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113559.2829.1

>prot_M-pyrifera_M_contig113559.2829.1 ID=prot_M-pyrifera_M_contig113559.2829.1|Name=mRNA_M-pyrifera_M_contig113559.2829.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
LLHPIYGFIQEQYWDVGFLKFWTVSQLPNFLLATPTLLLSLWSLREFTSP
RST
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mRNA from alignment at M-pyrifera_M_contig113559:420..578+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113559.2829.1 ID=mRNA_M-pyrifera_M_contig113559.2829.1|Name=mRNA_M-pyrifera_M_contig113559.2829.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=159bp|location=Sequence derived from alignment at M-pyrifera_M_contig113559:420..578+ (Macrocystis pyrifera P11B4 male)
CTCCTGCATCCGATTTACGGTTTCATCCAAGAGCAGTATTGGGACGTTGG
GTTTCTGAAATTTTGGACAGTATCGCAACTCCCAAACTTTCTCTTGGCCA
CCCCCACGCTCCTTCTCTCCCTGTGGTCGTTGCGTGAATTCACTTCCCCT
CGTTCCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113559:420..578+

>mRNA_M-pyrifera_M_contig113559.2829.1 ID=mRNA_M-pyrifera_M_contig113559.2829.1|Name=mRNA_M-pyrifera_M_contig113559.2829.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig113559:420..578+ (Macrocystis pyrifera P11B4 male)
CTCCTGCATCCGATTTACGGTTTCATCCAAGAGCAGTATTGGGACGTTGG
GTTTCTGAAATTTTGGACAGTATCGCAACTCCCAAACTTTCTCTTGGCCA
CCCCCACGCTCCTTCTCTCCCTGTGGTCGTTGCGTGAATTCACTTCCCCT
CGTTCCACCCTCCTGCATCCGATTTACGGTTTCATCCAAGAGCAGTATTG
GGACGTTGGGTTTCTGAAATTTTGGACAGTATCGCAACTCCCAAACTTTC
TCTTGGCCACCCCCACGCTCCTTCTCTCCCTGTGGTCGTTGCGTGAATTC
ACTTCCCCTCGTTCCACC
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