mRNA_M-pyrifera_M_contig113523.2820.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113523.2820.1
Unique NamemRNA_M-pyrifera_M_contig113523.2820.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: A0A8H7BLV7_9FUNG (Multiprotein-bridging factor 1 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BLV7_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 1.400e-23
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:    1 PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            PPKV    VSV + +Q+GRQ KG TQK LAQ INEKP VVNDYE+GRAVPN Q+LGKMERALG K+RGK
Sbjct:   68 PPKVD---VSVGKALQKGRQDKGMTQKDLAQKINEKPQVVNDYESGRAVPNQQVLGKMERALGIKLRGK 133
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: A0A167NLG8_PHYB8 (Lambda repressor-like HTH type 3 transcription factor n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167NLG8_PHYB8)

HSP 1 Score: 95.1 bits (235), Expect = 1.940e-23
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:    1 PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            PPKV    VSV + IQ+GRQ K WTQK LAQ INEKP VVN+YE+G+A+PN Q+LGKMERALG K+RGK
Sbjct:   68 PPKVD---VSVGKAIQKGRQEKKWTQKDLAQQINEKPQVVNEYESGKAIPNQQVLGKMERALGIKLRGK 133
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: B6JV65_SCHJY (Transcriptional coactivator n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6JV65_SCHJY)

HSP 1 Score: 95.1 bits (235), Expect = 2.150e-23
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 1 
Query:   28 SVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            SVA+ IQ+GRQAKGW QK LAQ INEKP VVN+YENGRA+PN QIL KMERALG K+RG+
Sbjct:   77 SVAQAIQKGRQAKGWAQKDLAQRINEKPQVVNEYENGRAIPNQQILTKMERALGVKLRGQ 136
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: I1CJ37_RHIO9 (HTH cro/C1-type domain-containing protein n=3 Tax=Rhizopus TaxID=4842 RepID=I1CJ37_RHIO9)

HSP 1 Score: 94.7 bits (234), Expect = 2.970e-23
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:    1 PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            PPKV    VSV + IQQGRQAKG TQK LAQ INEKP VVN+YE+G+A+PN  ILGKMERALG K+RGK
Sbjct:   70 PPKVD---VSVGKAIQQGRQAKGITQKDLAQLINEKPQVVNEYESGKAIPNQNILGKMERALGIKLRGK 135
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: A0A1X2GGB9_9FUNG (MBF1-domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GGB9_9FUNG)

HSP 1 Score: 94.7 bits (234), Expect = 3.220e-23
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:    1 PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            PPKV    VSV + IQQGRQAKG TQK LAQ +NEKP VVN+YE G+AVPN QILGK+ERALG K+RGK
Sbjct:   73 PPKVD---VSVGKAIQQGRQAKGITQKDLAQLVNEKPQVVNEYEAGKAVPNQQILGKLERALGVKLRGK 138
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: UPI000D731A52 (endothelial differentiation-related factor 1-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D731A52)

HSP 1 Score: 94.7 bits (234), Expect = 3.570e-23
Identity = 45/63 (71.43%), Postives = 55/63 (87.30%), Query Frame = 1 
Query:   19 VKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            V + VA+ IQQGRQ+KG TQK LAQ INEKP V+N+YE+GRA+PNNQI+GK+ERALG K+RGK
Sbjct:   72 VSLDVAKLIQQGRQSKGLTQKDLAQRINEKPQVINEYESGRAIPNNQIMGKLERALGIKLRGK 134
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: MBF1_SCHPO (Multiprotein-bridging factor 1 n=2 Tax=Schizosaccharomyces TaxID=4895 RepID=MBF1_SCHPO)

HSP 1 Score: 93.6 bits (231), Expect = 8.680e-23
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 1 
Query:   28 SVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            SVA+ IQ+GRQAKGW QK L+Q INEKP VVNDYE+GRA+PN Q+L KMERALG K+RG+
Sbjct:   77 SVAQAIQKGRQAKGWAQKDLSQRINEKPQVVNDYESGRAIPNQQVLSKMERALGIKLRGQ 136
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: UPI0019398726 (endothelial differentiation-related factor 1 homolog n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019398726)

HSP 1 Score: 93.6 bits (231), Expect = 8.910e-23
Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 1 
Query:   16 TVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            TV + V R IQQGRQ KGWTQK+LA  INEKP V+N+YE G+A+PNNQ++GK+ER +G K+RGK
Sbjct:   73 TVSLDVGRLIQQGRQQKGWTQKELATKINEKPQVINEYERGQAIPNNQVMGKIERQIGLKLRGK 136
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: A0A433QVQ2_9FUNG (Multi protein bridging factor 1-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QVQ2_9FUNG)

HSP 1 Score: 93.2 bits (230), Expect = 1.200e-22
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 1 
Query:    1 PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            PPKV    +SV R IQQGRQA G TQK LAQ INEKP VVN+YE GRA+PN QILGK+ERALG K+RGK
Sbjct:   70 PPKVD---MSVGRAIQQGRQALGLTQKDLAQKINEKPQVVNEYEAGRAIPNQQILGKLERALGIKLRGK 135
[Close]
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Match: A0A8H7PQT5_MORIS (HTH cro/C1-type domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PQT5_MORIS)

HSP 1 Score: 92.8 bits (229), Expect = 1.650e-22
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 1 
Query:    1 PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVPNNQILGKMERALGTKIRGK 207
            PPKV    VSV + IQ+GRQ KG TQK+LAQ+INEKP VVN+YE+GRAVPN QILGK+ERAL  K+RGK
Sbjct:   69 PPKVD---VSVGKAIQKGRQDKGLTQKELAQSINEKPQVVNEYESGRAVPNQQILGKLERALAIKLRGK 134
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113523.2820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H7BLV7_9FUNG1.400e-2372.46Multiprotein-bridging factor 1 n=1 Tax=Apophysomyc... [more]
A0A167NLG8_PHYB81.940e-2369.57Lambda repressor-like HTH type 3 transcription fac... [more]
B6JV65_SCHJY2.150e-2376.67Transcriptional coactivator n=1 Tax=Schizosaccharo... [more]
I1CJ37_RHIO92.970e-2372.46HTH cro/C1-type domain-containing protein n=3 Tax=... [more]
A0A1X2GGB9_9FUNG3.220e-2372.46MBF1-domain-containing protein n=1 Tax=Hesseltinel... [more]
UPI000D731A523.570e-2371.43endothelial differentiation-related factor 1-like ... [more]
MBF1_SCHPO8.680e-2373.33Multiprotein-bridging factor 1 n=2 Tax=Schizosacch... [more]
UPI00193987268.910e-2365.63endothelial differentiation-related factor 1 homol... [more]
A0A433QVQ2_9FUNG1.200e-2272.46Multi protein bridging factor 1-domain-containing ... [more]
A0A8H7PQT5_MORIS1.650e-2271.01HTH cro/C1-type domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113523contigM-pyrifera_M_contig113523:9..218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score95.9
Seed ortholog evalue8e-18
Seed eggNOG ortholog936053.I1CJ37
Preferred nameMBF1
KEGG koko:K03627
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003712,GO:0003713,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.Mortierella verticillata NRRL 6337 transcription factor
EggNOG OGs1GU0G@112252,3A1NN@33154,3P40Q@4751,COG1813@1,KOG3398@2759
COG Functional cat.K
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size210
Cds size210
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815650.1478968-CDS-M-pyrifera_M_contig113523:8..2181622815650.1478968-CDS-M-pyrifera_M_contig113523:8..218Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113523 9..218 +
1692277504.9038544-CDS-M-pyrifera_M_contig113523:8..2181692277504.9038544-CDS-M-pyrifera_M_contig113523:8..218Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113523 9..218 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113523.2820.1prot_M-pyrifera_M_contig113523.2820.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113523 9..218 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113523.2820.1

>prot_M-pyrifera_M_contig113523.2820.1 ID=prot_M-pyrifera_M_contig113523.2820.1|Name=mRNA_M-pyrifera_M_contig113523.2820.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
PPKVQTVKVSVARRIQQGRQAKGWTQKQLAQAINEKPTVVNDYENGRAVP
NNQILGKMERALGTKIRGK*
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mRNA from alignment at M-pyrifera_M_contig113523:9..218+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113523.2820.1 ID=mRNA_M-pyrifera_M_contig113523.2820.1|Name=mRNA_M-pyrifera_M_contig113523.2820.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig113523:9..218+ (Macrocystis pyrifera P11B4 male)
CCTCCCAAGGTGCAGACGGTGAAGGTGTCGGTGGCGAGGAGGATCCAGCA
GGGCAGGCAGGCTAAGGGCTGGACGCAGAAGCAGCTGGCGCAGGCCATCA
ACGAGAAGCCCACCGTCGTGAACGACTACGAGAACGGCAGGGCGGTGCCC
AACAACCAGATCCTCGGCAAGATGGAGCGCGCGCTCGGCACCAAGATCCG
CGGCAAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113523:9..218+

>mRNA_M-pyrifera_M_contig113523.2820.1 ID=mRNA_M-pyrifera_M_contig113523.2820.1|Name=mRNA_M-pyrifera_M_contig113523.2820.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig113523:9..218+ (Macrocystis pyrifera P11B4 male)
CCTCCCAAGGTGCAGACGGTGAAGGTGTCGGTGGCGAGGAGGATCCAGCA
GGGCAGGCAGGCTAAGGGCTGGACGCAGAAGCAGCTGGCGCAGGCCATCA
ACGAGAAGCCCACCGTCGTGAACGACTACGAGAACGGCAGGGCGGTGCCC
AACAACCAGATCCTCGGCAAGATGGAGCGCGCGCTCGGCACCAAGATCCG
CGGCAAGTGACCTCCCAAGGTGCAGACGGTGAAGGTGTCGGTGGCGAGGA
GGATCCAGCAGGGCAGGCAGGCTAAGGGCTGGACGCAGAAGCAGCTGGCG
CAGGCCATCAACGAGAAGCCCACCGTCGTGAACGACTACGAGAACGGCAG
GGCGGTGCCCAACAACCAGATCCTCGGCAAGATGGAGCGCGCGCTCGGCA
CCAAGATCCGCGGCAAGTGA
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