mRNA_M-pyrifera_M_contig113497.2813.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113497.2813.1
Unique NamemRNA_M-pyrifera_M_contig113497.2813.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: A7RZK6_NEMVE (Palmitoyltransferase n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RZK6_NEMVE)

HSP 1 Score: 68.6 bits (166), Expect = 3.980e-11
Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 1 
Query:   46 EGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAF-ADQPKTAQLLLLRGADLHKQDRLHANTPLHTAAMKGSLACIKVLVRDGGDVSRAN 342
            EG + LH  + +G   ++ + L  G  VDLP+KNG TPL WAA+        ++L+  GA ++K D +H+NT LH A    +   I  + + G  +   N
Sbjct:   18 EGCTALHAAAQNGQTSIMAYLLAKGMDVDLPDKNGMTPLMWAAYRCFSVDAVRMLVTMGASVNKTDSVHSNTALHWAVSSNNHNVIHPIAKAGASIDLVN 117
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: A0A811YJA0_NYCPR ((raccoon dog) hypothetical protein n=1 Tax=Nyctereutes procyonoides TaxID=34880 RepID=A0A811YJA0_NYCPR)

HSP 1 Score: 65.1 bits (157), Expect = 6.540e-10
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1 
Query:   46 EGSSLLHYLSDSGHVDLLNWCLQHGGI-VDLPNKNGQTPLFWAAFADQPKTAQL-----LLLRGADLHKQDRLHANTPLHTAAMKGSLACIKVLVRDGGDV 330
            +G + +H+ + SG +  L   ++     VDLP  NGQTPL      D  KT  L     LL +GA L+ Q   + +TPLH AA +G L+C+KVLV++G DV
Sbjct:   91 KGFTAIHFAAQSGKLACLQVLVEEYNFPVDLPTNNGQTPLHLVIHGDN-KTMTLPCIHYLLKQGAALNTQT-CNGSTPLHMAAFRGLLSCVKVLVQNGADV 189
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: A0A3Q7NRG2_CALUR (ankyrin repeat domain-containing protein 53 n=10 Tax=Caniformia TaxID=379584 RepID=A0A3Q7NRG2_CALUR)

HSP 1 Score: 63.5 bits (153), Expect = 2.270e-9
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1 
Query:   46 EGSSLLHYLSDSGHVDLLNWCLQHGGI-VDLPNKNGQTPLFWAAFADQPKTAQL-----LLLRGADLHKQDRLHANTPLHTAAMKGSLACIKVLVRDGGDV 330
            +G + +H+ + SG +  L   ++     VDLP  NGQTPL      D  KT  L     LL +GA L+ Q   + +TPLH AA KG L+C+KVLV++G +V
Sbjct:   86 KGFTAIHFAAQSGKLTCLQVLVEEYKFPVDLPTNNGQTPLHLVIHGDN-KTMTLPCIHYLLKQGAALNTQT-CNGSTPLHLAACKGLLSCVKVLVQNGANV 184
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: G1MBK4_AILME (Ankyrin repeat domain 53 n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=G1MBK4_AILME)

HSP 1 Score: 63.5 bits (153), Expect = 2.280e-9
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1 
Query:   46 EGSSLLHYLSDSGHVDLLNWCLQHGGI-VDLPNKNGQTPLFWAAFADQPKTAQL-----LLLRGADLHKQDRLHANTPLHTAAMKGSLACIKVLVRDGGDV 330
            +G + +H+ + SG +  L   ++     VDLP  +GQTPL      D  KT  L     LL RGA L+ Q   + +TPLH AA KG L+C+KVLV++G +V
Sbjct:  105 KGFTAIHFAAQSGKLPCLQLLVEEYQFPVDLPTSSGQTPLHLVIHGDN-KTMTLPCIHYLLKRGAALNTQT-CNGSTPLHLAACKGLLSCVKVLVQNGANV 203
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: HTK16_HYDVU (Tyrosine-protein kinase HTK16 n=3 Tax=Hydra vulgaris TaxID=6087 RepID=HTK16_HYDVU)

HSP 1 Score: 63.2 bits (152), Expect = 3.250e-9
Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 1 
Query:   19 KSLVNARTSEGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAFADQPKTAQLLLLRG-ADLHKQDRLHANTPLHTAAMKGSLACIKVLV 312
            K  VNAR+  G + LH    +G  D++   L  G      + NG+TP+    F +   T  LL+ +G AD  K+   +   PLH AAM+GSL C+KVL+
Sbjct:  142 KENVNARSISGLTALHISCSNGDNDIVAMLLNAGADASAIDANGRTPVQVVCFYNHASTLHLLISKGSADFLKRSPNNGWVPLHEAAMRGSLECVKVLL 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: UPI00201EA8C8 (tyrosine-protein kinase HTK16-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI00201EA8C8)

HSP 1 Score: 63.2 bits (152), Expect = 3.260e-9
Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 1 
Query:   28 VNARTSEGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAFADQPKTAQLLLLRGADLHKQDRLHAN-TPLHTAAMKGSLACIKVLVRD 318
            VNA+   GS  LH  +  G+ +++   L  G  V + + NG T L  A  A+QP+  +LL+ +G  L  +        PLH AAM+G + CIKVL+ +
Sbjct:  192 VNAKNKIGSLALHDAAFHGYYEIVAQLLDRGADVKIKDTNGHTALHRACVANQPRVVELLIKKGRSLTSERCSQTGWVPLHEAAMRGHINCIKVLLEN 289
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: UPI0018D00D24 (LOW QUALITY PROTEIN: tyrosine-protein kinase HTK16 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D00D24)

HSP 1 Score: 60.8 bits (146), Expect = 2.100e-8
Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 1 
Query:   34 ARTSEGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAFADQPKTAQLLLLRG-ADLHKQDRLHANTPLHTAAMKGSLACIKVLVR 315
            A+  +G + +H  + +GH  +L   +  G  V++ +  G TPL +    + P T +LL+ RG A+   +       PLH AAM+G + CIKVL++
Sbjct:  164 AKNQDGQTAVHIAAKAGHDKILEKLIDSGATVNVRDSFGYTPLHYTCQNNLPSTTELLVTRGHANYQMRHAPTGQVPLHDAAMRGHIDCIKVLLK 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: UPI00067B2A36 (tyrosine-protein kinase shark n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067B2A36)

HSP 1 Score: 58.9 bits (141), Expect = 9.960e-8
Identity = 30/95 (31.58%), Postives = 53/95 (55.79%), Query Frame = 1 
Query:   34 ARTSEGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAFADQPKTAQLLLLRG-ADLHKQDRLHANTPLHTAAMKGSLACIKVLVR 315
            A+  +G + +H  + +G   +L   ++ G  V++ +  G TPL +    + P TA+LL+ +G A+   +  +    P+H AA KG L CIKVL++
Sbjct:  163 AKNKDGQTAVHIAARAGRDKILAKLIESGATVNVRDSFGYTPLHYTCQNNLPSTAELLITKGHANYQMRHAVTGKVPMHDAAQKGHLDCIKVLLK 257
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: A0A2M6V061_9BURK (Uncharacterized protein n=1 Tax=Limnohabitans sp. G3-2 TaxID=1100711 RepID=A0A2M6V061_9BURK)

HSP 1 Score: 58.2 bits (139), Expect = 1.070e-7
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 1 
Query:   49 GSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAFADQPKTAQLLLLRGADLHKQDRLHANTPLHTA---AMKGSLACIKVLVRDG 321
            G + LHY +  GHV ++++ L+H   +D  + NG TPL  AA    P++ +LL+  GADL+ +     NT   TA   A++G     K L+  G
Sbjct:  124 GWTALHYAASGGHVQVIDFLLEHSAYIDAESPNGTTPLMMAAMYGSPESVKLLIQAGADLNVK-----NTVGMTALDFAVRGKRQNAKELIETG 212
[Close]
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Match: UPI000679875A (tyrosine-protein kinase shark n=1 Tax=Papilio xuthus TaxID=66420 RepID=UPI000679875A)

HSP 1 Score: 58.5 bits (140), Expect = 1.320e-7
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 1 
Query:   34 ARTSEGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNGQTPLFWAAFADQPKTAQLLLLRG-ADLHKQDRLHANTPLHTAAMKGSLACIKVLVR 315
            A+  +G + +H  + +G  D+L   ++ G  V++ +  G TPL +    + P T +LL+ +G A+   +       PLH AA KG + C+KVL++
Sbjct:  163 AKNQDGQTAVHIAARAGRDDILAKLIESGATVNVRDSFGYTPLHYTCQNNLPSTTELLITKGNANYQMRHAPTGKVPLHDAAQKGHIECVKVLLK 257
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113497.2813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A7RZK6_NEMVE3.980e-1134.00Palmitoyltransferase n=2 Tax=Nematostella vectensi... [more]
A0A811YJA0_NYCPR6.540e-1040.59(raccoon dog) hypothetical protein n=1 Tax=Nyctere... [more]
A0A3Q7NRG2_CALUR2.270e-940.59ankyrin repeat domain-containing protein 53 n=10 T... [more]
G1MBK4_AILME2.280e-940.59Ankyrin repeat domain 53 n=1 Tax=Ailuropoda melano... [more]
HTK16_HYDVU3.250e-937.37Tyrosine-protein kinase HTK16 n=3 Tax=Hydra vulgar... [more]
UPI00201EA8C83.260e-935.71tyrosine-protein kinase HTK16-like n=2 Tax=Halioti... [more]
UPI0018D00D242.100e-832.63LOW QUALITY PROTEIN: tyrosine-protein kinase HTK16... [more]
UPI00067B2A369.960e-831.58tyrosine-protein kinase shark n=1 Tax=Amyelois tra... [more]
A0A2M6V061_9BURK1.070e-735.11Uncharacterized protein n=1 Tax=Limnohabitans sp. ... [more]
UPI000679875A1.320e-730.53tyrosine-protein kinase shark n=1 Tax=Papilio xuth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113497contigM-pyrifera_M_contig113497:2..349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score67.0
Seed ortholog evalue6.6e-09
Seed eggNOG ortholog45351.EDO43161
Preferred nameZDHHC13
KEGG koko:K20032
KEGG TC9.B.37.1,9.B.37.3
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0001505,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0006464,GO:0006497,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006887,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007276,GO:0007283,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0015031,GO:0015075,GO:0015095,GO:0015318,GO:0015693,GO:0015833,GO:0016020,GO:0016079,GO:0016192,GO:0016234,GO:0016235,GO:0016409,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0017156,GO:0018345,GO:0019538,GO:0019706,GO:0019707,GO:0019953,GO:0022414,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030133,GO:0030660,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032504,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0034220,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042802,GO:0042886,GO:0042953,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044703,GO:0044872,GO:0045055,GO:0045184,GO:0045202,GO:0046873,GO:0046903,GO:0046907,GO:0048232,GO:0048489,GO:0048518,GO:0048522,GO:0048609,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0055085,GO:0065007,GO:0065008,GO:0070201,GO:0070382,GO:0070838,GO:0071702,GO:0071704,GO:0071705,GO:0072511,GO:0090087,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1903830,GO:1904951
EggNOG free text desc.protein-cysteine S-acyltransferase activity
EggNOG OGs38DBC@33154,3B9BG@33208,COG5273@1,KOG0509@2759
EC2.3.1.225
COG Functional cat.S
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Exons1
Model size348
Cds size348
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815649.7528377-CDS-M-pyrifera_M_contig113497:1..3491622815649.7528377-CDS-M-pyrifera_M_contig113497:1..349Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113497 2..349 -
1692277504.7277086-CDS-M-pyrifera_M_contig113497:1..3491692277504.7277086-CDS-M-pyrifera_M_contig113497:1..349Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113497 2..349 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113497.2813.1prot_M-pyrifera_M_contig113497.2813.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113497 2..349 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113497.2813.1

>prot_M-pyrifera_M_contig113497.2813.1 ID=prot_M-pyrifera_M_contig113497.2813.1|Name=mRNA_M-pyrifera_M_contig113497.2813.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
MANRSAKSLVNARTSEGSSLLHYLSDSGHVDLLNWCLQHGGIVDLPNKNG
QTPLFWAAFADQPKTAQLLLLRGADLHKQDRLHANTPLHTAAMKGSLACI
KVLVRDGGDVSRANKE
back to top

mRNA from alignment at M-pyrifera_M_contig113497:2..349-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113497.2813.1 ID=mRNA_M-pyrifera_M_contig113497.2813.1|Name=mRNA_M-pyrifera_M_contig113497.2813.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig113497:2..349- (Macrocystis pyrifera P11B4 male)
ATGGCCAACAGGTCCGCCAAGTCGCTCGTCAACGCCCGCACCAGCGAGGG
CTCTTCGCTGCTCCACTACCTGAGCGATTCGGGCCATGTGGACCTGCTGA
ACTGGTGCCTGCAGCACGGCGGCATCGTGGACCTGCCCAACAAGAACGGC
CAGACGCCTCTCTTCTGGGCTGCCTTCGCCGACCAGCCCAAGACGGCCCA
GCTGCTGCTGCTGCGCGGCGCCGACCTGCACAAGCAGGACAGGCTGCACG
CAAACACCCCACTGCACACCGCAGCGATGAAGGGCAGCCTCGCCTGCATC
AAGGTGCTGGTGCGCGACGGTGGTGACGTGTCACGTGCCAACAAGGAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig113497:2..349-

>mRNA_M-pyrifera_M_contig113497.2813.1 ID=mRNA_M-pyrifera_M_contig113497.2813.1|Name=mRNA_M-pyrifera_M_contig113497.2813.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig113497:2..349- (Macrocystis pyrifera P11B4 male)
ATGGCCAACAGGTCCGCCAAGTCGCTCGTCAACGCCCGCACCAGCGAGGG
CTCTTCGCTGCTCCACTACCTGAGCGATTCGGGCCATGTGGACCTGCTGA
ACTGGTGCCTGCAGCACGGCGGCATCGTGGACCTGCCCAACAAGAACGGC
CAGACGCCTCTCTTCTGGGCTGCCTTCGCCGACCAGCCCAAGACGGCCCA
GCTGCTGCTGCTGCGCGGCGCCGACCTGCACAAGCAGGACAGGCTGCACG
CAAACACCCCACTGCACACCGCAGCGATGAAGGGCAGCCTCGCCTGCATC
AAGGTGCTGGTGCGCGACGGTGGTGACGTGTCACGTGCCAACAAGGAGAT
GGCCAACAGGTCCGCCAAGTCGCTCGTCAACGCCCGCACCAGCGAGGGCT
CTTCGCTGCTCCACTACCTGAGCGATTCGGGCCATGTGGACCTGCTGAAC
TGGTGCCTGCAGCACGGCGGCATCGTGGACCTGCCCAACAAGAACGGCCA
GACGCCTCTCTTCTGGGCTGCCTTCGCCGACCAGCCCAAGACGGCCCAGC
TGCTGCTGCTGCGCGGCGCCGACCTGCACAAGCAGGACAGGCTGCACGCA
AACACCCCACTGCACACCGCAGCGATGAAGGGCAGCCTCGCCTGCATCAA
GGTGCTGGTGCGCGACGGTGGTGACGTGTCACGTGCCAACAAGGAG
back to top