mRNA_M-pyrifera_M_contig113287.2779.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A6I6A791_9PLAN (CvpA family protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A791_9PLAN) HSP 1 Score: 366 bits (939), Expect = 1.590e-124 Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 1
Query: 1 LDHPDVPMHHDEDDPFHHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLLLDGG 579
LDHPDVPMHHD D PF H QHGDD+PFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDP+DREQFASEL SKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIV+AVLKDWKADLLL+GG
Sbjct: 173 LDHPDVPMHHDHDGPFDHXXQHGDDDPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPKDREQFASELSSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVIAVLKDWKADLLLNGG 365
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A518A4X7_9PLAN (Colicin V production protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4X7_9PLAN) HSP 1 Score: 324 bits (830), Expect = 3.930e-108 Identity = 158/193 (81.87%), Postives = 178/193 (92.23%), Query Frame = 1
Query: 1 LDHPDVPMHHDEDDPFHHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLLLDGG 579
L++P VPMHHD+DD FH + QH DDNPFPPGS+DLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYN+T PEDREQFA++LKS+IPGVLR VT W +GQPQ +VPT+NSTFGANG QQ+ SERTQLLK+IAAVYSDYP+AQ S+IEEFEL+LSGLPDQ+V+AVL+DWK DLLLDGG
Sbjct: 163 LNYPGVPMHHDDDDVFHDNHQHADDNPFPPGSNDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNSTAPEDREQFANQLKSQIPGVLRRVTSEWQDGQPQAAVPTNNSTFGANGTQQLASERTQLLKKIAAVYSDYPEAQNSLIEEFELNLSGLPDQVVMAVLRDWKTDLLLDGG 355
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A517RE34_9PLAN (Colicin V production protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RE34_9PLAN) HSP 1 Score: 265 bits (678), Expect = 4.430e-85 Identity = 133/198 (67.17%), Postives = 163/198 (82.32%), Query Frame = 1
Query: 1 LDHPDVPMHHDED-----DPFHHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLLLDGG 579
LDHP+VP+HH +D D HD HGDDNPFPPG++DLP+PFFE+ GG GSDVRTT QDSLLK+I+K IPSYLRGELEDK+IEAYNA DPEDRE FA+++KS+IPGVL+ VT++W GQP+ + P +++ F ANG QQ T ERT+LL+ IAAVYSDYP+ QK +IE FE DL G+PDQ+V+AVLKDW+ADLLL GG
Sbjct: 163 LDHPNVPIHHHDDGELFGDDHDHDH-HGDDNPFPPGTNDLPNPFFERSGGDGSDVRTTKQDSLLKEIIKSIPSYLRGELEDKVIEAYNAMDPEDRETFANQMKSQIPGVLQGVTEHWKNGQPKAAGPANDAQFDANGNQQTTVERTKLLQAIAAVYSDYPETQKDLIEGFEEDLIGVPDQVVMAVLKDWRADLLLIGG 359
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A6CDM6_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A6CDM6_9PLAN) HSP 1 Score: 264 bits (675), Expect = 1.540e-84 Identity = 136/204 (66.67%), Postives = 165/204 (80.88%), Query Frame = 1
Query: 1 LDHPDVPMH-HDEDDPF---HHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNST-FGANGAQQ------ITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLLLDGG 579
LDHP++ +H HD+DD F H QHGD NPFPPGS+DLP+PFFEK G GSDVRTT QDSLLK+ILK IPSYL+ ELEDK+IEAYNAT PEDR +FA EL+S+IPGVLR VT++W +GQPQ S+P D+S FG NG Q IT ERT+LL+ IAA+YSDYP+AQ S+IEEFE+ L+GLPDQ+V+A L+DW+ADLLL+GG
Sbjct: 163 LDHPEIDLHDHDDDDLFGSDHDHGQHGDHNPFPPGSNDLPNPFFEKSGSGGSDVRTTKQDSLLKEILKSIPSYLKSELEDKVIEAYNATAPEDRARFARELQSRIPGVLRNVTNDWQDGQPQTSLPADDSPLFGVNGGQSDPQAEGITRERTKLLRDIAAIYSDYPEAQNSLIEEFEITLTGLPDQVVLAALQDWRADLLLNGG 366
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A2E2C9M2_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C9M2_9PLAN) HSP 1 Score: 255 bits (651), Expect = 1.340e-80 Identity = 135/203 (66.50%), Postives = 161/203 (79.31%), Query Frame = 1
Query: 1 LDHPDVPMH-HDEDDPF---HHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQ------ITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLLLDGG 579
LDHP V +H H +D+ F H QH D NPFPPGS+DLP+PFFEK G GSDVRTT QDSLLK+ILK IPSYL+ ELEDK+IEAYNAT PEDRE+FA EL+S+IPGVLR VT++W +GQPQ S T+NS FG NG Q +T ERT+LL IAAVYSDYP+AQ S+IEEF+ L+GLPDQ+V+AVL+DW+ADLLL+GG
Sbjct: 191 LDHPGVDLHDHHDDELFGDDHDHDQHEDHNPFPPGSNDLPNPFFEKSGSGGSDVRTTKQDSLLKEILKSIPSYLKSELEDKVIEAYNATSPEDRERFARELQSRIPGVLRNVTNDWQDGQPQTS-STENSLFGPNGGQATPETQAVTQERTELLGGIAAVYSDYPEAQDSLIEEFDATLTGLPDQVVLAVLRDWRADLLLNGG 392
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A517WW40_9PLAN (Colicin V production protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WW40_9PLAN) HSP 1 Score: 227 bits (578), Expect = 5.280e-70 Identity = 120/198 (60.61%), Postives = 151/198 (76.26%), Query Frame = 1
Query: 1 LDHPDVPMH--HDEDDPFHHDRQH-GDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQ--ITSERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLLLDGG 579
L+HPDVP+ + +++ F DR+H G+ NPFPPGS+DLP+PFF G GS VRTTNQ+ LK+ILK IP YLRGELEDKIIEA+N+T PEDRE+FA +L S+IPGVLR V +NW GQP S + + F AN Q+ + ER LL+ IAA+YSDYP+AQ S+IEEFE LSGLPDQ+V+AVL+DW+AD+LL GG
Sbjct: 163 LNHPDVPVRDRNPDEELFGDDRKHQGEQNPFPPGSNDLPNPFFRGSEGDGSKVRTTNQEPSLKEILKSIPVYLRGELEDKIIEAFNSTAPEDREEFARQLTSRIPGVLRGVAENWQNGQPDSSTTSGSPLFDANRNQEEKLNPERAVLLRDIAAIYSDYPEAQNSLIEEFEESLSGLPDQVVMAVLRDWRADVLLTGG 360
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A350KEQ3_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KEQ3_9PLAN) HSP 1 Score: 183 bits (465), Expect = 6.430e-54 Identity = 95/137 (69.34%), Postives = 112/137 (81.75%), Query Frame = 1
Query: 1 LDHPDVPMH-HDEDDPF---HHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNST-FGANG 396
LDHP++ +H HD+DD F H QHGD NPFPPGS+DLP+PFFEK G GSDVRTT QDSLLK+ILK IPSYL+ ELEDK+IEAYNAT PEDR +FA EL+S+IPGVLR VT++W +GQPQ S+P D+S FGANG
Sbjct: 191 LDHPEIDLHDHDDDDLFGSDHDHGQHGDHNPFPPGSNDLPNPFFEKSGSGGSDVRTTKQDSLLKEILKSIPSYLKSELEDKVIEAYNATAPEDRARFARELQSRIPGVLRNVTNDWQDGQPQTSLPADDSPLFGANG 327
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: UPI001EE915E6 (CvpA family protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE915E6) HSP 1 Score: 101 bits (251), Expect = 6.770e-22 Identity = 55/156 (35.26%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 109 SPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSKIPGVLRTVTDNWGEGQPQVSVPTDNSTFGANGAQQITSE----RTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADL 564
SP S S T D+ + D++K+IP EL+ + E +TDP+DR + +L S +PGV+R V + W G+P N A+ + ++ R LL++IAA+Y+++ DAQ+S++EE L G+PD + V+VL+DW ADL
Sbjct: 206 SPISSGGNASKSPFGETVVDNSINDLVKKIPGLFSPELQQIVYETLQSTDPKDRPELVEKLSSGMPGVVRQVAEQWQNGKP------------TNAAEPLVTDWRQHRAYLLREIAAIYTEHTDAQRSIMEEVVYALHGVPDAVTVSVLEDWHADL 349
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A517TCD0_9PLAN (Colicin V production protein n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517TCD0_9PLAN) HSP 1 Score: 63.5 bits (153), Expect = 1.800e-8 Identity = 52/173 (30.06%), Postives = 79/173 (45.66%), Query Frame = 1
Query: 97 SDLPSPFFEKPGGSGSDVRTTNQDSLLKDILKRIPSYLRGELEDKIIEAYNATDPEDREQFASELKSK------IPGVLRTVTDNWGEGQPQVSVPTDNSTFGA--------NGAQQITSERT--QLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLL 567
++LP F E P S ++ N L + ++ + S ++ +++ + + + R F EL + +LR + +P S P N F + T+ T LL QIA VYSD +AQ+S+I E + LS +PDQIV VL DWKADLL
Sbjct: 188 NELPFDFPEFP--STNNTSENNPGKLFEQMISNMASKWGSQMIERVRKTFEQVPEDRRSGFVQELNQVTQDERGVESLLRLWAPD--SSKPSTSNPLQNDDFAPLPEYPSLPDEKSVTTNNETVDSLLHQIAEVYSDNENAQRSIISEAQRHLSSVPDQIVKPVLADWKADLL 356
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Match: A0A2D6SWA9_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SWA9_9PLAN) HSP 1 Score: 58.9 bits (141), Expect = 3.670e-8 Identity = 24/51 (47.06%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 415 ERTQLLKQIAAVYSDYPDAQKSMIEEFELDLSGLPDQIVVAVLKDWKADLL 567
+ +LL++I AVYSDYP A+ +++E+ E L G+PD++V ++L DW ADL+
Sbjct: 3 DHDRLLREIGAVYSDYPQARSAIVEDIEDALVGVPDELVPSILTDWHADLM 53 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113287.2779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113287.2779.1 >prot_M-pyrifera_M_contig113287.2779.1 ID=prot_M-pyrifera_M_contig113287.2779.1|Name=mRNA_M-pyrifera_M_contig113287.2779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp MHHDEDDPFHHDRQHGDDNPFPPGSSDLPSPFFEKPGGSGSDVRTTNQDSback to top mRNA from alignment at M-pyrifera_M_contig113287:2..580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113287.2779.1 ID=mRNA_M-pyrifera_M_contig113287.2779.1|Name=mRNA_M-pyrifera_M_contig113287.2779.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig113287:2..580+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113287:2..580+ >mRNA_M-pyrifera_M_contig113287.2779.1 ID=mRNA_M-pyrifera_M_contig113287.2779.1|Name=mRNA_M-pyrifera_M_contig113287.2779.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig113287:2..580+ (Macrocystis pyrifera P11B4 male)back to top |