mRNA_M-pyrifera_M_contig113193.2748.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: UPI0016650325 (AMP-binding protein n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI0016650325) HSP 1 Score: 260 bits (664), Expect = 2.910e-82 Identity = 127/155 (81.94%), Postives = 136/155 (87.74%), Query Frame = 1
Query: 1 TEFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
T+FEYFNDPAKTAE SADG+M++VGDVGYVDDDG+LYLTDRATFMIISGGVNIYPQE ENLLITHP VADAAVFGVPNEDLGEEVKAVVQ MPG+ DE EL+ FC EHL+RQK PRSIDFE ELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 362 TQFEYFNDPAKTAETRSADGSMSTVGDVGYVDDDGYLYLTDRATFMIISGGVNIYPQECENLLITHPKVADAAVFGVPNEDLGEEVKAVVQAMPGIEAGDELGRELMAFCAEHLARQKCPRSIDFEEELPRLPTGKLYKRLLRDRYWGNRTSRIV 516
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A533J7A0_9BRAD (Acyl-CoA synthetase (Fragment) n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533J7A0_9BRAD) HSP 1 Score: 257 bits (657), Expect = 1.350e-81 Identity = 128/153 (83.66%), Postives = 135/153 (88.24%), Query Frame = 1
Query: 7 FEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
FEYFNDPAKT EA SAD TM++VGDVGYVDDD FLYLTDRATFMIISGGVNIYPQE ENLLITHP +ADAAVFGVPN DLGEEVKAVVQ MPGVA S+E AEL+ FC + LSRQKVPRSIDFEAELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 330 FEYFNDPAKTKEARSADETMSTVGDVGYVDDDNFLYLTDRATFMIISGGVNIYPQECENLLITHPKIADAAVFGVPNADLGEEVKAVVQPMPGVAPSEELAAELIAFCNQSLSRQKVPRSIDFEAELPRLPTGKLYKRLLRDRYWGNKTSRIV 482
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A259MM58_9PROT (Acyl-CoA synthetase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MM58_9PROT) HSP 1 Score: 256 bits (655), Expect = 7.200e-81 Identity = 125/155 (80.65%), Postives = 138/155 (89.03%), Query Frame = 1
Query: 1 TEFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
T FEYFNDPAKT EA S DGTM++VGDVGYVD DG+L+LTDRATFMIISGGVNIYPQE ENLLITHP VADAAVFGVPN DLGEEVKAVVQLMPGV ++ T EL+ FCG+HL+RQKVPRS+DFE ELPRLPTGKLYKR LRDRYWG+ +SRI+
Sbjct: 366 TPFEYFNDPAKTREARSEDGTMSTVGDVGYVDADGYLHLTDRATFMIISGGVNIYPQECENLLITHPKVADAAVFGVPNADLGEEVKAVVQLMPGVPKTGATAEELIAFCGQHLARQKVPRSVDFEDELPRLPTGKLYKRLLRDRYWGDKKSRIV 520
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: UPI0016688D22 (AMP-binding protein n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI0016688D22) HSP 1 Score: 256 bits (654), Expect = 9.180e-81 Identity = 124/153 (81.05%), Postives = 131/153 (85.62%), Query Frame = 1
Query: 7 FEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
FEYFNDP KTAE S DGTMT+VGDVGYVDDD +LYLTDRATFMIISGGVNIYPQE ENLLITHP VADAAVFGVPNEDLGEEVKAVVQ MPG+ DE EL+ FC EHL+RQK PRS+DFE ELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 364 FEYFNDPEKTAETRSTDGTMTTVGDVGYVDDDNYLYLTDRATFMIISGGVNIYPQECENLLITHPKVADAAVFGVPNEDLGEEVKAVVQAMPGIEAGDELARELMAFCAEHLARQKCPRSVDFEEELPRLPTGKLYKRLLRDRYWGNRTSRIV 516
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A2S8LDM4_9MYCO (Acyl-CoA synthetase n=1 Tax=Mycobacterium sp. ITM-2016-00318 TaxID=2099693 RepID=A0A2S8LDM4_9MYCO) HSP 1 Score: 256 bits (653), Expect = 1.300e-80 Identity = 125/154 (81.17%), Postives = 135/154 (87.66%), Query Frame = 1
Query: 4 EFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
+F YFNDP KTAE+ SADGTMT+VGDVGYVDDDG+LYLTDRATFMIISGGVNIYPQE ENLLITHP VADAAVFGVPN+DLGEEVKAVVQ MPG+ + ELL FC EHLSRQKVPRSIDFEAELPRLPTGKLYKR LRDRYW + +RI+
Sbjct: 363 DFSYFNDPQKTAESRSADGTMTTVGDVGYVDDDGYLYLTDRATFMIISGGVNIYPQECENLLITHPKVADAAVFGVPNDDLGEEVKAVVQPMPGIDAGQDFADELLTFCSEHLSRQKVPRSIDFEAELPRLPTGKLYKRLLRDRYWNDHATRIV 516
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: UPI001BADAD7F (AMP-binding protein n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0283 TaxID=2807671 RepID=UPI001BADAD7F) HSP 1 Score: 255 bits (652), Expect = 1.830e-80 Identity = 126/153 (82.35%), Postives = 134/153 (87.58%), Query Frame = 1
Query: 7 FEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
FEYFNDPAKT EA SADGTM++VGDVGYVDDDG+LYLTDRATFMIISGGVNIYPQE ENLLITHP +ADAAVFGVPN DLGEEVKAVVQ MPGV+ E EL+ FC + LSRQKVPRSIDFEAELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 364 FEYFNDPAKTQEARSADGTMSTVGDVGYVDDDGYLYLTDRATFMIISGGVNIYPQECENLLITHPKIADAAVFGVPNPDLGEEVKAVVQPMPGVSPGPELADELIAFCSQSLSRQKVPRSIDFEAELPRLPTGKLYKRLLRDRYWGNKTSRIV 516
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A0R3KUZ4_9BRAD (Acyl-CoA synthetase n=19 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3KUZ4_9BRAD) HSP 1 Score: 255 bits (651), Expect = 2.580e-80 Identity = 126/155 (81.29%), Postives = 134/155 (86.45%), Query Frame = 1
Query: 1 TEFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
T FEYFNDP KT EA SADGTM++VGDVGYVDDDG+LYLTDRATFMIISGGVNIYPQE ENLLITHP +ADAAVFGVPN DLGEEVKAVVQ MPGV+ E EL+ FC + LSRQKVPRSIDFEAELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 362 TPFEYFNDPVKTQEARSADGTMSTVGDVGYVDDDGYLYLTDRATFMIISGGVNIYPQECENLLITHPKIADAAVFGVPNPDLGEEVKAVVQPMPGVSPGQELADELIAFCSQSLSRQKVPRSIDFEAELPRLPTGKLYKRLLRDRYWGNKTSRIV 516
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A1M7A877_9BRAD (Long-chain acyl-CoA synthetase n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M7A877_9BRAD) HSP 1 Score: 253 bits (647), Expect = 1.140e-79 Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 1
Query: 1 TEFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
T FEYF DPAKTAE+ S+DG+M++VGDVGYVDDDG+LYLTDRATFMIISGGVNIYPQE ENLLITHP +ADAAVFGVPN DLGEEVKAVVQ MPGVA E EL+ FC + LSRQKVPRSIDFEAELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 366 TPFEYFGDPAKTAESRSSDGSMSTVGDVGYVDDDGYLYLTDRATFMIISGGVNIYPQECENLLITHPKIADAAVFGVPNPDLGEEVKAVVQPMPGVAPGQELADELIAFCSQSLSRQKVPRSIDFEAELPRLPTGKLYKRLLRDRYWGNKTSRIV 520
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A1B1UQ57_9BRAD (Acyl-CoA synthetase n=12 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1B1UQ57_9BRAD) HSP 1 Score: 252 bits (643), Expect = 4.080e-79 Identity = 125/155 (80.65%), Postives = 132/155 (85.16%), Query Frame = 1
Query: 1 TEFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
T FEYFNDP KT EA S DG+M++VGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQE ENLLITHP +ADAAVFGVPN DLGEEVKAVVQ MPGV+ E EL+ FC LSRQKVPRSIDFEAELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 362 TPFEYFNDPGKTQEARSPDGSMSTVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQECENLLITHPKIADAAVFGVPNPDLGEEVKAVVQPMPGVSPGQELADELIAFCSRSLSRQKVPRSIDFEAELPRLPTGKLYKRLLRDRYWGNKTSRIV 516
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Match: A0A1Y6KPI5_9BRAD (Putative AMP-dependent synthetase putative long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase) n=2 Tax=Bradyrhizobium sp. ORS 285 TaxID=115808 RepID=A0A1Y6KPI5_9BRAD) HSP 1 Score: 242 bits (618), Expect = 4.450e-79 Identity = 121/153 (79.08%), Postives = 129/153 (84.31%), Query Frame = 1
Query: 7 FEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGGVNIYPQETENLLITHPSVADAAVFGVPNEDLGEEVKAVVQLMPGVAESDETVAELLRFCGEHLSRQKVPRSIDFEAELPRLPTGKLYKRTLRDRYWGEGQSRIL 465
FEYFNDP +T EA SADGTM++VGDVGYVD DG+LYLTDRATFMIISGGVNIYPQE ENLLITHP VADAAVFGVPN DLGEEVKAV+Q M GV E EL+ FC + LSRQKVPRSIDFE ELPRLPTGKLYKR LRDRYWG SRI+
Sbjct: 70 FEYFNDPERTREARSADGTMSTVGDVGYVDADGYLYLTDRATFMIISGGVNIYPQECENLLITHPKVADAAVFGVPNPDLGEEVKAVIQPMSGVMPGPELEEELIAFCRQSLSRQKVPRSIDFEKELPRLPTGKLYKRLLRDRYWGNKTSRIV 222 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113193.2748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113193.2748.1 >prot_M-pyrifera_M_contig113193.2748.1 ID=prot_M-pyrifera_M_contig113193.2748.1|Name=mRNA_M-pyrifera_M_contig113193.2748.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp TEFEYFNDPAKTAEATSADGTMTSVGDVGYVDDDGFLYLTDRATFMIISGback to top mRNA from alignment at M-pyrifera_M_contig113193:112..579- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113193.2748.1 ID=mRNA_M-pyrifera_M_contig113193.2748.1|Name=mRNA_M-pyrifera_M_contig113193.2748.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig113193:112..579- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113193:112..579- >mRNA_M-pyrifera_M_contig113193.2748.1 ID=mRNA_M-pyrifera_M_contig113193.2748.1|Name=mRNA_M-pyrifera_M_contig113193.2748.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig113193:112..579- (Macrocystis pyrifera P11B4 male)back to top |