mRNA_M-pyrifera_M_contig113059.2715.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A3D5DC78_9GAMM (YjgF_endoribonc domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC78_9GAMM) HSP 1 Score: 159 bits (403), Expect = 3.170e-48 Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 297
G++ SIE+GREAARLS+LNVLAQA AL GDLDRI+QIAKVSGFVNC E+TEVA VVNGASELFL+IFGERGAHARVAVGATTMP+GVAVEIEAIME+
Sbjct: 57 GVEFSIEQGREAARLSALNVLAQARRALGGDLDRIKQIAKVSGFVNCTPEITEVATVVNGASELFLEIFGERGAHARVAVGATTMPLGVAVEIEAIMEV 155
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A7Y0E030_9PROT (RidA family protein n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0E030_9PROT) HSP 1 Score: 125 bits (313), Expect = 1.420e-34 Identity = 63/100 (63.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 300
G DL++EEG+EAAR+ +LN++AQA AALDGDLDRI +I K+ GFVNC A+ T+ V+NGAS L DIFGE+GAHAR A+GA ++P+ VAVEI+A++EIA
Sbjct: 56 GGDLTLEEGQEAARVCALNIIAQAKAALDGDLDRIVRIVKLGGFVNCPADFTDHPKVINGASNLIGDIFGEKGAHARFAMGAGSLPLNVAVEIDAVIEIA 155
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A381Y852_9ZZZZ (YjgF_endoribonc domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381Y852_9ZZZZ) HSP 1 Score: 124 bits (310), Expect = 4.540e-34 Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 297
G +L++EEGREAARLS+LNVLA AL GDLDRI + KV+GFV+ + EVAAVVNGASEL +IFG+ G HAR+A+GA MPIGVAVEIEAI+EI
Sbjct: 57 GKNLTLEEGREAARLSTLNVLAHTRNALAGDLDRINRFLKVNGFVSVTEDFDEVAAVVNGASELLQEIFGDAGTHARIAIGAANMPIGVAVEIEAIIEI 155
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: UPI001A96A976 (RidA family protein n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A96A976) HSP 1 Score: 119 bits (297), Expect = 3.790e-32 Identity = 60/100 (60.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 300
G D ++E+GREAARL LN+LAQA AAL GDLDR+ ++ ++ GFVN A+ + AV+NGASEL LD+FGE G HAR AVGA ++P VAVE++AI EIA
Sbjct: 56 GQDFTVEQGREAARLCGLNILAQARAALGGDLDRVVRVLRLGGFVNSGADFHDHPAVINGASELMLDVFGEAGKHARAAVGAPSLPANVAVEVDAIFEIA 155
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A6N7FGF2_9PROT (RidA family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FGF2_9PROT) HSP 1 Score: 119 bits (297), Expect = 4.010e-32 Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEA 285
G D ++ EGREAARLS+LNVLA A AAL GDLDRI ++AK+ G+VN ++T VA VVNGASEL +++FGE G HAR G T MP GVA+E+EA
Sbjct: 57 GADFTVAEGREAARLSALNVLAHARAALGGDLDRIEKVAKLRGYVNATEDLTMVAEVVNGASELMVEVFGEAGQHARTVAGVTVMPFGVAIEVEA 151
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A2E4XT31_9PROT (YjgF_endoribonc domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XT31_9PROT) HSP 1 Score: 118 bits (296), Expect = 5.370e-32 Identity = 55/97 (56.70%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIM 291
G D S+E+ ++AAR+ LN++AQA AALDGDLDR+R+I KV GFVNC + + A++NGAS+LF+++FG+ G HAR AVGA ++P+GVAVE++AI+
Sbjct: 56 GDDYSVEDAQQAARVCGLNIIAQAKAALDGDLDRVRRIVKVGGFVNCVTDFGQHPAIINGASDLFVEVFGDAGRHARFAVGAGSLPMGVAVEVDAII 152
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A127CHJ0_9HYPH (YjgF_endoribonc domain-containing protein n=6 Tax=Hyphomicrobiales TaxID=356 RepID=A0A127CHJ0_9HYPH) HSP 1 Score: 118 bits (295), Expect = 7.620e-32 Identity = 58/99 (58.59%), Postives = 78/99 (78.79%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 297
G D+S+EEGR+AAR ++N++AQ +AALDGDLDR+++I K+SGFV A + TE V+NGAS+LF D+FGE G HAR AVG +P+ AVEI+AI+EI
Sbjct: 56 GADVSLEEGRKAARACAINIIAQINAALDGDLDRVKRILKLSGFVASAPDFTEQHLVINGASDLFADVFGEAGKHARAAVGMAALPLNAAVEIDAIVEI 154
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A239EDW1_9PROT (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239EDW1_9PROT) HSP 1 Score: 116 bits (291), Expect = 3.080e-31 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 300
G SIEEGREAAR +LN++AQA AALDGDLDRI ++ K+ GFVN + + V+NGASEL ++FGE G HAR AV A+++P+GVAVE+EAI E+A
Sbjct: 56 GAGYSIEEGREAARTCALNLIAQAKAALDGDLDRITRVVKLVGFVNSTGDFNDQPKVINGASELMQEVFGEAGRHARSAVSASSLPLGVAVEVEAIFEVA 155
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A8J7V1K4_9PROT (RidA family protein n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7V1K4_9PROT) HSP 1 Score: 116 bits (291), Expect = 3.080e-31 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEIA 300
G D S+EEG+EAAR +LN++AQ ALDGDLDR+ +I K+ GFVN + T+ V+NGAS L DIFGE+G H R AVGA ++P+GVAVE+EAI+E+A
Sbjct: 56 GRDFSLEEGQEAARACALNIVAQVKRALDGDLDRVARIVKLGGFVNSTPDYTDHPKVINGASNLMGDIFGEKGQHTRFAVGAGSLPLGVAVEVEAIVEVA 155
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Match: A0A2E4GZW0_9PROT (YjgF_endoribonc domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4GZW0_9PROT) HSP 1 Score: 115 bits (289), Expect = 6.190e-31 Identity = 57/99 (57.58%), Postives = 78/99 (78.79%), Query Frame = 1
Query: 1 GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEVTEVAAVVNGASELFLDIFGERGAHARVAVGATTMPIGVAVEIEAIMEI 297
G D SIE ++AAR+ LN++AQA AAL GDLDR+R+I KV GFVNC ++ AV+NGAS+LF+++FG+ G HAR AVGA ++P+GVAVE++AI+ I
Sbjct: 56 GDDYSIENAQKAARICGLNIIAQAKAALKGDLDRVRRIVKVGGFVNCTNGFSQHPAVINGASDLFVEVFGDAGRHARFAVGAASLPMGVAVEVDAIIVI 154 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113059.2715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113059.2715.1 >prot_M-pyrifera_M_contig113059.2715.1 ID=prot_M-pyrifera_M_contig113059.2715.1|Name=mRNA_M-pyrifera_M_contig113059.2715.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp GLDLSIEEGREAARLSSLNVLAQASAALDGDLDRIRQIAKVSGFVNCAAEback to top mRNA from alignment at M-pyrifera_M_contig113059:275..580- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113059.2715.1 ID=mRNA_M-pyrifera_M_contig113059.2715.1|Name=mRNA_M-pyrifera_M_contig113059.2715.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig113059:275..580- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113059:275..580- >mRNA_M-pyrifera_M_contig113059.2715.1 ID=mRNA_M-pyrifera_M_contig113059.2715.1|Name=mRNA_M-pyrifera_M_contig113059.2715.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig113059:275..580- (Macrocystis pyrifera P11B4 male)back to top |