mRNA_M-pyrifera_M_contig113056.2713.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: A0A6P0RRW8_9CYAN (Gfo/Idh/MocA family oxidoreductase n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0RRW8_9CYAN) HSP 1 Score: 250 bits (638), Expect = 6.910e-75 Identity = 117/180 (65.00%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 25 MLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
++VIATRH +H+ QV+ LKAGKHVFVEKPLA TW +LD I ++ + P+LM+GFNRRFSPA+Q LK+ + R+SPL+I YRLNGGYI + W+QT+QG GRN+GEACHMYD FR L APV I ATAINP+ YQRNDNF ATL Y+DGSV L YTALGPK GL KE+VEVFC
Sbjct: 608 LVVIATRHSDHASQVVQSLKAGKHVFVEKPLALTWEELDAIITTYESLKHKPLLMIGFNRRFSPALQALKEVIDKRRSPLIINYRLNGGYIPQESWIQTQQGGGRNLGEACHMYDVFRSLADAPVTSITATAINPSTLPYQRNDNFCATLAYQDGSVGNLVYTALGPKQGLPKERVEVFC 787
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: A0A2W1MKK4_9PSED (Oxidoreductase n=4 Tax=Pseudomonas TaxID=286 RepID=A0A2W1MKK4_9PSED) HSP 1 Score: 248 bits (634), Expect = 1.880e-74 Identity = 121/183 (66.12%), Postives = 138/183 (75.41%), Query Frame = 1
Query: 16 DVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
DV MLVIATRH EH+ Q +AGLKAGKHVFVEKPLA TW QLD + D+ N P+LMVGFNRRFSPA+Q L++ +SNR +PL I YRLNGGYI HW+QTEQG GRNIGEACHMYD FR L GA V ++AT INP Y DNF AT+ Y DGS+ L YTALGPK GL KE++EVFC
Sbjct: 583 DVHMLVIATRHCEHAFQAMAGLKAGKHVFVEKPLAITWEQLDALVECHDSLANPPLLMVGFNRRFSPAIQALREVLSNRTAPLAINYRLNGGYIPLDHWIQTEQGGGRNIGEACHMYDVFRCLAGAAVISVSATGINPGARPYLVTDNFSATVGYADGSIGNLFYTALGPKQGLPKERIEVFC 765
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: A0A2V8BMC1_9BACT (Oxidoreductase n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8BMC1_9BACT) HSP 1 Score: 247 bits (631), Expect = 7.700e-74 Identity = 118/180 (65.56%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 25 MLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
++VIATRHHEH+ QV+ LKAGKHVFVEKPLA +W+QLD + + + + P+LMVGFNRRFSPA+ +++ V+ R++PLMI+YRLNGGYI WVQ EQG GRNIGEACHMYD FR LTGAPV I AT I+P Y RNDNF ATL YEDGSVA L YTALGPK G+ KE++EVFC
Sbjct: 619 LMVIATRHHEHTAQVVECLKAGKHVFVEKPLAISWSQLDAVVSTYNGLEDKPLLMVGFNRRFSPAVTEVRKLVAGRRAPLMIEYRLNGGYIPLDSWVQGEQGGGRNIGEACHMYDVFRSLTGAPVKSITATPIDPGTLPYLRNDNFAATLGYEDGSVANLVYTALGPKTGMGKERIEVFC 798
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: UPI000364C962 (bi-domain-containing oxidoreductase n=1 Tax=Curvibacter lanceolatus TaxID=86182 RepID=UPI000364C962) HSP 1 Score: 246 bits (629), Expect = 9.780e-74 Identity = 119/188 (63.30%), Postives = 142/188 (75.53%), Query Frame = 1
Query: 1 VVTRDDVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
V+ + + +LVIATRH+EH+ Q +AGL+AGKHVFVEKPLA W +LD++ A P LMVGFNRRFSPA+ L+Q + R+SPL+I YRLNGGYI HW+QT GAGRNIGEACHMYD FR L GAPV I+A++INP Y R+DNFVATL YEDGSV L YTALGPK GL KE++EVFC
Sbjct: 581 VLEDEAINLLVIATRHNEHAAQTLAGLQAGKHVFVEKPLAVHWEELDQLVQAYRALEAPPQLMVGFNRRFSPALLQLRQILQGRRSPLIINYRLNGGYIPLDHWIQTADGAGRNIGEACHMYDVFRSLAGAPVSRISASSINPGALPYARSDNFVATLAYEDGSVGNLVYTALGPKKGLPKERIEVFC 768
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: UPI00039DD69C (bi-domain-containing oxidoreductase n=2 Tax=Pseudomonas fuscovaginae TaxID=50340 RepID=UPI00039DD69C) HSP 1 Score: 244 bits (623), Expect = 1.130e-72 Identity = 118/183 (64.48%), Postives = 136/183 (74.32%), Query Frame = 1
Query: 16 DVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
DV MLVIATRH EH+ Q IAGL AGKHVFVEKP+A TW +LD + DA N P+LMVGFNRRFSPA+Q L++ ++ R +PL I YRLNGGYI HW+QTEQG GRNIGEACHMYD FR L GA V ++AT INP Y DNF AT+ Y DGS+ L YTALGPK GL KE++EVFC
Sbjct: 617 DVHMLVIATRHCEHASQAIAGLNAGKHVFVEKPVAITWDELDALTECHDALENPPLLMVGFNRRFSPAIQALREVLAGRTAPLAINYRLNGGYIPLDHWIQTEQGGGRNIGEACHMYDVFRCLAGAVVTTVSATGINPGGRPYLATDNFSATVGYADGSIGNLFYTALGPKQGLPKERIEVFC 799
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: UPI001688FACC (bi-domain-containing oxidoreductase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001688FACC) HSP 1 Score: 243 bits (620), Expect = 2.490e-72 Identity = 113/180 (62.78%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 25 MLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
++VI+TRH EH+EQV LKAGKHVFVEKPLA +W +LD + ++ P++MVGFNRRFSPA+Q LKQ + R+SPL++ YRLNGGYI W+QT+QG GRN+GEACHMYD FR+L APV I+AT+I+PA YQRNDNF ATL Y+DGSV L YTALGPK GL KE++EV+C
Sbjct: 609 LVVISTRHCEHAEQVSQSLKAGKHVFVEKPLALSWEELDLVVKTYESLEQRPLVMVGFNRRFSPALQALKQALQERRSPLIVNYRLNGGYIPLDSWIQTQQGGGRNLGEACHMYDVFRFLADAPVTSISATSIDPAALPYQRNDNFCATLAYQDGSVGNLVYTALGPKQGLPKERIEVYC 788
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: A0A7T0C570_9BACT (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0C570_9BACT) HSP 1 Score: 239 bits (611), Expect = 3.780e-71 Identity = 112/183 (61.20%), Postives = 139/183 (75.96%), Query Frame = 1
Query: 16 DVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
D ++VI+TRH EH+ Q + LKAGKHVFVEKPLA WA+LD+I + + P+LMVGFNRRFSPAMQ L + ++NR++PL++ YRLNGGYI HWVQ QG GRNIGEACHMYD FR+L G+ V INA++I+P Y ++DNF AT+ YEDGSV LTY ALGPK GL KE++EVFC
Sbjct: 588 DFDLMVISTRHQEHASQTVDCLKAGKHVFVEKPLALNWAELDQISQTYNELESPPLLMVGFNRRFSPAMQNLHKTLANRRTPLVVNYRLNGGYIPLDHWVQGPQGGGRNIGEACHMYDVFRFLAGSAVQSINASSIDPGALPYLKSDNFCATMTYEDGSVGNLTYIALGPKKGLPKERIEVFC 770
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: S7TKF5_9DELT (Oxidoreductase domain protein n=1 Tax=Desulfovibrio sp. X2 TaxID=941449 RepID=S7TKF5_9DELT) HSP 1 Score: 239 bits (609), Expect = 1.360e-70 Identity = 117/191 (61.26%), Postives = 142/191 (74.35%), Query Frame = 1
Query: 1 VVTRDDVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQL---DEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
+ R+D+ +LV+ATRH +H+ VIA L AGKHVFVEKPLATTW +L DE A N P++MVGFNRRFSPA+Q L+ ++ R PL I YRLNGG+IAA HW+QT +G GRNIGEACHMYD FR L+GAPVC I A A+ P + Q NDNF A L Y+DGS +TLTYTALGPK GL KE++E+FC
Sbjct: 611 MAAREDIDLLVVATRHDQHARTVIAALAAGKHVFVEKPLATTWDELRLVDEAWRQSRALANPPLVMVGFNRRFSPAVQALQAALAGRSGPLQILYRLNGGFIAASHWIQTSEGGGRNIGEACHMYDVFRALSGAPVCSIQAAAVAPNGTRLQ-NDNFSACLTYDDGSQSTLTYTALGPKAGLPKERIEIFC 800
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: A0A2V8DK93_9BACT (Oxidoreductase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DK93_9BACT) HSP 1 Score: 238 bits (606), Expect = 2.140e-70 Identity = 110/188 (58.51%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 1 VVTRDDVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
V+ + ++VIATRHHEH++QV+ L+AGKHVFVEKPLA +W +LD I A + P+L+VGFNRRFSPA+ +K + R++P++++YRLN GYI HWV QG GRNIGEACHMYD FR+L GAPV I AT I+P YQRNDNF AT+ YE+GS+A L YT+LGPK GL KE++EVFC
Sbjct: 584 VLQDHSIDVVVIATRHHEHADQVVRALEAGKHVFVEKPLALSWRELDRIAAVYHGLESAPLLLVGFNRRFSPALTMIKTLIDGRRAPVVVEYRLNAGYIPLDHWVHGPQGGGRNIGEACHMYDVFRFLAGAPVKSIAATPIDPGTLPYQRNDNFSATIGYENGSLAHLLYTSLGPKTGLGKERIEVFC 771
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Match: A0A2V8ALT3_9BACT (Oxidoreductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8ALT3_9BACT) HSP 1 Score: 236 bits (601), Expect = 2.790e-70 Identity = 113/188 (60.11%), Postives = 136/188 (72.34%), Query Frame = 1
Query: 1 VVTRDDVQMLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNMPMLMVGFNRRFSPAMQTLKQQVSNRKSPLMIQYRLNGGYIAAKHWVQTEQGAGRNIGEACHMYDCFRYLTGAPVCEINATAINPADSIYQRNDNFVATLRYEDGSVATLTYTALGPKNGLAKEQVEVFC 564
V+ + ++VIATRHHEH+ QV L+AGKHVFVEKPLA TW +L I A + LMVGFNRRFSPA++ LK +++ R+SPLMI+YR+N GYI HWV QG GRNIGEACHMYD FR+L GA V I A AI+PA Y RNDNF AT+ YEDG++ATL YTALGPK G+ KE + VFC
Sbjct: 486 VLADASIDLVVIATRHHEHAAQVKRSLEAGKHVFVEKPLALTWEELSSIAATYTSLETRTALMVGFNRRFSPALEILKARLAARRSPLMIEYRVNAGYIPLDHWVHGTQGGGRNIGEACHMYDVFRFLAGAAVRSIGAAAIDPASLAYARNDNFTATVAYEDGTLATLVYTALGPKTGMGKEHITVFC 673 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113056.2713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113056.2713.1 >prot_M-pyrifera_M_contig113056.2713.1 ID=prot_M-pyrifera_M_contig113056.2713.1|Name=mRNA_M-pyrifera_M_contig113056.2713.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp MLVIATRHHEHSEQVIAGLKAGKHVFVEKPLATTWAQLDEIQAFLDAQMNback to top mRNA from alignment at M-pyrifera_M_contig113056:1..564- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113056.2713.1 ID=mRNA_M-pyrifera_M_contig113056.2713.1|Name=mRNA_M-pyrifera_M_contig113056.2713.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig113056:1..564- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113056:1..564- >mRNA_M-pyrifera_M_contig113056.2713.1 ID=mRNA_M-pyrifera_M_contig113056.2713.1|Name=mRNA_M-pyrifera_M_contig113056.2713.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig113056:1..564- (Macrocystis pyrifera P11B4 male)back to top |