mRNA_M-pyrifera_M_contig113039.2708.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113039.2708.1
Unique NamemRNA_M-pyrifera_M_contig113039.2708.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: F0ZSA3_DICPU (Peptidase S53 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZSA3_DICPU)

HSP 1 Score: 179 bits (454), Expect = 1.930e-50
Identity = 90/160 (56.25%), Postives = 107/160 (66.88%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS R     WQ SVV TYL + V LP S+ +NS+NRGFPDVSALGHNY +   D    VDGTSCS+PV+  I ALLNSY  NNN++   FINP+LY A     + F DI  G+N CTE+ C + GY    GWD VTGLGTP+F  LL+Y+  L
Sbjct:  431 TGGGFSDYSPRPS---WQSSVVETYLNSGVALPASNFFNSSNRGFPDVSALGHNYYVVAGDQMQVVDGTSCSSPVFGAIVALLNSYRFNNNKSPLGFINPVLYAAAASNNNAFTDITTGDNKCTEACCAKTGYLATKGWDPVTGLGTPNFKGLLAYVQTL 587          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: F4PRY0_CAVFA (Physaropepsin n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PRY0_CAVFA)

HSP 1 Score: 176 bits (445), Expect = 4.790e-49
Identity = 88/160 (55.00%), Postives = 108/160 (67.50%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS    +  WQ S VN YL++ V LPPS  +NS+NRGFPDVSALGHNY I +      VDGTSCS+PV+ G+ ALLNSY LNN +    F+NPL+Y A     + + DI  GNN CTES C +YGY    GWD +TG GTP+F+ LL+Y+  L
Sbjct:  449 TGGGFSDYS---PVPSWQASAVNAYLKSGVALPPSQYFNSSNRGFPDVSALGHNYAIFLSGGIEQVDGTSCSSPVFGGMIALLNSYRLNNKKPTLGFLNPLIYSA---PSNCWNDITTGNNKCTESCCSKYGYLATAGWDPLTGRGTPNFANLLTYVKTL 602          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: Q54G77_DICDI (Peptidase S53 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54G77_DICDI)

HSP 1 Score: 175 bits (444), Expect = 6.230e-49
Identity = 89/160 (55.62%), Postives = 104/160 (65.00%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS +     WQ   VN YL + V LP    +N++NRGFPDVS LGHNY I   D    VDGTSCS+PV  GI ALLNSY L+N ++   FINP+LY AY   P+ F DI  GNN CTES C   G+    GWDAVTGLG+P+F  LLSY+  L
Sbjct:  441 TGGGFSNYSPQPA---WQSKAVNAYLNSGVVLPNKKFFNASNRGFPDVSGLGHNYYIVAADQMNLVDGTSCSSPVIGGIVALLNSYRLDNGKSTLGFINPVLYAAYASNPAAFNDITVGNNYCTESCCATTGFVATKGWDAVTGLGSPNFKPLLSYIQSL 597          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: PHYSA_PHYPO (Physarolisin n=1 Tax=Physarum polycephalum TaxID=5791 RepID=PHYSA_PHYPO)

HSP 1 Score: 172 bits (437), Expect = 4.640e-48
Identity = 85/160 (53.12%), Postives = 109/160 (68.12%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS +     +Q++ V  Y ++ V LPP +D+N++NRGFPDVSALGHNYLI +   +  VDGTS S PV+A I A LNSY LNN +   AF  PL+YQA+   P+IF DI  G+N CTE  C ++GY    GWD VTG+GTP FS LL+++  L
Sbjct:  418 TGGGFSDYSLQPS---YQNAAVAAYFKSGVPLPPQTDFNASNRGFPDVSALGHNYLIALSGDFEQVDGTSASTPVFAAIIAHLNSYRLNNGKPPLAFAVPLIYQAFASDPTIFNDITTGDNKCTEDCCSKFGYEATKGWDPVTGVGTPVFSKLLAFVQTL 574          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: UPI000644F25B (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F25B)

HSP 1 Score: 172 bits (436), Expect = 8.100e-48
Identity = 90/158 (56.96%), Postives = 103/158 (65.19%), Query Frame = 1
Query:    7 GGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            GGFS +S    L  WQ S V  YL + V LP +S YNS+NRGFPDVSALGHNY I       +VDGTS S PVW GI ALLNSY LNNN+    FINPLLY A     ++F DI  GNN+CTE  C  YG+  + GWD VTGLGTP F  LL+Y+  L
Sbjct:  439 GGFSYFS---PLPSWQSSAVEAYLNSGVPLPSASIYNSSNRGFPDVSALGHNYGIYAYGGLENVDGTSASTPVWGGIIALLNSYRLNNNKPTLGFINPLLYSA---PATVFNDITIGNNSCTEFCCSPYGFTASKGWDPVTGLGTPIFKNLLAYIQTL 590          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: D3B6M3_POLPP (Physaropepsin n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B6M3_POLPP)

HSP 1 Score: 169 bits (429), Expect = 8.170e-47
Identity = 89/160 (55.62%), Postives = 103/160 (64.38%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS   E   WQ + V+ YL + V LP S  +NS NRGFPDVSALGHNY I        VDGTSCS+PV+  + ALLNSY LNNN+    FINPLLY A     S F DI  G+N CTES C ++G+    GWD VTGLGTP F  LL+Y+  L
Sbjct:  436 TGGGFSDYSPVPE---WQQAQVSAYLSSGVPLPASQYFNSTNRGFPDVSALGHNYAIIASSQIEQVDGTSCSSPVFGAVVALLNSYRLNNNKPTLGFINPLLYSA---PSSAFTDITAGDNKCTESCCSKFGFTATKGWDPVTGLGTPVFKNLLAYVQTL 589          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: UPI000644E8E9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E8E9)

HSP 1 Score: 169 bits (429), Expect = 8.170e-47
Identity = 88/160 (55.00%), Postives = 104/160 (65.00%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS    +  WQ + V  YL++ V LPPS+ +N++NRGFPDVSALGHNY+I        VDGTSCS+PVW  I ALLNSY  NNN+    F+NPLLY A     + + DI  GNN CTE  C   GY   TGWD VTGLGTP F  LL+Y+  L
Sbjct:  436 TGGGFSDYS---PVPSWQATQVAAYLKSGVVLPPSTVFNASNRGFPDVSALGHNYVIIASGQSEVVDGTSCSSPVWGAIVALLNSYRFNNNKPALGFLNPLLYSA---PANCYTDITSGNNKCTEQCCDANGYIATTGWDPVTGLGTPVFKNLLAYVQTL 589          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: F0Z9R8_DICPU (Peptidase S53 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z9R8_DICPU)

HSP 1 Score: 165 bits (418), Expect = 3.170e-45
Identity = 84/160 (52.50%), Postives = 102/160 (63.75%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS Y  R     WQ  VV+ YL +   LP S  +NS+NRGFPDVSALGHNY I +  +   VDGTS S+PV+  I +LLNSY  NNN++   FINP+LY A     + F DI  G+N CT   C + GY  A GWD VTGLGTP+F  LL+Y+  L
Sbjct:  434 TGGGFSNYIPRPS---WQSDVVDAYLNSGTPLPASKYFNSSNRGFPDVSALGHNYYIVLGGNPTPVDGTSASSPVFGAIISLLNSYRFNNNKSPLGFINPVLYAAAASNNNAFTDITSGDNKCTTQCCSKVGYVAAKGWDPVTGLGTPNFKGLLAYIQTL 590          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: A0A151Z8W0_9MYCE (Physaropepsin n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z8W0_9MYCE)

HSP 1 Score: 161 bits (407), Expect = 1.190e-43
Identity = 81/160 (50.62%), Postives = 103/160 (64.38%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            +GGGFS YS    +  +Q + VN YL + V LP +  +N+ NRGFPDVSALGHNY I    +   VDGTSCS+PV+ GI ALLNS  LNN +    F+NP LY A     + F DI  GNN CTES C ++G+   +GWDA +GLGTP F +L +Y+  L
Sbjct:  434 SGGGFSDYS---PMPSYQQTAVNAYLNSGVKLP-TGKFNATNRGFPDVSALGHNYWIVASGAGQIVDGTSCSSPVFGGIVALLNSIRLNNGKATLGFLNPFLYAAQAADSTTFTDITSGNNLCTESCCAKFGFQATSGWDAASGLGTPQFKSLANYVESL 589          
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Match: A0A8J4Q2I7_9MYCE (Peptidase S53 domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2I7_9MYCE)

HSP 1 Score: 160 bits (404), Expect = 3.310e-43
Identity = 80/160 (50.00%), Postives = 104/160 (65.00%), Query Frame = 1
Query:    1 TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSALGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINPLLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDFSALLSYMAGL 480
            TGGGFS YS    +  +Q   VN Y  + V  P S+ +NS+NR FPD+SALGHNY I    +   +DGTSCS+PV AGI +LLN Y ++  +    FINPLLYQ Y+D P+ + DI  GNN CTE  C + G+ +A G+DAVTGLGTP +   L+Y+  L
Sbjct:  436 TGGGFSNYS---PMPSYQQKAVNDYFNSGVKFPNSTFFNSSNRAFPDISALGHNYFILAAGADQVIDGTSCSSPVLAGIISLLNGYRISVGKPPLGFINPLLYQLYEDNPAAYNDIEKGNNYCTEHCCAETGFESAKGYDAVTGLGTPVYQEFLNYIQTL 592          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113039.2708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0ZSA3_DICPU1.930e-5056.25Peptidase S53 domain-containing protein n=1 Tax=Di... [more]
F4PRY0_CAVFA4.790e-4955.00Physaropepsin n=1 Tax=Cavenderia fasciculata (stra... [more]
Q54G77_DICDI6.230e-4955.63Peptidase S53 domain-containing protein n=1 Tax=Di... [more]
PHYSA_PHYPO4.640e-4853.13Physarolisin n=1 Tax=Physarum polycephalum TaxID=5... [more]
UPI000644F25B8.100e-4856.96hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3B6M3_POLPP8.170e-4755.63Physaropepsin n=1 Tax=Polysphondylium pallidum (st... [more]
UPI000644E8E98.170e-4755.00hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F0Z9R8_DICPU3.170e-4552.50Peptidase S53 domain-containing protein n=1 Tax=Di... [more]
A0A151Z8W0_9MYCE1.190e-4350.63Physaropepsin n=1 Tax=Tieghemostelium lacteum TaxI... [more]
A0A8J4Q2I7_9MYCE3.310e-4350.00Peptidase S53 domain-containing protein n=1 Tax=Po... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113039contigM-pyrifera_M_contig113039:2..487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.4
Seed ortholog evalue3.3e-43
Seed eggNOG ortholog5786.XP_003290302.1
KEGG koko:K01279,ko:K20756
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pro-kumamolisin, activation domain
EggNOG OGs2QR6D@2759,3XFXQ@554915,COG4934@1
EC3.4.14.9,3.4.21.103
COG Functional cat.O
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110,ko04147
Exons1
Model size486
Cds size486
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815644.1887991-CDS-M-pyrifera_M_contig113039:1..4871622815644.1887991-CDS-M-pyrifera_M_contig113039:1..487Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113039 2..487 +
1692277502.3850567-CDS-M-pyrifera_M_contig113039:1..4871692277502.3850567-CDS-M-pyrifera_M_contig113039:1..487Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113039 2..487 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113039.2708.1prot_M-pyrifera_M_contig113039.2708.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113039 2..487 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113039.2708.1

>prot_M-pyrifera_M_contig113039.2708.1 ID=prot_M-pyrifera_M_contig113039.2708.1|Name=mRNA_M-pyrifera_M_contig113039.2708.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
TGGGFSVYSNRAELAPWQDSVVNTYLQTAVGLPPSSDYNSNNRGFPDVSA
LGHNYLIRIDDSWADVDGTSCSAPVWAGINALLNSYELNNNRNLTAFINP
LLYQAYDDQPSIFYDIVDGNNTCTESKCCQYGYPTATGWDAVTGLGTPDF
SALLSYMAGLA*
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mRNA from alignment at M-pyrifera_M_contig113039:2..487+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113039.2708.1 ID=mRNA_M-pyrifera_M_contig113039.2708.1|Name=mRNA_M-pyrifera_M_contig113039.2708.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig113039:2..487+ (Macrocystis pyrifera P11B4 male)
ACCGGTGGAGGCTTCTCTGTGTACTCCAACCGTGCCGAGCTTGCCCCGTG GCAGGACAGCGTTGTCAACACCTACCTCCAGACTGCCGTTGGCCTGCCGC CGTCGAGCGACTACAACTCGAACAACCGTGGCTTCCCGGACGTGTCTGCT CTTGGTCACAACTACCTCATCCGCATCGACGACTCGTGGGCTGATGTTGA CGGCACCTCGTGCTCTGCACCTGTGTGGGCTGGCATCAACGCTCTGCTCA ACTCGTACGAGCTGAACAACAACCGCAACCTCACTGCCTTCATCAACCCC CTGCTTTACCAGGCGTACGACGACCAGCCTTCGATCTTCTACGACATCGT GGACGGCAACAACACCTGCACTGAGTCCAAGTGCTGCCAGTATGGCTACC CCACCGCCACTGGCTGGGATGCCGTCACCGGCCTTGGTACGCCCGACTTC AGCGCGCTCCTCAGCTACATGGCTGGCCTCGCGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113039:2..487+

>mRNA_M-pyrifera_M_contig113039.2708.1 ID=mRNA_M-pyrifera_M_contig113039.2708.1|Name=mRNA_M-pyrifera_M_contig113039.2708.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig113039:2..487+ (Macrocystis pyrifera P11B4 male)
ACCGGTGGAGGCTTCTCTGTGTACTCCAACCGTGCCGAGCTTGCCCCGTG
GCAGGACAGCGTTGTCAACACCTACCTCCAGACTGCCGTTGGCCTGCCGC
CGTCGAGCGACTACAACTCGAACAACCGTGGCTTCCCGGACGTGTCTGCT
CTTGGTCACAACTACCTCATCCGCATCGACGACTCGTGGGCTGATGTTGA
CGGCACCTCGTGCTCTGCACCTGTGTGGGCTGGCATCAACGCTCTGCTCA
ACTCGTACGAGCTGAACAACAACCGCAACCTCACTGCCTTCATCAACCCC
CTGCTTTACCAGGCGTACGACGACCAGCCTTCGATCTTCTACGACATCGT
GGACGGCAACAACACCTGCACTGAGTCCAAGTGCTGCCAGTATGGCTACC
CCACCGCCACTGGCTGGGATGCCGTCACCGGCCTTGGTACGCCCGACTTC
AGCGCGCTCCTCAGCTACATGGCTGGCCTCGCGTAAACCGGTGGAGGCTT
CTCTGTGTACTCCAACCGTGCCGAGCTTGCCCCGTGGCAGGACAGCGTTG
TCAACACCTACCTCCAGACTGCCGTTGGCCTGCCGCCGTCGAGCGACTAC
AACTCGAACAACCGTGGCTTCCCGGACGTGTCTGCTCTTGGTCACAACTA
CCTCATCCGCATCGACGACTCGTGGGCTGATGTTGACGGCACCTCGTGCT
CTGCACCTGTGTGGGCTGGCATCAACGCTCTGCTCAACTCGTACGAGCTG
AACAACAACCGCAACCTCACTGCCTTCATCAACCCCCTGCTTTACCAGGC
GTACGACGACCAGCCTTCGATCTTCTACGACATCGTGGACGGCAACAACA
CCTGCACTGAGTCCAAGTGCTGCCAGTATGGCTACCCCACCGCCACTGGC
TGGGATGCCGTCACCGGCCTTGGTACGCCCGACTTCAGCGCGCTCCTCAG
CTACATGGCTGGCCTCGCGTAA
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