mRNA_M-pyrifera_M_contig113038.2707.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: UPI000644EBBA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EBBA) HSP 1 Score: 164 bits (414), Expect = 2.810e-43 Identity = 88/193 (45.60%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSGS---KPVCTHAPRALSATAALGEIFELEE 570
++ + +++EQF +V +IS I + +L E+ FL S+KGL D H S++GTC+M+NG+IK RG + + VP LV G+L +ME IT + TMNGTL SLR+LA HHL+SV+ LL P PHS +++KS+Q+I KD NL I HL D++NN I E+ K V + AL+AT ++GEI +LEE
Sbjct: 976 IKESITTTDVNEQFTLVFEISGIISKMLVIEEIPTFLESSLKGLQDVHTFSTNGTCIMINGLIKNRGGELLDYVPMLVKGLLSSMEGITSDTTMNGTLVSLRSLATHHLISVLTVLLDFPMPHSTHVIKSLQIIAKDKNLVVPTITHLMDLLNNKPIYEDKPDPKDKKKTVPSPYLIALAATCSIGEILQLEE 1168
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: A0A151Z508_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z508_9MYCE) HSP 1 Score: 160 bits (405), Expect = 4.560e-42 Identity = 89/194 (45.88%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSG-SKPVCTHAPR--ALSATAALGEIFELEEM 573
+R + ++EQF +V IS I ++ E+ FL SIKGL D S++GTC+M+NG+IK RG+ + + VP LV G++ AM+ IT + TMNGTL SLR+LA HHLL VV LL P PH+ ++VKS+Q+I KD NL T+ ++HL D++NN I EE +K AP +L+AT++LGEI +L E+
Sbjct: 1040 IRESITTTEVNEQFSLVFDISMIIGRMISLDEIPRFLEGSIKGLTDLQTFSTNGTCIMINGLIKNRGQELLDYVPTLVKGLVAAMDGITSDTTMNGTLVSLRSLASHHLLPVVNVLLEYPMPHTLHVVKSLQIIAKDKNLVTETVNHLMDLLNNKPIYEEKPDPKNKNRTVPAPYIISLAATSSLGEILQLTEI 1233
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: MROH1_DICDI (Maestro heat-like repeat-containing protein family member 1 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=MROH1_DICDI) HSP 1 Score: 159 bits (403), Expect = 8.460e-42 Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENT---SGSKPVCTHAPRALSATAALGEIFELEEM 573
+R + ++EQF +V +IS I + ++ E+ FL SIKGL D S++G+C+++NG+IK RGE + E VP LV G+L AME IT E TMNGTL SLR+LA HHL+ V+ LL P PHS +++KS Q+I KD NL + + HL D++NN + EE + ++ + AL+AT +LGEIF+L E+
Sbjct: 1029 IRDSITTTEVNEQFSLVFEISVIISKMISLEEIPKFLEGSIKGLQDLQAFSTNGSCIIINGLIKTRGEELIEYVPILVKGLLTAMEGITSETTMNGTLVSLRSLANHHLIPVLSVLLEYPMPHSVHVIKSFQIIAKDKNLISPTLIHLMDLLNNKPVYEEKPDPKNKNRIIPQPFAIALAATCSLGEIFQLTEV 1222
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: A0A0L0DQA1_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DQA1_THETB) HSP 1 Score: 158 bits (400), Expect = 2.140e-41 Identity = 82/192 (42.71%), Postives = 124/192 (64.58%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILE-ENTSGSKPVCTHAPRALSATAALGEIFELEEM 573
L+ R+ + ++ QF +V++++ + +P EL L+ + GL DP SS++GTCV+LNG+++ RG + E + L+ ML AME+IT E+TMNGTLH+LRTL HHL VV+ELL +P P + +++KS+QV+ KD L +IDHL DI+NN E S K V + ++ATAA+ IF+ EE+
Sbjct: 1091 LKERIREDELNAQFAVVNELTRVLVKTVPETELPDLLMALMDGLVDPEESSANGTCVVLNGLMRSRGRELEEHIGQLIHAMLFAMENITTEQTMNGTLHALRTLGTHHLTGVVDELLTTPLPQTTHVIKSLQVLGKDVKLAMPMIDHLKDIMNNDMPYEVSQVSQKKFVKKVKSKPMAATAAIANIFDAEEL 1282
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: F0ZWH4_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZWH4_DICPU) HSP 1 Score: 157 bits (397), Expect = 5.420e-41 Identity = 86/194 (44.33%), Postives = 126/194 (64.95%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSGS---KPVCTHAPRALSATAALGEIFELEEM 573
+R + ++EQF +V +IS++ + ++ E+ FL SIKGL D S++G+C+M+NG+IK RGE + + VP LV G+L AME IT E TMNGTL SLR+LA HHL+ V+ LL P PHS +++KS+Q+I KD NL I HL D++NN + E+ + + + P AL+AT +LGEI +L E+
Sbjct: 1031 IREGITTTEVNEQFSLVFEISSVISKMVSLEEIPKFLEGSIKGLQDLQTFSTNGSCIMINGIIKSRGEELIDYVPVLVRGLLTAMEGITSETTMNGTLVSLRSLATHHLIPVLTVLLEYPMPHSIHVIKSLQIIGKDKNLIGPTIIHLMDLLNNKPVYEDKPDPKDKKRIIPSPFPVALAATCSLGEILQLSEI 1224
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: A0A8J4V3T7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V3T7_9MYCE) HSP 1 Score: 155 bits (391), Expect = 3.460e-40 Identity = 85/195 (43.59%), Postives = 126/195 (64.62%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLS-PTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSGS---KPVCTHAPRALSATAALGEIFELEEM 573
+R + ++EQF +V ++S I + ++ E+ FL S+KGL D S++G+C+M+NG+IK RG + + VP LV G+L +ME IT E TMNGTL SLR+LA HHLL V++ LL P PHS +++KS+Q+I KD NL +Q + +L D++NN + EE K V + AL+AT +LGEI +L E+
Sbjct: 1027 IRDGITTTEVNEQFSMVFEVSGIISKMISLEEIPKFLEGSLKGLQDLQAFSTNGSCIMINGLIKSRGAELLDYVPTLVKGLLTSMEGITSETTMNGTLVSLRSLATHHLLPVLDVLLNDFPMPHSTHVIKSLQIIAKDKNLVSQTLVYLMDLLNNKPVYEEKPDPKDKKKTVPSPFLVALAATCSLGEILQLAEV 1221
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: F4PQF3_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQF3_CAVFA) HSP 1 Score: 153 bits (386), Expect = 1.620e-39 Identity = 79/194 (40.72%), Postives = 126/194 (64.95%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSGS---KPVCTHAPRALSATAALGEIFELEEM 573
++ + +++EQF + +++++ A ++P EL FL S+KGL D S++GTC+++NG++K RG + + V LV G L AME IT + TMNGTL SLR+LA HHL++V+ +LL P PHS +++K++Q++ KD NL +HL D++NN I E+ K V + AL+ T++LGEI +LEE+
Sbjct: 935 IKETITTTDVNEQFQSLLEVASVIAKMMPLDELPKFLEQSLKGLQDLQTYSTNGTCIIINGLVKSRGGELFDHVGMLVKGFLAAMEGITSDTTMNGTLVSLRSLANHHLIAVLSQLLEFPMPHSVHVIKALQIVSKDKNLVVPTFNHLMDLLNNKPIYEDKPDPKDKKKTVPSQFNVALATTSSLGEILQLEEL 1128
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: L8GN71_ACACA (HEAT repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GN71_ACACA) HSP 1 Score: 144 bits (363), Expect = 1.990e-36 Identity = 73/191 (38.22%), Postives = 117/191 (61.26%), Query Frame = 1
Query: 1 LRGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSGSKPVCTHAPRALSATAALGEIFELEEM 573
LR ++ +++Q+ ++ +++ I A ++ EL L + GL D S+ GTCV+LNG+IK RGE + + VP ++ +++ M+ I+ ++T+N TLH++R LA+HH L V+ ELL P PH +VKS QVI KD L +++HL ++N + +E G T P LSATAALGE+ + +EM
Sbjct: 1022 LREQIASTEMNDQYKVMQELAGILAHMVAPEELPLLLKSILAGLTDSQLPSALGTCVVLNGLIKNRGEELKDRVPEVLGLLIEEMKKISVDQTLNATLHAVRNLALHHRLQVMNELLAVPVPHPSQVVKSFQVIAKDSTLVMDLVNHLLQLLNYGLLYDEKGQGKDKKYTARPLVLSATAALGEVMQTDEM 1212
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: UPI000644E2F7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E2F7) HSP 1 Score: 143 bits (361), Expect = 3.700e-36 Identity = 78/185 (42.16%), Postives = 119/185 (64.32%), Query Frame = 1
Query: 28 IHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVIVKDPNLGTQVIDHLTDIINNSQILEENTSGS---KPVCTHAPRALSATAALGEIFELEEM 573
++EQF + +IS I A +L E+ FL ++KGL D S++GTC++LNG+IK RG + + V LV G++ AME+IT + TMNGTL S+R+L+ HHL+ V+ LL P PHS +++KS+Q + KD NL I L D++NN I ++ + V + P AL+AT ++GEI ++EE+
Sbjct: 1041 VNEQFTLALEISNIIAKMLTLDEIPVFLEGTLKGLQDHQTLSTNGTCIILNGVIKARGGELGDYVTPLVKGLVSAMETITSDTTMNGTLASIRSLSNHHLIPVLGVLLEYPMPHSVHVIKSLQTLAKDKNLVVPTITFLMDLLNNKPIYDDKPDPKDKKRTVPSPYPIALAATCSIGEILQVEEL 1225
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Match: A0A2P6NHG7_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NHG7_9EUKA) HSP 1 Score: 141 bits (356), Expect = 1.730e-35 Identity = 83/206 (40.29%), Postives = 123/206 (59.71%), Query Frame = 1
Query: 4 RGRMEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGTCVMLNGMIKIRGEMVTEEVPNLVDGMLKAMESITDEKTMNGTLHSLRTLAVHHLLSVVEELLLSPTPHSQNIVKSIQVI--------------VKDPNLGTQVIDHLTDIINNSQILEENTSGSKPVCTHAPR--ALSATAALGEIFELEEM 573
R R++ ++EQF I H++S + L+ EL L + + GL D SS+SG CV+LNGMIK+RG + +VP +V G+ KAMESI+ ++TMNGTLH++++LA HHL V+++LL SP PH+ IVKS I +D +L IDHL D+++N Q+ E+ + PR +SAT AL EI +E++
Sbjct: 1030 RNRIDTEELNEQFSIAHEMSRELSKLVNRDELPQLLANLLVGLTDVETSSTSGACVVLNGMIKLRGGELLAKVPEIVAGITKAMESISSDQTMNGTLHTVQSLAHHHLQPVLDQLLTSPIPHATFIVKSFHAIGEYRFKCKMLTWNLARDDSLLGGTIDHLLDLMSNGQLYEDKSDVKGKEGLFNPRHIPMSATCALKEILLMEKV 1235 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113038.2707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113038.2707.1 >prot_M-pyrifera_M_contig113038.2707.1 ID=prot_M-pyrifera_M_contig113038.2707.1|Name=mRNA_M-pyrifera_M_contig113038.2707.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp MEDANIHEQFLIVHQISAISAVLLPAAELTPFLVHSIKGLNDPHPSSSSGback to top mRNA from alignment at M-pyrifera_M_contig113038:7..579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113038.2707.1 ID=mRNA_M-pyrifera_M_contig113038.2707.1|Name=mRNA_M-pyrifera_M_contig113038.2707.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig113038:7..579+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113038:7..579+ >mRNA_M-pyrifera_M_contig113038.2707.1 ID=mRNA_M-pyrifera_M_contig113038.2707.1|Name=mRNA_M-pyrifera_M_contig113038.2707.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig113038:7..579+ (Macrocystis pyrifera P11B4 male)back to top |