mRNA_M-pyrifera_M_contig112941.2691.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A517PL81_9PLAN (Cobalt-zinc-cadmium resistance protein CzcB n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PL81_9PLAN) HSP 1 Score: 354 bits (908), Expect = 2.030e-118 Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQS+IFS
Sbjct: 157 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSQIFS 349
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A517Q7M9_9PLAN (Cobalt-zinc-cadmium resistance protein CzcB n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q7M9_9PLAN) HSP 1 Score: 330 bits (847), Expect = 3.440e-109 Identity = 178/193 (92.23%), Postives = 186/193 (96.37%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+LYQ+RLQ EMAVVKDKIQQEIATNTR LL ALRKREPI EIEERFRSRSMG+YRERLLMAYA YLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEA+TRVAVAATSLRILGCDE EIQ+INPEQQGA ISHYF+R+PINGTIISKDVTLKEQIRPQS+IFS
Sbjct: 158 ELYQSRLQHEMAVVKDKIQQEIATNTRPLLVALRKREPITEIEERFRSRSMGNYRERLLMAYASYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEAATRVAVAATSLRILGCDEAEIQSINPEQQGAKISHYFIRSPINGTIISKDVTLKEQIRPQSQIFS 350
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A355G8U4_9PLAN (HlyD_D23 domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G8U4_9PLAN) HSP 1 Score: 303 bits (775), Expect = 2.470e-98 Identity = 161/193 (83.42%), Postives = 181/193 (93.78%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+LYQARLQ EMAVVKDKIQQEIATNT LLAALRKRE I EIEERFR+R MG+YRERLLMAYA YLK++ADV+RLEEPT+SGA+AFKQLHAAK+SRNADLAAFQARIEQI+YELKT+LLLSSQSVKEA+TRVAVAATSLRILGC+EQEI++INPEQQ ISHYFVRAPI+GT+ISKDVTLKEQ RP+++I S
Sbjct: 158 ELYQARLQHEMAVVKDKIQQEIATNTSLLLAALRKRESITEIEERFRNRGMGNYRERLLMAYASYLKTNADVDRLEEPTRSGAIAFKQLHAAKASRNADLAAFQARIEQIDYELKTALLLSSQSVKEAATRVAVAATSLRILGCEEQEIESINPEQQREKISHYFVRAPISGTVISKDVTLKEQARPETQILS 350
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A518KE55_9BACT (Cobalt-zinc-cadmium resistance protein CzcB n=2 Tax=Botrimarina mediterranea TaxID=2528022 RepID=A0A518KE55_9BACT) HSP 1 Score: 254 bits (650), Expect = 1.390e-79 Identity = 131/193 (67.88%), Postives = 167/193 (86.53%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+LYQAR Q EMAVVK +Q+ +A N R+LL ALR E I+ IE RFR+RSMGDYRERLL+AYAG+LKS+ADVERLE P +SGA++ KQL+AA+SS+++D A FQARIEQI+YEL+TSLL SSQ+VKEA+TRVAVA T+LRILGCDE++I +I+PEQQG +SHY +RAP +GT+++KDVTLKEQ+RP ++IFS
Sbjct: 156 ELYQARQQHEMAVVKQNLQEGVANNARELLNALRNGESIDAIEGRFRNRSMGDYRERLLLAYAGFLKSEADVERLEGPAQSGAISAKQLYAAQSSKSSDQATFQARIEQIDYELQTSLLSSSQAVKEAATRVAVATTNLRILGCDEEDIASIDPEQQGETVSHYSIRAPFDGTVVAKDVTLKEQVRPDTQIFS 348
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A142Y4B5_9BACT (Cobalt-zinc-cadmium resistance protein CzcB n=1 Tax=Pirellula sp. SH-Sr6A TaxID=1632865 RepID=A0A142Y4B5_9BACT) HSP 1 Score: 241 bits (616), Expect = 1.950e-74 Identity = 126/193 (65.28%), Postives = 162/193 (83.94%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+LYQARLQ E+A VK+ +Q+EI+ NT QLL ALR+R+PI +IE +FRSR MGDYRERLL+AY+ +LKS +DV+RLE T SGA++ KQL AA+SSRNADLA FQ+RIEQ+E+ELKTSLLL+SQ+ EA TRV+VA T+LRILGCDE++I +I+PE+QG IS Y +RAP +GT+ISKD LKEQ+RP S++ S
Sbjct: 162 ELYQARLQWEIAKVKENLQREISKNTEQLLTALRERKPIQDIESQFRSRGMGDYRERLLLAYSSFLKSQSDVQRLEGVTDSGAISAKQLVAAESSRNADLATFQSRIEQVEFELKTSLLLASQAAMEAGTRVSVATTNLRILGCDEEDIVSIDPERQGQTISDYPIRAPFDGTVISKDAALKEQVRPSSQMLS 354
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A5M6D485_9BACT (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6D485_9BACT) HSP 1 Score: 225 bits (574), Expect = 5.220e-68 Identity = 121/193 (62.69%), Postives = 156/193 (80.83%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+L+QARLQ EMA VKDK+Q+E++ NT +LL ALR++ I EI+E+ + +MG+YRERLL AYA YLKS ADV RLE + SGAV+ KQL AA++ RNA LA FQARIEQI YEL+TS L ++Q+VKEA+TRVAVA T+LRILGC+E EI++I+P +QG AISHY +RAP GT+I+KDVTL EQ+RP +I +
Sbjct: 179 ELFQARLQSEMAEVKDKLQRELSANTSELLTALREQRDITEIQEQHKDSNMGEYRERLLSAYADYLKSQADVNRLEGISTSGAVSGKQLLAARTRRNAGLATFQARIEQIAYELETSQLETAQAVKEANTRVAVATTNLRILGCEESEIKSIDPMRQGEAISHYSIRAPFRGTVIAKDVTLGEQVRPDKQILT 371
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A3L7RAC8_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RAC8_9BACT) HSP 1 Score: 219 bits (557), Expect = 1.120e-65 Identity = 116/193 (60.10%), Postives = 153/193 (79.27%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
DLYQARLQ+E+A+VK +Q IA NTR L+ LR PI +IE +FR MGDYRERLL +YAGYLK+ ADV RLE SGAV+ K L +A+S+R+ADLA FQAR+EQI+YE++TS+LL++Q+VKEA TRVAV ATSLRILG D ++I++++P QG AISHY +RAP +GT+I+KD T++EQ+RP + I +
Sbjct: 159 DLYQARLQREIAIVKRDLQTRIAENTRLLIDELRLGRPIQQIESKFRDLGMGDYRERLLASYAGYLKAQADVVRLENVQDSGAVSGKLLLSAQSTRDADLATFQARVEQIDYEMQTSILLANQNVKEAETRVAVDATSLRILGVDAKDIESVDPTDQGEAISHYPIRAPFDGTVITKDCTVREQVRPSASILT 351
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A255RD60_9BACT (Uncharacterized protein n=2 Tax=Rhodopirellula sp. MGV TaxID=2023130 RepID=A0A255RD60_9BACT) HSP 1 Score: 217 bits (553), Expect = 6.960e-65 Identity = 116/193 (60.10%), Postives = 156/193 (80.83%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+L+QARL+ E+A K K+QQE++ NT QLL ALR ++ I+EI+ + ++R+MG+YRERLL AYA YLK+ ADV RLE +SGAV+ KQL AA++ RNADLA FQARIEQI +EL++++L++SQ+VK A TRVAVA TSL+ILGC+E E+QTI+P QQG +ISHY +RAP GT+I+KDVTL EQIR ++ +
Sbjct: 180 ELFQARLELEIAEAKSKVQQELSGNTNQLLDALRNQKEISEIQSQLQNRNMGEYRERLLNAYADYLKAQADVVRLEGIAQSGAVSGKQLLAAQTRRNADLATFQARIEQIAFELQSAVLMTSQAVKSAKTRVAVAITSLKILGCNESEVQTIDPIQQGESISHYSIRAPFGGTVIAKDVTLGEQIRRDKQLLT 372
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: A0A354PAJ5_9PLAN (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354PAJ5_9PLAN) HSP 1 Score: 209 bits (533), Expect = 2.930e-62 Identity = 114/193 (59.07%), Postives = 149/193 (77.20%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+LYQAR+Q E+ ++ +QQ IA NT +LL+ALR+ E I EIE+RFR R MGDYRER L ++A YLKSDADV+RLE ++GAV+ KQL AA ++RNADLA FQARIEQI YEL+TS L+SSQ+VKEA +V VAATSL+IL +EI I+P QG +SHY +R+P++GTI++KDV L+EQ+RP + S
Sbjct: 144 ELYQARMQLELRNTQNDLQQTIAANTNELLSALRQGESIAEIEKRFRDRPMGDYRERALASFAAYLKSDADVQRLEGVAQTGAVSGKQLLAATTNRNADLATFQARIEQIHYELQTSTLMSSQAVKEAEAKVLVAATSLKILSVSAEEINKIDPAAQGERLSHYPLRSPLSGTILTKDVVLREQVRPDVMLMS 336
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Match: UPI001E395798 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Stieleria sp. JC731 TaxID=2894195 RepID=UPI001E395798) HSP 1 Score: 207 bits (528), Expect = 1.450e-61 Identity = 111/193 (57.51%), Postives = 154/193 (79.79%), Query Frame = 1
Query: 1 DLYQARLQQEMAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMAYAGYLKSDADVERLEEPTKSGAVAFKQLHAAKSSRNADLAAFQARIEQIEYELKTSLLLSSQSVKEASTRVAVAATSLRILGCDEQEIQTINPEQQGAAISHYFVRAPINGTIISKDVTLKEQIRPQSEIFS 579
+++QARL E+A + K+QQE++ NT +LL ALR ++ I EI+++ ++++MG+YRERLL AYA YLK+ ADV RLE +SGAV+ KQL AA++ RNADLA FQARIEQI +EL+++LL++SQ+VK A TRVAVA TSL+ILGC E E+Q I+P QQG +ISHY +RAP +GT+I+KDVTL EQ+R ++ +
Sbjct: 139 EVFQARLALEIAEAQYKVQQELSENTTKLLDALRSQKEITEIQKQSQNQNMGEYRERLLNAYADYLKAQADVSRLEGIAQSGAVSGKQLLAAQARRNADLATFQARIEQIAFELQSALLVTSQAVKSARTRVAVATTSLKILGCGEDEVQVIDPMQQGESISHYSIRAPFHGTVIAKDVTLGEQVRRDKQLLT 331 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112941.2691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112941.2691.1 >prot_M-pyrifera_M_contig112941.2691.1 ID=prot_M-pyrifera_M_contig112941.2691.1|Name=mRNA_M-pyrifera_M_contig112941.2691.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp MAVVKDKIQQEIATNTRQLLAALRKREPINEIEERFRSRSMGDYRERLLMback to top mRNA from alignment at M-pyrifera_M_contig112941:2..580- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112941.2691.1 ID=mRNA_M-pyrifera_M_contig112941.2691.1|Name=mRNA_M-pyrifera_M_contig112941.2691.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig112941:2..580- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112941:2..580- >mRNA_M-pyrifera_M_contig112941.2691.1 ID=mRNA_M-pyrifera_M_contig112941.2691.1|Name=mRNA_M-pyrifera_M_contig112941.2691.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig112941:2..580- (Macrocystis pyrifera P11B4 male)back to top |