mRNA_M-pyrifera_M_contig112882.2676.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112882.2676.1
Unique NamemRNA_M-pyrifera_M_contig112882.2676.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A8J4PLB5_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PLB5_9MYCE)

HSP 1 Score: 144 bits (363), Expect = 1.390e-37
Identity = 74/153 (48.37%), Postives = 101/153 (66.01%), Query Frame = 1 
Query:    1 KVYISS-WREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRLSIENA 456
            +VY+ S W  G   NPE   +  SE   L  EL  LP+NAA+RK N+LVKRARSAKVHA ++SHLR +MPS FG+ S+Q++L+DNL  EF K+Q    +PP DFP++ R+RE L+  D  K PK++ R +  LD  LS D P LL +  ++ +
Sbjct:  249 RVYLGSFWSGGPLQNPETESLLHSEMVDLMKELLVLPKNAAIRKVNDLVKRARSAKVHAIILSHLRNEMPSVFGKDSKQKELIDNLDKEFYKIQRMYNLPPSDFPDLQRYREQLKLYDFSKFPKINTRMLQTLDEVLSVDFPTLLQKFPLDGS 401
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A7S3F934_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F934_9VIRI)

HSP 1 Score: 135 bits (341), Expect = 2.250e-37
Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 1 
Query:    1 KVYISSW-REGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELL 432
            +VYI S+  +G   N +  R+F  E+  L  +L  +PR +  RK NE VKR R+AK+HAH+VSHL+A+MPS FG+  +Q+K++DNL +EF  VQ AT +P GDFPN+ RFR+ L   D  K  KL  + M  +D  L+ DIP LL
Sbjct:   47 RVYIGSFSHDGSMQNNDNERLFKKEQADLLKDLMDIPRRSIDRKVNEFVKRVRAAKIHAHLVSHLKAEMPSMFGKEKKQQKMLDNLHEEFNAVQRATHLPVGDFPNMERFRDVLSTYDFSKFKKLDTKLMAKIDEVLTNDIPALL 191
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A7S2SRY7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SRY7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 8.050e-37
Identity = 71/152 (46.71%), Postives = 106/152 (69.74%), Query Frame = 1 
Query:    1 KVYISS-WREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRLSIEN 453
            +VYI S W +    N E  R+F SE   L ++L  LPRN+A+RK NELVKRARSAKVHA ++ +LR +MPS+FG+ S+Q+++++NL  EF K+ A  ++P GDFP++ RF+  L   D+ K PKLS++ +  LD  LS DIP L+ ++ +++
Sbjct:  305 RVYIGSFWDKPMDQNHECIRLFESEAQDLISDLKSLPRNSAIRKVNELVKRARSAKVHALIIENLRTKMPSWFGKSSKQKEILENLPKEFEKIAAKCKLPRGDFPDIQRFKTLLSSFDLSKFPKLSQKAIQRLDTVLSADIPALMKQMHLQS 456
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A6A7G4N2_9CRUS (EH domain-containing protein 3 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G4N2_9CRUS)

HSP 1 Score: 136 bits (342), Expect = 1.610e-34
Identity = 72/147 (48.98%), Postives = 99/147 (67.35%), Query Frame = 1 
Query:    1 KVYISSWREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRL 441
            +VYI S+ +  + N E   +F +E++ L  +L  LPR++A+RK NELVKRAR AKVHA ++ HLR +   FFG+  +Q++L+ NL  EFRK+Q    +P GDFPN+ RF E LER DIHK  KL  R +  +D  LS DIPELL ++
Sbjct:  320 RVYIGSFWDQPYQNEENKALFEAEQNDLLADLRSLPRHSAVRKINELVKRARMAKVHALIIDHLRGEF-GFFGKAKKQKQLLTNLGAEFRKIQLEHSLPMGDFPNLARFTEILERYDIHKFKKLDPRVLQQMDDVLSRDIPELLKQI 465
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A1S8W766_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W766_9FUNG)

HSP 1 Score: 135 bits (339), Expect = 2.600e-34
Identity = 67/147 (45.58%), Postives = 98/147 (66.67%), Query Frame = 1 
Query:    1 KVYISSWREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRL 441
            +VYI S+ +    N E   +  +E+  L+N++  LPRNAA+RK NE+VKRAR  +VHA +VSHLR +MPSFFG+ S+Q +L+ NL  EF+K+Q    + PGDFPN  ++RE L    + K PKL K+ +  +  AL TD+P L+ ++
Sbjct:  262 RVYIGSFWDQPLHNNECEALLKAEQRDLFNDIKSLPRNAAIRKINEIVKRARLVQVHALIVSHLRHEMPSFFGKESKQNELLGNLSTEFQKIQRLHNLSPGDFPNPDKYRERLADFKLKKFPKLDKKSLQLIMDALGTDLPNLIRQI 408
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: D3BF55_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BF55_POLPP)

HSP 1 Score: 135 bits (339), Expect = 2.750e-34
Identity = 68/151 (45.03%), Postives = 101/151 (66.89%), Query Frame = 1 
Query:    1 KVYISS-WREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRLSIE 450
            +VY+ S W   G  NP+  ++  SE   L  EL  LP+N+A+RK N+LVKRARSAKVHA ++ HLR +MP+ FG+ S+Q++L+ NL  EF+K++    +P GDFP+V ++R  L+  D  K PKL+ + +D LD  L+ D P+LL R  ++
Sbjct:  249 RVYLGSFWNGTGLQNPDTEKLLHSEMVDLIKELLMLPKNSAIRKVNDLVKRARSAKVHALIIGHLRNEMPNVFGKDSKQQELIKNLDKEFQKIERMYNIPAGDFPDVEKYRNILKVHDFSKFPKLNPKMLDVLDEVLAVDFPQLLQRFPLD 399
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A0L0D9J8_THETB (EH domain-containing protein 3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9J8_THETB)

HSP 1 Score: 134 bits (337), Expect = 4.280e-34
Identity = 67/155 (43.23%), Postives = 103/155 (66.45%), Query Frame = 1 
Query:    1 KVYISSWREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRLS-IENAAG 462
            +VYI S+ +    N E   +F +E   L  +L  LPRNAA+RK NELVKRAR  KVHA ++SHLR +MPS FG+G +Q+ L+D +L+ F+ V    Q+PPGDFP++ RF+      + +K PKL+   +++++  L+ DIP+LL  ++ +++ AG
Sbjct:  251 RVYIGSFWDQPLHNSENQALFEAEEQDLMADLRYLPRNAAVRKINELVKRARLVKVHALLISHLRGEMPSMFGKGKKQKALLDGMLEVFKTVMRQHQLPPGDFPDLERFKARAAEYEFNKFPKLNMSMIESMNSVLAADIPQLLELIAPVDDGAG 405
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: F4PZF1_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PZF1_CAVFA)

HSP 1 Score: 132 bits (333), Expect = 1.990e-33
Identity = 69/153 (45.10%), Postives = 101/153 (66.01%), Query Frame = 1 
Query:    1 KVYISS-WREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRLSIENA 456
            +VY+ S W   G  NP+  ++  +E   L  EL  LP+NAA+RK N+LVKRAR+ KVHA +VSHLR++MP+ FGR S+Q +L+ NL  EF K++    +P GDFP+V ++R  L+  D  K PKL+ + ++ LD  L+ D P+LL R  I+ +
Sbjct:  249 RVYLGSFWNGTGLQNPDTEKLLHAEMVDLIKELLMLPKNAAIRKVNDLVKRARTTKVHALIVSHLRSEMPAVFGRDSKQAELIKNLDKEFNKMERIYGIPSGDFPDVEKYRSILKVQDFSKFPKLNPKMIEQLDEVLAVDFPKLLQRFPIDGS 401
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BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: A0A540LIV7_MALBA (Dynamin-type G domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540LIV7_MALBA)

HSP 1 Score: 128 bits (322), Expect = 2.460e-33
Identity = 66/150 (44.00%), Postives = 95/150 (63.33%), Query Frame = 1 
Query:    1 KVYISSWREG----GFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHR 438
            +VYI S+ +       + P    +F  E++ L  +L  +P+ A  R+ NE VKRAR+AK+HA+++SHLR +MP+  G+   QRKL+DNL DEF+KVQ    +PPGDFPNV  +R+ L      KL +L  + +DA+D  L  DIPELL +
Sbjct:  158 RVYIGSFNDKPVNEAATGPVGKELFEREQEDLLADLKDIPKKACDRRINEFVKRARAAKIHAYIISHLRKEMPAMLGKSKAQRKLIDNLEDEFKKVQREHHLPPGDFPNVDHYRDILTGYSFDKLERLKPKMIDAVDEMLGYDIPELLKK 307
[Close]
BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Match: F4PEQ6_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PEQ6_BATDJ)

HSP 1 Score: 132 bits (331), Expect = 2.570e-33
Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = 1 
Query:    1 KVYISSWREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKRARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPPGDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRL 441
            +VYI S+ +    N +   +  +E+  L+N++  LPRNA +RK NE+VKRAR  +VHA +VSHLR +MPSFFG+ ++Q  L+ NL  EF+K+Q   Q+ PGDFPN  R+RE L    + K PKL K+ M  +  AL  D+P L+ ++
Sbjct:  228 RVYIGSFWDQPMQNRDCELLLKAEQKDLFNDIKCLPRNATIRKINEIVKRARMVQVHALIVSHLREEMPSFFGKETKQNDLLKNLGIEFQKIQRLHQLSPGDFPNPDRYRERLAEFKLKKFPKLDKKSMQLIMDALGNDLPNLMRQI 374
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112882.2676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4PLB5_9MYCE1.390e-3748.37Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A7S3F934_9VIRI2.250e-3747.59Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A7S2SRY7_9STRA8.050e-3746.71Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A6A7G4N2_9CRUS1.610e-3448.98EH domain-containing protein 3 (Fragment) n=2 Tax=... [more]
A0A1S8W766_9FUNG2.600e-3445.58Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
D3BF55_POLPP2.750e-3445.03Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A0L0D9J8_THETB4.280e-3443.23EH domain-containing protein 3 n=1 Tax=Thecamonas ... [more]
F4PZF1_CAVFA1.990e-3345.10Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
A0A540LIV7_MALBA2.460e-3344.00Dynamin-type G domain-containing protein n=1 Tax=M... [more]
F4PEQ6_BATDJ2.570e-3344.90Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112882contigM-pyrifera_M_contig112882:116..577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue3.1e-30
Seed eggNOG ortholog529818.AMSG_05001T0
Preferred nameEHD4
KEGG koko:K12469,ko:K12476,ko:K12477,ko:K12483
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001881,GO:0001932,GO:0001934,GO:0002009,GO:0002165,GO:0003002,GO:0003006,GO:0003407,GO:0003674,GO:0003676,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005769,GO:0005783,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005901,GO:0005911,GO:0005929,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0006897,GO:0006907,GO:0006937,GO:0006942,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007009,GO:0007010,GO:0007034,GO:0007041,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007292,GO:0007349,GO:0007389,GO:0007399,GO:0007423,GO:0007444,GO:0007472,GO:0007474,GO:0007476,GO:0007552,GO:0007560,GO:0007596,GO:0007599,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008587,GO:0009506,GO:0009611,GO:0009628,GO:0009651,GO:0009653,GO:0009719,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010008,GO:0010033,GO:0010256,GO:0010562,GO:0010604,GO:0010720,GO:0010830,GO:0010831,GO:0010883,GO:0010884,GO:0010885,GO:0010886,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0010959,GO:0010975,GO:0010976,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016462,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017111,GO:0017137,GO:0019220,GO:0019222,GO:0019898,GO:0019899,GO:0019904,GO:0019953,GO:0020016,GO:0020018,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0022898,GO:0023051,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030054,GO:0030100,GO:0030139,GO:0030154,GO:0030182,GO:0030424,GO:0030865,GO:0030866,GO:0031090,GO:0031094,GO:0031095,GO:0031175,GO:0031253,GO:0031267,GO:0031323,GO:0031325,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031410,GO:0031901,GO:0031982,GO:0032268,GO:0032270,GO:0032386,GO:0032388,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0033036,GO:0033043,GO:0033267,GO:0033365,GO:0034381,GO:0034383,GO:0034498,GO:0034613,GO:0034622,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0042060,GO:0042147,GO:0042221,GO:0042325,GO:0042327,GO:0042391,GO:0042538,GO:0042592,GO:0042632,GO:0042670,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043010,GO:0043112,GO:0043170,GO:0043195,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043270,GO:0043679,GO:0043933,GO:0044057,GO:0044085,GO:0044093,GO:0044237,GO:0044260,GO:0044306,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044441,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0044853,GO:0045121,GO:0045171,GO:0045184,GO:0045202,GO:0045466,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045937,GO:0046530,GO:0046907,GO:0048052,GO:0048193,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048563,GO:0048569,GO:0048592,GO:0048593,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0048878,GO:0050730,GO:0050731,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051493,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051924,GO:0051928,GO:0051960,GO:0051962,GO:0055037,GO:0055038,GO:0055044,GO:0055088,GO:0055092,GO:0055117,GO:0060041,GO:0060042,GO:0060142,GO:0060143,GO:0060170,GO:0060219,GO:0060255,GO:0060271,GO:0060284,GO:0060341,GO:0060429,GO:0060562,GO:0060627,GO:0060988,GO:0060990,GO:0061024,GO:0061174,GO:0061512,GO:0065003,GO:0065005,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0071212,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071825,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0080090,GO:0086036,GO:0090160,GO:0090257,GO:0090596,GO:0097006,GO:0097159,GO:0097320,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098657,GO:0098793,GO:0098805,GO:0098857,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0150034,GO:1901019,GO:1901021,GO:1901363,GO:1901385,GO:1901387,GO:1901739,GO:1901741,GO:1903169,GO:1903358,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1904950,GO:1905952,GO:1905954,GO:1990089,GO:1990090,GO:1990255,GO:1990778,GO:2000026,GO:2001135,GO:2001137,GO:2001257,GO:2001259
EggNOG free text desc.endocytic recycling
EggNOG OGsKOG1954@1,KOG1954@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Exons1
Model size462
Cds size462
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815642.2572103-CDS-M-pyrifera_M_contig112882:115..5771622815642.2572103-CDS-M-pyrifera_M_contig112882:115..577Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112882 116..577 -
1692277501.319371-CDS-M-pyrifera_M_contig112882:115..5771692277501.319371-CDS-M-pyrifera_M_contig112882:115..577Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112882 116..577 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112882.2676.1prot_M-pyrifera_M_contig112882.2676.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112882 116..577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112882.2676.1

>prot_M-pyrifera_M_contig112882.2676.1 ID=prot_M-pyrifera_M_contig112882.2676.1|Name=mRNA_M-pyrifera_M_contig112882.2676.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
KVYISSWREGGFSNPEFARIFASERDALWNELSGLPRNAAMRKANELVKR
ARSAKVHAHVVSHLRAQMPSFFGRGSRQRKLMDNLLDEFRKVQAATQMPP
GDFPNVHRFREHLERVDIHKLPKLSKRKMDALDVALSTDIPELLHRLSIE
NAAG
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mRNA from alignment at M-pyrifera_M_contig112882:116..577-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112882.2676.1 ID=mRNA_M-pyrifera_M_contig112882.2676.1|Name=mRNA_M-pyrifera_M_contig112882.2676.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig112882:116..577- (Macrocystis pyrifera P11B4 male)
AAGGTCTACATCTCCTCCTGGCGCGAGGGCGGCTTCTCCAACCCAGAGTT
TGCCCGCATCTTTGCTTCTGAGCGCGACGCGCTGTGGAACGAGCTCAGCG
GCTTGCCGCGCAACGCAGCGATGCGCAAGGCGAACGAGCTGGTGAAGCGC
GCCCGCTCCGCCAAGGTGCACGCGCACGTCGTCTCCCACCTGCGTGCCCA
GATGCCCTCCTTCTTCGGCCGCGGCTCCCGCCAGCGCAAGCTCATGGACA
ACCTGCTGGACGAGTTCCGCAAGGTGCAGGCCGCGACGCAGATGCCTCCC
GGCGACTTCCCCAACGTGCACCGCTTCCGCGAGCACCTCGAGCGCGTCGA
CATCCACAAGCTGCCCAAGCTCTCCAAGCGCAAGATGGACGCGCTTGATG
TTGCGCTCTCTACCGACATCCCGGAGCTGCTCCACCGGCTCAGCATCGAG
AACGCCGCCGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig112882:116..577-

>mRNA_M-pyrifera_M_contig112882.2676.1 ID=mRNA_M-pyrifera_M_contig112882.2676.1|Name=mRNA_M-pyrifera_M_contig112882.2676.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig112882:116..577- (Macrocystis pyrifera P11B4 male)
AAGGTCTACATCTCCTCCTGGCGCGAGGGCGGCTTCTCCAACCCAGAGTT
TGCCCGCATCTTTGCTTCTGAGCGCGACGCGCTGTGGAACGAGCTCAGCG
GCTTGCCGCGCAACGCAGCGATGCGCAAGGCGAACGAGCTGGTGAAGCGC
GCCCGCTCCGCCAAGGTGCACGCGCACGTCGTCTCCCACCTGCGTGCCCA
GATGCCCTCCTTCTTCGGCCGCGGCTCCCGCCAGCGCAAGCTCATGGACA
ACCTGCTGGACGAGTTCCGCAAGGTGCAGGCCGCGACGCAGATGCCTCCC
GGCGACTTCCCCAACGTGCACCGCTTCCGCGAGCACCTCGAGCGCGTCGA
CATCCACAAGCTGCCCAAGCTCTCCAAGCGCAAGATGGACGCGCTTGATG
TTGCGCTCTCTACCGACATCCCGGAGCTGCTCCACCGGCTCAGCATCGAG
AACGCCGCCGGAAAGGTCTACATCTCCTCCTGGCGCGAGGGCGGCTTCTC
CAACCCAGAGTTTGCCCGCATCTTTGCTTCTGAGCGCGACGCGCTGTGGA
ACGAGCTCAGCGGCTTGCCGCGCAACGCAGCGATGCGCAAGGCGAACGAG
CTGGTGAAGCGCGCCCGCTCCGCCAAGGTGCACGCGCACGTCGTCTCCCA
CCTGCGTGCCCAGATGCCCTCCTTCTTCGGCCGCGGCTCCCGCCAGCGCA
AGCTCATGGACAACCTGCTGGACGAGTTCCGCAAGGTGCAGGCCGCGACG
CAGATGCCTCCCGGCGACTTCCCCAACGTGCACCGCTTCCGCGAGCACCT
CGAGCGCGTCGACATCCACAAGCTGCCCAAGCTCTCCAAGCGCAAGATGG
ACGCGCTTGATGTTGCGCTCTCTACCGACATCCCGGAGCTGCTCCACCGG
CTCAGCATCGAGAACGCCGCCGGA
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