mRNA_M-pyrifera_M_contig112756.2654.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A3C0HRA8_9ACTN (Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HRA8_9ACTN) HSP 1 Score: 371 bits (952), Expect = 3.070e-127 Identity = 172/193 (89.12%), Postives = 182/193 (94.30%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R++VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRMAG EVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPY+PDFTAP+DAGD KAVGKRPT+++SRPNFIELC QL EDEK FE LFRRLGLSVDWTRTYETINDHCRRISQL FL NL G+AYQ+EAPSLWDVTFQTAVAQAELEDKEMPGAYHKL
Sbjct: 37 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGSEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYNPDFTAPNDAGDPKAVGKRPTIAVSRPNFIELCVQLTVEDEKAFEGLFRRLGLSVDWTRTYETINDHCRRISQLAFLDNLNAGQAYQIEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 229
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A2D8LWN9_9ACTN (Valine--tRNA ligase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LWN9_9ACTN) HSP 1 Score: 375 bits (962), Expect = 1.910e-122 Identity = 174/193 (90.16%), Postives = 182/193 (94.30%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R++VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRMAG EVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGD KAVGKRPT+++SRPNFIELC QL EDEK FE LFRRLGLSVDWTRTYETINDHCRRISQL FL NL G+AYQ+EAPSLWDVTFQTAVAQAELEDKEMPGAYHKL
Sbjct: 37 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGSEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDPKAVGKRPTIAVSRPNFIELCVQLTVEDEKAFEGLFRRLGLSVDWTRTYETINDHCRRISQLAFLDNLNAGQAYQIEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 229
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A7K1Z958_9ACTN (Valine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z958_9ACTN) HSP 1 Score: 347 bits (891), Expect = 8.700e-112 Identity = 164/193 (84.97%), Postives = 175/193 (90.67%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R++VFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAG+EVFYPMGWDDNGLPTERRVQNY+GV CDPSLPYD DF+ P DAG+ K V KR +SISRPNFI+LC +L EDEKVFE LFR LGLSVDWTRTY TINDHCRR+SQL FL NL RGEAYQVEAPSLWDVTFQTAVAQAELEDKE+PGAYHKL
Sbjct: 37 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGREVFYPMGWDDNGLPTERRVQNYYGVVCDPSLPYDGDFSVPADAGNPKEVSKRRPISISRPNFIDLCLELTGEDEKVFEQLFRHLGLSVDWTRTYTTINDHCRRVSQLAFLDNLARGEAYQVEAPSLWDVTFQTAVAQAELEDKEVPGAYHKL 229
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A3M2FWS9_ACTSX (Valine--tRNA ligase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FWS9_ACTSX) HSP 1 Score: 347 bits (890), Expect = 9.060e-112 Identity = 159/193 (82.38%), Postives = 176/193 (91.19%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R+++F+IDTPPPTVSGSLHVGHVFSYTHTDTVARYQRM G+EVFYPMGWDDNGLPTERRVQNY+GVRCDPSLPYDPDFT P DAG+ KA+ KR ++ISRPNFIELC +L EDEK FE LFR+LGLSVDWTRTY TI+DHCRR+SQL F NL+RGEAYQVEAPSLWDVTFQTAVAQAELED+E+PGAYH L
Sbjct: 37 RDEIFAIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMRGREVFYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDPDFTPPADAGNPKAIAKREVIAISRPNFIELCHRLTAEDEKAFEGLFRKLGLSVDWTRTYATIDDHCRRVSQLAFCENLQRGEAYQVEAPSLWDVTFQTAVAQAELEDRELPGAYHTL 229
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A2D9PT51_9ACTN (Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D9PT51_9ACTN) HSP 1 Score: 325 bits (833), Expect = 1.420e-109 Identity = 152/193 (78.76%), Postives = 172/193 (89.12%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R +VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRM+G+EVFYPMGWDDNGLPTERRVQNYFGVRC+PSL YDPDFTAP+DAGD KA+ +R V+ISR NFI+LC L EDE+ FEALFRRLGLSVDWT+ Y TI++ C+R+SQ GFL NL RGEAYQ+EAP+LWDVT +TAVAQAELED+E PGAYH L
Sbjct: 46 RAEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMSGREVFYPMGWDDNGLPTERRVQNYFGVRCEPSLTYDPDFTAPEDAGDPKAMKERGDVAISRRNFIDLCHVLTAEDEQAFEALFRRLGLSVDWTQHYTTIDERCQRVSQRGFLRNLARGEAYQIEAPTLWDVTHRTAVAQAELEDRERPGAYHTL 238
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A382BCV1_9ZZZZ (Valine--tRNA ligase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382BCV1_9ZZZZ) HSP 1 Score: 323 bits (828), Expect = 8.140e-109 Identity = 151/193 (78.24%), Postives = 167/193 (86.53%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R +VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRMAG+EVFYPMGWDDNGLPTERRVQNYFGVRC+PSLPYDPDF APDDAGD A+ KR + ISR NFI+LC L EDE+ FE LFRRLGLSVDWT+ Y TI++ C+R SQ FL NL RGEAYQ+EAPSLWDVT +TAVAQAELED++ PGAYH L
Sbjct: 46 RSEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGREVFYPMGWDDNGLPTERRVQNYFGVRCEPSLPYDPDFAAPDDAGDPTAIKKRGEIDISRRNFIDLCHVLTAEDEQAFETLFRRLGLSVDWTQHYATIDERCQRTSQRAFLRNLARGEAYQIEAPSLWDVTHRTAVAQAELEDRDRPGAYHTL 238
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A6N9EPZ2_9ACTN (Valine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EPZ2_9ACTN) HSP 1 Score: 337 bits (863), Expect = 1.640e-107 Identity = 154/193 (79.79%), Postives = 173/193 (89.64%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R +VFSIDTPPPTVSGSLHVGHVFSYTHTD +AR++RMAG+ VFYPMGWDDNGLPTERRVQNY+GVRCDPSLPYDPDF AP DAG AV KR T+++SRPNFI+LC +L DE+ FE LFRR+GLSVDWTRTY TI+ HCRR+SQL FL NLERGEAYQ+EAPSLWDVTFQTAVAQAEL+D+E+PGAYHKL
Sbjct: 45 RSEVFSIDTPPPTVSGSLHVGHVFSYTHTDIIARHRRMAGQAVFYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDPDFAAPPDAGRPSAVAKRRTIAVSRPNFIDLCEELTASDERAFEDLFRRIGLSVDWTRTYATIDTHCRRVSQLAFLENLERGEAYQIEAPSLWDVTFQTAVAQAELDDREVPGAYHKL 237
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A2E6XGI6_9CHLR (Valine--tRNA ligase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E6XGI6_9CHLR) HSP 1 Score: 334 bits (857), Expect = 1.240e-106 Identity = 157/193 (81.35%), Postives = 173/193 (89.64%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R++VFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNY+GVRCDPSLPYDPDF AP DAGD KA+ KR + ISR NFI LC +L EDEK FEAL+R LGLS+DWT+TY TI+D C+R++Q FL NLERGEAYQVEAPSLWDVTF+TAVAQAELED+E PGAYH+L
Sbjct: 44 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDPDFEAPADAGDPKAIKKRGDLDISRRNFIALCHELTLEDEKAFEALWRHLGLSIDWTQTYATIDDRCQRVAQRAFLRNLERGEAYQVEAPSLWDVTFRTAVAQAELEDRERPGAYHQL 236
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A3D5GIN1_9ACTN (Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5GIN1_9ACTN) HSP 1 Score: 323 bits (829), Expect = 2.340e-105 Identity = 151/193 (78.24%), Postives = 169/193 (87.56%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R VFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAG+EVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPY+P+F P DAGD KA+ KR V +SRPNF+ELC L EDEK FE+LFRRLGLSVDWT+ Y TI++ C+++SQ FL NL RGEAYQ+EAPSLWDVT +TAVAQAELED+E PGAY++L
Sbjct: 43 RVDVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGREVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYEPEFAPPADAGDQKAIKKRGEVRVSRPNFVELCHVLTAEDEKAFESLFRRLGLSVDWTQHYATIDERCQQVSQRAFLRNLARGEAYQIEAPSLWDVTHRTAVAQAELEDRERPGAYYRL 235
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A800IBD6_9ACTN (Valine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBD6_9ACTN) HSP 1 Score: 328 bits (842), Expect = 1.590e-104 Identity = 153/193 (79.27%), Postives = 171/193 (88.60%), Query Frame = 1
Query: 1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 579
R QVFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRM GKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDP+FT P+DAGDAK + KR ISR NF+ELC L +EDEKVFE+L+R+LGLS+DW TY TI+D C+R++Q FL NLERGEAYQ+EAPSLWDVTF+TAVAQAELED+ PGAYH+L
Sbjct: 45 RAQVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMQGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPNFTPPEDAGDAKVIKKRRDHDISRRNFVELCHLLTQEDEKVFESLWRQLGLSIDWNLTYATIDDRCQRMAQRAFLRNLERGEAYQIEAPSLWDVTFRTAVAQAELEDRPRPGAYHQL 237 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112756.2654.1 >prot_M-pyrifera_M_contig112756.2654.1 ID=prot_M-pyrifera_M_contig112756.2654.1|Name=mRNA_M-pyrifera_M_contig112756.2654.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDback to top mRNA from alignment at M-pyrifera_M_contig112756:3..581- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112756.2654.1 ID=mRNA_M-pyrifera_M_contig112756.2654.1|Name=mRNA_M-pyrifera_M_contig112756.2654.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig112756:3..581- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112756:3..581- >mRNA_M-pyrifera_M_contig112756.2654.1 ID=mRNA_M-pyrifera_M_contig112756.2654.1|Name=mRNA_M-pyrifera_M_contig112756.2654.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig112756:3..581- (Macrocystis pyrifera P11B4 male)back to top |