mRNA_M-pyrifera_M_contig112749.2650.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A518BMN4_9BACT (FG-GAP repeat protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BMN4_9BACT) HSP 1 Score: 61.2 bits (147), Expect = 2.610e-8 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 7 LTLATLDMDGDGDDDVVLGENTDPGQQDRVVA-FENDGFGGFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVAQLNANAL---VLLHGSVDGLM-DITTTSFGGSLTGSVWTDLDGDG 348
L+ D+DGDG +DV+ GE G+ VA F + G F LP + P++ES GD+DGDG ED++V L+ +L + L G DG+M D GG ++ TDLD DG
Sbjct: 238 LSSLVFDVDGDGLNDVLGGEQAYDGEGPGSVAVFLQNADGSFADPTWDLPAPRIPLLESAGDVDGDGTEDIAVFDLSGESLSVQLYLRGD-DGVMADYGELFVGGRVSTFEVTDLDLDG 355
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A137RIC2_9FLAO (Por_Secre_tail domain-containing protein n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A137RIC2_9FLAO) HSP 1 Score: 58.5 bits (140), Expect = 2.280e-7 Identity = 44/126 (34.92%), Postives = 60/126 (47.62%), Query Frame = 1
Query: 4 PLTLATLDMDGDGDDDVVLGENTDPGQQDRVVAFEN-DGFGGFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVAQLNANALVLLHGSVDGLMDITTTSFGGSLTGSVWT----DLDGDGILDVAA 366
P T+ ++DMDGDGD DV+ N D D++ EN DG G F + L PI DIDGDG D+ V+Q N V ++DG T L S + D+D DG +D+ +
Sbjct: 394 PYTVMSIDMDGDGDKDVICASNGD----DKISWLENMDGIGNFSSPKTISLQLNYPISIDAADIDGDGDMDV-VSQSYYNNTVAWFENMDGQGTSFTAHIFSPLISSPYVTYPMDVDNDGDIDIVS 514
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: UPI0015BAFF7C (T9SS type A sorting domain-containing protein n=2 Tax=Winogradskyella forsetii TaxID=2686077 RepID=UPI0015BAFF7C) HSP 1 Score: 56.6 bits (135), Expect = 1.100e-6 Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 22 LDMDGDGDDDVVLGENTDPGQQDRVVAFEND-GFGGFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVAQLNANALVLLHGSVDGL----MDITTTSFGGSLTGSVWTDLDGDGILDVAAARVHDQAI 390
+D+DGDGD DVV N D G + V +EN+ G G F ++ S GD+DGDG D++ A + N +V + DGL ++ + S+T D DGDG LDV AA ++D I
Sbjct: 195 VDVDGDGDLDVVSAWNIDGGTK-GVSWYENETGSGLFSSRKIIALTTNSISSVHAGDLDGDGDIDVAAAIQSENKVVWYE-NTDGLGTFSVENVLSDTAESVTKVNIADFDGDGKLDVIAASINDNEI 320
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A3D1E5Y7_9FLAO (UnbV_ASPIC domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A3D1E5Y7_9FLAO) HSP 1 Score: 56.2 bits (134), Expect = 1.490e-6 Identity = 52/137 (37.96%), Postives = 66/137 (48.18%), Query Frame = 1
Query: 13 LATLDMDGDGDDDVVLGEN----TDPGQQDRVVAFENDGFGGFMPAVLVLPGLQSPIVES----QGDIDGDGFEDLSVAQLNANALVLLHGS-----VDG---LMDITTT-----SFGGSLTGSVWTDLDGDGILDV 360
+A LD+DGDGD DV G+ + + + NDG G F + VLP QS + GDIDGDG DL V + N + GS DG +D T T S G +T + WTDLDGDG LD+
Sbjct: 694 VALLDVDGDGDLDVYFGQGGVEFSSFSSELADQLYLNDGRGSFALSKSVLP-TQSVYFNTGTVRAGDIDGDGKTDLFVGERCINGAYGVPGSGHLLFSDGKGHFVDKTDTWAPELSQLGMITDAAWTDLDGDGDLDL 829
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A1M7E954_9BACT (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Hymenobacter psychrotolerans TaxID=344998 RepID=A0A1M7E954_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 1.930e-6 Identity = 40/132 (30.30%), Postives = 63/132 (47.73%), Query Frame = 1
Query: 25 DMDGDGDDDVVLGENTDPGQQD-RVVAFENDGFG-GFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVAQLNANALVLLHGSVDG------LMDITTTSFGGSLTGSVWTDLDGDGILDVAAARVHDQAIGV 396
D+DGDGD D+++ N DPG R+ +N G + +Q+P+ + GDIDGDG DL + + L+G + + TT + G S+ V +D DGDG LD+ A + + +
Sbjct: 161 DVDGDGDLDMLIANNVDPGTVSVRLNGGDNTASNTGVFSGGTEVDVIQTPLNITLGDIDGDGDLDLVTGHTDGLITIRLNGGNNSGSNTGTFIGGTTLTIGSSVAAPVLSDADGDGDLDLLCADGVNNRVAI 292
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A1H1SF30_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Formosa sp. Hel1_31_208 TaxID=1798225 RepID=A0A1H1SF30_9FLAO) HSP 1 Score: 55.5 bits (132), Expect = 2.530e-6 Identity = 41/143 (28.67%), Postives = 65/143 (45.45%), Query Frame = 1
Query: 4 PLTLATLDMDGDGDDDVVLGENTDPGQQDRVVAFENDGFGGFMPAVLVLPGLQSPIVESQ---------GDIDGDGFEDLSVAQLNANALVLLHGSVDG-------LMDITTTSFGGSLTGSVWTDLDGDGILDVAAARVHDQ 384
P +A+ D+DGDGD D+V+ G QD + ++NDGFG F + L +P+V S D+DG +D+ V + + LV G ++D T + G + G D++ DG +D+A D
Sbjct: 37 PYEIASGDLDGDGDIDIVMATYNAAGTQDNIKWYKNDGFGNFKFEPVDLTDPFNPLVSSTITWIDGLTVADVDGQFGDDIIVTSVLDDKLVYFPALASGEGFGNEVVIDGTLAAPGEVIAG----DINNDGHIDIATVVYTDN 175
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A2T2TVX6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium QS_1_65_9 TaxID=1919104 RepID=A0A2T2TVX6_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 3.150e-6 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 4 PLTLATLDMDGDGDDDVVLGENTDPGQQDRVVAFENDGFGGFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVAQLNANA 243
P T+D+DGDGD DVV+ D ++V +ENDG G F P + + P+ GD++GDG D+ VA+ + +A
Sbjct: 37 PTAQDTVDVDGDGDRDVVVASRGDG----KIVWYENDGAGDFTPHTIATD-VGDPVSIDSGDLNGDGTPDILVAESSLDA 111
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A2D4XK75_9FLAO (Por_Secre_tail domain-containing protein n=1 Tax=Aequorivita sp. TaxID=1872390 RepID=A0A2D4XK75_9FLAO) HSP 1 Score: 54.3 bits (129), Expect = 6.850e-6 Identity = 44/136 (32.35%), Postives = 64/136 (47.06%), Query Frame = 1
Query: 7 LTLATLDMDGDGDDDVVLGENTDPGQQDRVVAFEN-DGFGGFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVAQLNANALVLLHGSVDGLMDI-------TTTSFGGSLTGSVWTDLDGDGILDVAAARVHDQAI 390
L+L +D+DGDGD D+V + G ++V EN DG G F L+ P D+DGDG D+ A L + ++ + + DGL T + S+ S DLDGDG +DV +A D +
Sbjct: 501 LSLCPIDIDGDGDMDIV----SSTGGDSQIVWHENLDGQGNFGTQQLITLNADHPSSIYAVDVDGDGDNDVLAAALEGD-MITWYENTDGLGTFGPQQIISDETDYATSVYAS---DLDGDGDMDVLSASSADDKV 628
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A7C5KLD4_9BACT (VCBS repeat-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5KLD4_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 6.900e-6 Identity = 43/122 (35.25%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 25 DMDGDGDDDVVLGENT---DPGQQDRVVAFENDGFGGFMPAVLVLPGLQSPI-VESQGDIDGDGFEDLSVAQLNANALVLLHGSVDG-LMDITTTSFGGSLTGSVWTDLDGDGILDVAAARV 375
D DGDGD D+++G + PG QD++ + +G GGF LP + + GD DGDG D +A N ++L G + + + G T V DLDGDG LD+A AR+
Sbjct: 210 DFDGDGDLDLLIGNSPVYLGPGPQDKL--YLGNGKGGFKLVPGGLPRANTATNAIATGDWDGDGDLDFGIASSIGNPILLFQNQGKGTFLLLPPPTSKGLGTDLVLRDLDGDGKLDLALARM 329
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Match: A0A2E9TEV8_9CHLR (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E9TEV8_9CHLR) HSP 1 Score: 53.9 bits (128), Expect = 9.760e-6 Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 4 PLTLATLDMDGDGDDDVVLGENTDPGQQDRVVAFENDGFGGFMPAVLVLPGLQSPIVESQGDIDGDGFEDLSVA 225
P + +D+ GDG +++ + PGQ +V FENDG GG + +++ G P+ S GD DGDG DL+VA
Sbjct: 1173 PTGIEVVDLTGDGAEEICVTLAGSPGQ---LVIFENDGAGGVLQQIIIPTG-DEPVDVSSGDFDGDGNNDLAVA 1242 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112749.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112749.2650.1 >prot_M-pyrifera_M_contig112749.2650.1 ID=prot_M-pyrifera_M_contig112749.2650.1|Name=mRNA_M-pyrifera_M_contig112749.2650.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp MPLTLATLDMDGDGDDDVVLGENTDPGQQDRVVAFENDGFGGFMPAVLVLback to top mRNA from alignment at M-pyrifera_M_contig112749:104..499- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112749.2650.1 ID=mRNA_M-pyrifera_M_contig112749.2650.1|Name=mRNA_M-pyrifera_M_contig112749.2650.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig112749:104..499- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112749:104..499- >mRNA_M-pyrifera_M_contig112749.2650.1 ID=mRNA_M-pyrifera_M_contig112749.2650.1|Name=mRNA_M-pyrifera_M_contig112749.2650.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig112749:104..499- (Macrocystis pyrifera P11B4 male)back to top |