mRNA_M-pyrifera_M_contig112630.2636.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: A0A847Z9M4_9FIRM (Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium TaxID=2049045 RepID=A0A847Z9M4_9FIRM) HSP 1 Score: 68.6 bits (166), Expect = 2.160e-13 Identity = 34/88 (38.64%), Postives = 43/88 (48.86%), Query Frame = 1
Query: 1 MTEDKDWRL----DILRDETFALRAFKTPPDKPGLDHEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSERFEWRVDEN 252
M++ DWRL + + +K P + DH+HCE CF KF + EG GY T D WICE CF DF + F W V N
Sbjct: 1 MSDKNDWRLSDHDEFYNNLQLKHAQYKRPSES--WDHDHCEFCFDKFSEY--EGDLHEGYCTLDNYHWICEVCFNDFKDLFNWSVINN 84
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: A0A4Q7PKL7_9FIRM (Uncharacterized protein n=1 Tax=Cuneatibacter caecimuris TaxID=1796618 RepID=A0A4Q7PKL7_9FIRM) HSP 1 Score: 64.7 bits (156), Expect = 6.440e-12 Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 1
Query: 85 PGLDHEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSERFEWRVDE 249
PG DH+HCE C++ F D G +GY T D WICE C+ DF E FEW++ E
Sbjct: 28 PGNDHDHCEFCWETFSVYD--GDLHKGYCTLDRYKWICEDCYEDFKETFEWKLTE 80
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: A0A7V6M230_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7V6M230_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 4.390e-11 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 76 PDKPGLDHEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSERFEWRVDE 249
P KPG DH+HC C F EG ++GY+T D WIC C+ DF + FEW++++
Sbjct: 30 PYKPGWDHDHCAFCGDTFSM--NEGDIKQGYSTIDSYYWICNQCYDDFKDEFEWQIED 85
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: UPI001CA7E704 (hypothetical protein n=1 Tax=Dactylosporangium vinaceum TaxID=53362 RepID=UPI001CA7E704) HSP 1 Score: 61.6 bits (148), Expect = 1.350e-10 Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 10 DKDWRLDILRDETFA----LRAFKTPPDKPGLDHEHCEACFQKFMDLDREGID-RRGYATAD-GRSWICEACFADFSERFEWRV 243
D DWRL + T+ LR + P +PG H+HC C + ++ E GY TAD G +WIC+ CF DF ++F W+V
Sbjct: 3 DGDWRL--MGQHTWLAGRPLRRRQWTPHRPGWGHDHCAFCHAEIAAVETEHASLTSGYVTADDGYTWICQPCFDDFKDKFNWQV 84
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: A0A3C0NVF8_9PROT (Uncharacterized protein n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3C0NVF8_9PROT) HSP 1 Score: 61.2 bits (147), Expect = 1.770e-10 Identity = 22/50 (44.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 94 DHEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSERFEWRV 243
DH+HCE C QK DLD + G+ D WICE+CF +F E ++W++
Sbjct: 36 DHDHCEFCLQKITDLDISDSIKEGWTNQDEGLWICESCFEEFKEMYQWKL 85
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: UPI0011853479 (hypothetical protein n=1 Tax=Janthinobacterium agaricidamnosum TaxID=55508 RepID=UPI0011853479) HSP 1 Score: 60.5 bits (145), Expect = 2.850e-10 Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 1
Query: 16 DWRLD----ILRDETFALRAFKTPPDKPGLDHEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSERFEWR 240
DWRL L+ + ++ D G DH+HCE C +KF +D GYAT D WIC+ CF DF E F+W+
Sbjct: 3 DWRLQGQEKYLKGVVLHKKKYRCYKD--GWDHDHCEFCGEKFS-VDIPDTLYVGYATKDNYHWICDTCFHDFKEMFDWK 78
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: D2MMS7_9FIRM (Uncharacterized protein n=1 Tax=Bulleidia extructa W1219 TaxID=679192 RepID=D2MMS7_9FIRM) HSP 1 Score: 60.1 bits (144), Expect = 4.880e-9 Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 16 DWRLDILRD----ETFALRAFKTPPDKPGLDHEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSE 225
DW LDI+ D +T+ L P DH+HCE CF+K M++D G ++ GY T D W+C+ CF+ + +
Sbjct: 16 DWGLDIVLDNIEYKTYYLE--DNLGQYPNFDHDHCELCFEKIMNID--GCEKEGYVTLDFYYWLCKDCFSKYHQ 85
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Match: M2BQE5_TREDN (Uncharacterized protein n=2 Tax=Treponema denticola TaxID=158 RepID=M2BQE5_TREDN) HSP 1 Score: 54.3 bits (129), Expect = 9.090e-7 Identity = 25/52 (48.08%), Postives = 30/52 (57.69%), Query Frame = 1
Query: 97 HEHCEACFQKFMDLDREGIDRRGYATADGRSWICEACFADFSERFEWRVDEN 252
H+HCE C KF G RGYAT D WICE CF DF + F ++V +N
Sbjct: 187 HDHCEFCRTKFG---YSGGLERGYATKDRYLWICEKCFEDFKDMFNFKVIQN 235 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112630.2636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112630.2636.1 >prot_M-pyrifera_M_contig112630.2636.1 ID=prot_M-pyrifera_M_contig112630.2636.1|Name=mRNA_M-pyrifera_M_contig112630.2636.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp MTEDKDWRLDILRDETFALRAFKTPPDKPGLDHEHCEACFQKFMDLDREGback to top mRNA from alignment at M-pyrifera_M_contig112630:277..531+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112630.2636.1 ID=mRNA_M-pyrifera_M_contig112630.2636.1|Name=mRNA_M-pyrifera_M_contig112630.2636.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig112630:277..531+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112630:277..531+ >mRNA_M-pyrifera_M_contig112630.2636.1 ID=mRNA_M-pyrifera_M_contig112630.2636.1|Name=mRNA_M-pyrifera_M_contig112630.2636.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig112630:277..531+ (Macrocystis pyrifera P11B4 male)back to top |