mRNA_M-pyrifera_M_contig112605.2629.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112605.2629.1
Unique NamemRNA_M-pyrifera_M_contig112605.2629.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A2D8GHV7_9ACTN (Peptide chain release factor 1 n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GHV7_9ACTN)

HSP 1 Score: 310 bits (795), Expect = 1.970e-103
Identity = 155/194 (79.90%), Postives = 182/194 (93.81%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFA+DLF M+E++AKRQGWR E++ +S SDLGGFSEVT +LSGDAVWTRMKHEAGTHRVQRVPVTESQGR+HTSSAT++ +PEA+EVE++++DNDLRIDTYR+SG GGQSVNTMDSAVRITH+PTGV VSMQDEKSQLKNK+KA+RVL+SRLL +EQEKA+AEA+ LR SQV +GDRSEKIRTYN+KENRVTD
Sbjct:  123 NLFAKDLFDMFESFAKRQGWRMEVMSASHSDLGGFSEVTAMLSGDAVWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVLVIPEADEVEIEVDDNDLRIDTYRASGPGGQSVNTMDSAVRITHLPTGVVVSMQDEKSQLKNKDKALRVLKSRLLQLEQEKADAEAAALRGSQVGSGDRSEKIRTYNYKENRVTD 316
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A7X5WNC7_9ACTN (Peptide chain release factor 1 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNC7_9ACTN)

HSP 1 Score: 310 bits (794), Expect = 2.790e-103
Identity = 158/194 (81.44%), Postives = 179/194 (92.27%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLF MY+A+AKR GW  E+L +SPS+LGG++EVT LLSGD+VWTRMKHEAGTHRVQRVPVTESQGR+HTSSAT++ LPEA+EV+VDI+DNDLRIDT+R+SG GGQSVNT DSAVRITHVPTGV VSMQDEKSQLKNK+KA+RVLRSRLL +EQEKA AEA+DLR  QV +GDRSEKIRTYNFKENRVTD
Sbjct:  123 NLFARDLFQMYDAFAKRMGWTLEVLSTSPSELGGYAEVTALLSGDSVWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVIVLPEADEVDVDIDDNDLRIDTFRASGPGGQSVNTTDSAVRITHVPTGVVVSMQDEKSQLKNKSKALRVLRSRLLQMEQEKAAAEAADLRKGQVGSGDRSEKIRTYNFKENRVTD 316
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A6B1B021_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B021_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 6.070e-100
Identity = 155/194 (79.90%), Postives = 174/194 (89.69%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDL  MYE++AKR  WR E+L SSP++LGG SEVT LL+GD+VWTRMKHEAGTHRVQRVPVTESQGR+HTSSAT+M LPE EEVEV I+DNDLR+DTYR+SG GGQSVNTMDSAVRI H PTG+ V+MQDEKSQLKNKNKAMRVLR+RL  +EQE+A+AEASDLR  QVS GDRSEKIRTYNFKENR+TD
Sbjct:  123 NLFARDLLVMYESFAKRMNWRMELLSSSPTELGGLSEVTALLAGDSVWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVMVLPEPEEVEVHIDDNDLRVDTYRASGHGGQSVNTMDSAVRIVHEPTGLVVTMQDEKSQLKNKNKAMRVLRARLGQLEQERADAEASDLRRGQVSMGDRSEKIRTYNFKENRLTD 316
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A7Y2DBY0_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DBY0_9ACTN)

HSP 1 Score: 280 bits (716), Expect = 2.050e-91
Identity = 140/194 (72.16%), Postives = 167/194 (86.08%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDL+ M+  +AKRQGW  E++GS PSD+GGF+++T +L GDAVWTRMK E GTHRVQRVPVTESQGR+HTSSAT+  LPEA+EVEV++++NDL++D YRSSG GGQSVNT DSAVRITH PTG+TVSMQDEKSQ++NK KA+RVLR+RLL  E+E+  AE S  R  QV +GDRSEKIRTYNFKENRVTD
Sbjct:  126 NLFARDLYEMFTTFAKRQGWGLEVMGSHPSDMGGFTDITFVLKGDAVWTRMKFEGGTHRVQRVPVTESQGRVHTSSATVTVLPEADEVEVEVDENDLQVDYYRSSGPGGQSVNTTDSAVRITHKPTGITVSMQDEKSQIQNKAKALRVLRARLLKAEEERQQAELSAARKDQVKSGDRSEKIRTYNFKENRVTD 319
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: UPI001F39A174 (peptide chain release factor 1 n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F39A174)

HSP 1 Score: 278 bits (710), Expect = 1.820e-90
Identity = 143/194 (73.71%), Postives = 164/194 (84.54%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLF MY AYA R GW  E+LGSSPSDLGGF+EVT LL G  VW+RMKHEAG HRVQRVPVTESQGRIHTSSAT+  +PEA+E++V+I+ NDL++D +RSSG GGQSVNT DSAVRITH PTG+ VSMQDEKSQL+N+ KAM+VLR+RLL  EQE+ +AE S  R SQ+  G RSEKIRTYNFKENRVTD
Sbjct:  126 NLFARDLFEMYRAYAARMGWSLEVLGSSPSDLGGFAEVTFLLRGPGVWSRMKHEAGPHRVQRVPVTESQGRIHTSSATVTVMPEADEIDVEIDPNDLQVDVFRSSGPGGQSVNTTDSAVRITHKPTGIVVSMQDEKSQLQNRAKAMQVLRARLLQREQERQHAEQSSARKSQIGGGGRSEKIRTYNFKENRVTD 319
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A359F3Z0_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F3Z0_9ACTN)

HSP 1 Score: 277 bits (708), Expect = 3.140e-90
Identity = 143/194 (73.71%), Postives = 165/194 (85.05%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLF MY+ +A RQGW+ E+LGSSPSDLGG+SE++ LL G+  W+RMKHEAG HRVQRVPVTESQGRIHTSSAT+   PEAEEV+V+I+ NDL+ID YRSSG GGQSVNT DSAVRITH PTGVTVSMQDEKSQ++N+ KAM VLRSR+L  EQ++  AE SD R SQ+  G RSEKIRTYNFKENRV+D
Sbjct:  123 NLFARDLFEMYQGFAARQGWKLEVLGSSPSDLGGYSEISFLLKGEGAWSRMKHEAGPHRVQRVPVTESQGRIHTSSATVTVSPEAEEVDVEIDLNDLQIDYYRSSGPGGQSVNTTDSAVRITHKPTGVTVSMQDEKSQIQNRAKAMLVLRSRMLKAEQDRVAAEQSDARKSQIGGGGRSEKIRTYNFKENRVSD 316
[Close]
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A7X7HTT3_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HTT3_9ACTN)

HSP 1 Score: 276 bits (706), Expect = 6.110e-90
Identity = 139/194 (71.65%), Postives = 166/194 (85.57%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLFSMY+ YA+RQGW+ E+L + PSD+GG++EVT L+SGD  WTR+KHE G HRVQRVP TESQGRIHTSSAT+  LPEAEEV+V+I+ NDL++D YRSSG GGQSVNT DSAVR+TH PTGVTVSMQD+KSQL+NK KAM+VLRSRLL +EQ++  +E S+ R  QV  G RSEK+RTYNFKENRV+D
Sbjct:  123 NLFARDLFSMYQGYAQRQGWKTEVLNADPSDMGGYNEVTFLVSGDGAWTRLKHEGGPHRVQRVPATESQGRIHTSSATVTVLPEAEEVDVEIDANDLQVDYYRSSGPGGQSVNTTDSAVRLTHKPTGVTVSMQDQKSQLQNKAKAMQVLRSRLLKLEQDRQQSELSEARKDQVGGGGRSEKVRTYNFKENRVSD 316
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BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A6N8YBR8_9ACTN (Peptide chain release factor 1 n=11 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YBR8_9ACTN)

HSP 1 Score: 276 bits (705), Expect = 9.210e-90
Identity = 141/194 (72.68%), Postives = 168/194 (86.60%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLF MY+A+AKR+ W+ E L +SPSDLGG++EV+ L+SGD  WTRMKHEAGTHRVQRVPVTESQGR+HTSSAT+  LPEAEEV+V I+D +L++D +RSSG GGQSVNT DSAVRITH+P+G+ V+MQDEKSQL+NK KA+RVLRSRLL  EQ++A+AE S +R  QV  GDRSEKIRTYN KENRVTD
Sbjct:  123 NLFARDLFGMYQAFAKRRRWKLEPLAASPSDLGGYTEVSGLISGDQAWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVSVLPEAEEVDVRIDDAELQVDVFRSSGPGGQSVNTTDSAVRITHLPSGLVVAMQDEKSQLQNKQKALRVLRSRLLQAEQDRASAEQSAMRRGQVGGGDRSEKIRTYNMKENRVTD 316
[Close]
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: UPI001E392D8B (peptide chain release factor 1 n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E392D8B)

HSP 1 Score: 275 bits (702), Expect = 2.620e-89
Identity = 141/194 (72.68%), Postives = 163/194 (84.02%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLF MY A+A R GWRFE++ +  SDLGG+S++T  L+GD VWTRMKHE G HRVQRVPVTESQGRIHTSSAT+  LPEA+EV+V I+ NDLRID YRSSG GGQSVNT DSAVRITH+PTGV V+MQDEKSQ++N+ KA+RVLRSRLL  EQE+  +EAS  R +QV  G RSEK+RTYNFKENRVTD
Sbjct:  125 NLFARDLFEMYRAFAARMGWRFEIMDAQESDLGGYSDITFRLAGDGVWTRMKHEGGPHRVQRVPVTESQGRIHTSSATVTVLPEADEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVAMQDEKSQIQNREKALRVLRSRLLQAEQERQASEASGARRAQVGGGGRSEKVRTYNFKENRVTD 318
[Close]
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A3M2GBL2_ACTSX (Peptide chain release factor 1 n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GBL2_ACTSX)

HSP 1 Score: 275 bits (702), Expect = 3.250e-89
Identity = 138/194 (71.13%), Postives = 167/194 (86.08%), Query Frame = 1 
Query:    1 NLFARDLFSMYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 582
            NLFARDLF MY AYA+R+GW  E+L +SPSDLGG+SE++  + G+ VW+R++HEAGTHRVQRVPVTESQGRIHTSSAT+  LPEA+E+EVDI+D DLRI+ +R+SG GGQSVNT DSAVR+TH+PTG+TVSMQDEKSQL+N+ KA+RVLR+RLL   +E+A AE S LR  Q+  GDRSEKIRTYN KENRVTD
Sbjct:  123 NLFARDLFEMYSAYARRKGWTLEVLSASPSDLGGYSEISAAVRGEGVWSRLRHEAGTHRVQRVPVTESQGRIHTSSATVSVLPEADEIEVDIDDADLRIEVFRASGPGGQSVNTTDSAVRVTHLPTGITVSMQDEKSQLQNRQKALRVLRARLLQRAEEEAAAEMSALRRDQIGGGDRSEKIRTYNVKENRVTD 316
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8GHV7_9ACTN1.970e-10379.90Peptide chain release factor 1 n=5 Tax=Acidimicrob... [more]
A0A7X5WNC7_9ACTN2.790e-10381.44Peptide chain release factor 1 n=1 Tax=Actinomycet... [more]
A0A6B1B021_9ACTN6.070e-10079.90Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
A0A7Y2DBY0_9ACTN2.050e-9172.16Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
UPI001F39A1741.820e-9073.71peptide chain release factor 1 n=1 Tax=Rhabdotherm... [more]
A0A359F3Z0_9ACTN3.140e-9073.71Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
A0A7X7HTT3_9ACTN6.110e-9071.65Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
A0A6N8YBR8_9ACTN9.210e-9072.68Peptide chain release factor 1 n=11 Tax=Acidimicro... [more]
UPI001E392D8B2.620e-8972.68peptide chain release factor 1 n=1 Tax=Rhabdotherm... [more]
A0A3M2GBL2_ACTSX3.250e-8971.13Peptide chain release factor 1 n=1 Tax=Actinomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112605contigM-pyrifera_M_contig112605:2..583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score253.1
Seed ortholog evalue1e-64
Seed eggNOG ortholog525909.Afer_1808
Preferred nameprfA
KEGG koko:K02835,ko:K15034
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EggNOG OGs2GJWG@201174,4CMPQ@84992,COG0216@1,COG0216@2
COG Functional cat.J
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Exons1
Model size582
Cds size555
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815640.13127-UTR-M-pyrifera_M_contig112605:1..281622815640.13127-UTR-M-pyrifera_M_contig112605:1..28Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig112605 2..28 +
1692277500.47967-UTR-M-pyrifera_M_contig112605:1..281692277500.47967-UTR-M-pyrifera_M_contig112605:1..28Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig112605 2..28 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815640.1409912-CDS-M-pyrifera_M_contig112605:28..5831622815640.1409912-CDS-M-pyrifera_M_contig112605:28..583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112605 29..583 +
1692277500.4909565-CDS-M-pyrifera_M_contig112605:28..5831692277500.4909565-CDS-M-pyrifera_M_contig112605:28..583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112605 29..583 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112605.2629.1prot_M-pyrifera_M_contig112605.2629.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112605 29..583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112605.2629.1

>prot_M-pyrifera_M_contig112605.2629.1 ID=prot_M-pyrifera_M_contig112605.2629.1|Name=mRNA_M-pyrifera_M_contig112605.2629.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHR
VQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGG
QSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQE
KANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD
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mRNA from alignment at M-pyrifera_M_contig112605:2..583+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112605.2629.1 ID=mRNA_M-pyrifera_M_contig112605.2629.1|Name=mRNA_M-pyrifera_M_contig112605.2629.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig112605:2..583+ (Macrocystis pyrifera P11B4 male)
AACCTCTTCGCACGAGACCTGTTCTCGATGTACGAGGCCTACGCCAAGCG
CCAGGGTTGGCGTTTCGAGATGCTCGGGTCGTCGCCGTCCGACCTCGGCG
GGTTCTCCGAGGTGACGGTGCTGCTCAGCGGCGACGCCGTGTGGACTCGC
ATGAAGCACGAGGCGGGCACCCATCGCGTGCAGCGCGTTCCGGTCACCGA
ATCGCAGGGTCGTATCCACACCTCGTCGGCCACCCTGATGGCACTCCCCG
AGGCCGAGGAGGTCGAGGTCGACATCAACGACAACGACCTGCGCATCGAC
ACCTATCGGTCGAGCGGAGCCGGTGGTCAGTCGGTCAACACCATGGACTC
CGCCGTGCGTATCACGCACGTGCCCACCGGGGTGACGGTCTCGATGCAGG
ACGAGAAGAGCCAGCTCAAGAACAAGAACAAGGCCATGCGGGTACTGCGG
AGTCGTCTCCTCGCCATCGAACAGGAGAAGGCCAACGCGGAGGCATCCGA
CCTGCGGTCGAGCCAGGTCAGCACCGGCGACCGGTCCGAGAAGATCCGCA
CCTACAACTTCAAGGAGAACCGGGTCACCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig112605:2..583+

>mRNA_M-pyrifera_M_contig112605.2629.1 ID=mRNA_M-pyrifera_M_contig112605.2629.1|Name=mRNA_M-pyrifera_M_contig112605.2629.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig112605:2..583+ (Macrocystis pyrifera P11B4 male)
ATGTACGAGGCCTACGCCAAGCGCCAGGGTTGGCGTTTCGAGATGCTCGG
GTCGTCGCCGTCCGACCTCGGCGGGTTCTCCGAGGTGACGGTGCTGCTCA
GCGGCGACGCCGTGTGGACTCGCATGAAGCACGAGGCGGGCACCCATCGC
GTGCAGCGCGTTCCGGTCACCGAATCGCAGGGTCGTATCCACACCTCGTC
GGCCACCCTGATGGCACTCCCCGAGGCCGAGGAGGTCGAGGTCGACATCA
ACGACAACGACCTGCGCATCGACACCTATCGGTCGAGCGGAGCCGGTGGT
CAGTCGGTCAACACCATGGACTCCGCCGTGCGTATCACGCACGTGCCCAC
CGGGGTGACGGTCTCGATGCAGGACGAGAAGAGCCAGCTCAAGAACAAGA
ACAAGGCCATGCGGGTACTGCGGAGTCGTCTCCTCGCCATCGAACAGGAG
AAGGCCAACGCGGAGGCATCCGACCTGCGGTCGAGCCAGGTCAGCACCGG
CGACCGGTCCGAGAAGATCCGCACCTACAACTTCAAGGAGAACCGGGTCA
CCGATATGTACGAGGCCTACGCCAAGCGCCAGGGTTGGCGTTTCGAGATG
CTCGGGTCGTCGCCGTCCGACCTCGGCGGGTTCTCCGAGGTGACGGTGCT
GCTCAGCGGCGACGCCGTGTGGACTCGCATGAAGCACGAGGCGGGCACCC
ATCGCGTGCAGCGCGTTCCGGTCACCGAATCGCAGGGTCGTATCCACACC
TCGTCGGCCACCCTGATGGCACTCCCCGAGGCCGAGGAGGTCGAGGTCGA
CATCAACGACAACGACCTGCGCATCGACACCTATCGGTCGAGCGGAGCCG
GTGGTCAGTCGGTCAACACCATGGACTCCGCCGTGCGTATCACGCACGTG
CCCACCGGGGTGACGGTCTCGATGCAGGACGAGAAGAGCCAGCTCAAGAA
CAAGAACAAGGCCATGCGGGTACTGCGGAGTCGTCTCCTCGCCATCGAAC
AGGAGAAGGCCAACGCGGAGGCATCCGACCTGCGGTCGAGCCAGGTCAGC
ACCGGCGACCGGTCCGAGAAGATCCGCACCTACAACTTCAAGGAGAACCG
GGTCACCGAT
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