mRNA_M-pyrifera_M_contig112437.2600.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A831UJV6_9BACT (PKD domain-containing protein (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UJV6_9BACT) HSP 1 Score: 165 bits (418), Expect = 6.080e-44 Identity = 101/198 (51.01%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 1 VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTI---QVIPAPDFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVNPV-PT--FTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYVAA 576
++ WAWDFGDG +ST QNP HTY AG++ A+ T+TT G + + T+ P FSATP SG P L V+FTD + G + + W FGDGGTS +PTH Y + GTY VSLTV TS G T TK Y+ V PV PT F AS SG +P V FTD +T G+ T++AW FGDGGTS+ QNP+HTY AA
Sbjct: 529 ITAWAWDFGDGASSTQQNPTHTYEEAGTYAATLTVTTAVGSDSDELSITVTGEDTPPTAAFSATPFSGGPPLVVAFTDESAPGSDAITAWAWTFGDGGTSTQQNPTHTYASVGTYDVSLTVTTSVGQDTATKAAYITVEPVGPTAAFDASPRSGMAPLDVQFTDQSTAGTSPITSWAWTFGDGGTSTQQNPTHTYQAA 726
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A7C5ABQ1_9BACT (PKD domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5ABQ1_9BACT) HSP 1 Score: 161 bits (408), Expect = 1.880e-42 Identity = 103/197 (52.28%), Postives = 128/197 (64.97%), Query Frame = 1
Query: 1 VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTIQVIPAP---DFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN---PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYVA 573
V++W+WDFGDG TSTAQNP HTYTSAGSFD + T+T G T+ + P DFS TPLSG L V+FTD L ++ S WNFGDG +S +P+H Y + GTYTVSLTV G+ T TKT YV V+ PV F+ + SG +P V FTD +T GSVT +++WNFGDG TS+AQNPSHTY +
Sbjct: 1108 VTSWSWDFGDGTTSTAQNPSHTYTSAGSFDVTLTVTGPGGSDTLTKTAYVTATTTPPVADFSGTPLSGAAPLIVAFTD---LSTGSVTSWSWNFGDGASSTAQNPSHTYASAGTYTVSLTVTGPGGSDTMTKTGYVVVSEAPPVADFSGTPLSGTAPLVVAFTDLST-GSVT--SWSWNFGDGTTSTAQNPSHTYAS 1298
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A7V2Y1F9_9BACT (PKD domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y1F9_9BACT) HSP 1 Score: 152 bits (383), Expect = 4.360e-39 Identity = 91/198 (45.96%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTIQVIP--APD--FSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVNP----VPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYV 570
++ W WDFGDG TS +NP HTYT +G F S T+ ++ G +T P + V P AP FS PL+G + V FTD + G + + LWNFGDG +S + +P+H Y G +TVSLTV ++ G +TET+ Y+ V P + F+A+ TSG P TV FTD +T GS T +AW FGDGGTS+ NPSHTY
Sbjct: 1456 ITAWLWDFGDGTTSVQRNPSHTYTGSGVFTVSLTVVSDMGSNTRTQPSAVSVQPGVAPSAAFSGAPLTGSRPITVQFTDESASGTSPIVQWLWNFGDGASSAEQNPSHTYDAVGDFTVSLTVTSAAGNSTETRIGYIHVEPGILPIAAFSAAPTSGFRPLTVQFTDESTEGSKAITQWAWTFGDGGTSTQPNPSHTYT 1653
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A7V5PPK2_9BACT (PKD domain-containing protein n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V5PPK2_9BACT) HSP 1 Score: 149 bits (375), Expect = 3.320e-38 Identity = 94/198 (47.47%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTIQVIP--APDFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN------PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYV 570
+++W+WDFGDG TST QNP HTY + G++ S T+T G T I V DFS +P SG L V+FTD + G T S W+FGDGGTS + +P+H YT GTYTV LT + S + T+TKTDY+ V PV FT S TSG +P V+FTD +T PT+++W+FGDGGTS+ QNP H Y
Sbjct: 299 ITDWSWDFGDGTTSTEQNPTHTYNNPGNYTVSLTVTGPGGSDTETKTDYITVYQPITADFSGSPTSGDAPLTVNFTDQST-GDVTAWS--WDFGDGGTSTEQNPSHEYTAAGTYTVKLTASNSCDSDTKTKTDYITVTEPAGEPPVADFTGSPTSGTAPLLVSFTDQSTNN---PTSWSWDFGDGGTSTEQNPQHEYA 490
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A849M9N7_9BACT (PKD domain-containing protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A849M9N7_9BACT) HSP 1 Score: 148 bits (374), Expect = 6.570e-38 Identity = 98/207 (47.34%), Postives = 128/207 (61.84%), Query Frame = 1
Query: 1 VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLT--------TEAGDSTVPMPPTIQVIPAPDFSATPLSGPPTLAVSFTD-TTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN------PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYVAA 576
V+ W WDFGDG +ST+QNP HTY +AG++ + T + T+ TV PP +P DFS TPLSG L V+FTD TTN S W+FGDGG+S +P+H Y + GTYTV+LT S GT TETK DY+ V PV F+ + SG +P V+FTD TT PT+++W+FGDGG+S+AQNP+HTY +A
Sbjct: 621 VTGWNWDFGDGGSSTSQNPNHTYNAAGTYTVTLTASNACASDGATKTDYITVTDPPCD--LPVADFSGTPLSGDSPLNVAFTDNTTN----NPTSWSWDFGDGGSSTSQNPSHTYNSAGTYTVALTSTNSCGTDTETKVDYITVTDPPCDLPVAEFSGTPVSGDTPLNVSFTDNTTNN---PTSFSWDFGDGGSSTAQNPNHTYNSA 818
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A800JPX9_9BACT (PKD domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800JPX9_9BACT) HSP 1 Score: 147 bits (372), Expect = 1.310e-37 Identity = 95/197 (48.22%), Postives = 123/197 (62.44%), Query Frame = 1
Query: 1 VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTIQVI---PAPDFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN---PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYVA 573
VS+WAWDFGDG TS+AQNP HTYT+AG++ S T T G T+ I V P DFS TP SG L VSF+D ++ + S W+FGDGGTS SP+H Y GTY+VSL V ++ GT T +T+Y+ V+ PV F+ + T G P +V F D ++ G +T ++AW FGDGGTSS QNPS+ Y A
Sbjct: 1134 VSSWAWDFGDGGTSSAQNPAHTYTAAGTYSVSLTATGPGGSDTLMRTAYISVAEPPPVADFSGTPTSGTNPLTVSFSDASS---GAVTSWAWDFGDGGTSTLQSPSHTYAAVGTYSVSLAVTSAGGTDTLLRTNYIVVSDPPPVAAFSGTPTGGTVPLSVAFADASS-GPIT--SWAWTFGDGGTSSLQNPSYVYSA 1324
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A7I6H5_METB6 (PKD domain containing protein n=1 Tax=Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8) TaxID=456442 RepID=A7I6H5_METB6) HSP 1 Score: 143 bits (360), Expect = 9.130e-37 Identity = 96/197 (48.73%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 4 SNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTI---QVIPAPD--FSATPLSGPPTLAVSFTD-TTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN---PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTY 567
S+W W FGDG +S NPVHTYTS GS+ + T T AG +T + I QV AP F AT SG L V F D +TN + NS +W+FGDGGTS +PTH YT GTYTVSLT G++T T+T Y+ VN P +FT++ T+G +P +V FTDT+ TPTA+ W FGDG TS+ QNP HT+
Sbjct: 141 SSWVWSFGDGGSSGGANPVHTYTSQGSYTVTLTATNSAGSNTTSLANYITITQVTAAPTALFKATATSGYGPLTVQFVDASTN----SPNSWVWSFGDGGTSTLQNPTHTYTAAGTYTVSLTATNVVGSSTATQTGYITVNAATPFSSFTSNVTAGINPLSVQFTDTSNN---TPTAWYWTFGDGSTSTLQNPVHTF 330
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: Q8TPZ1_METAC (Cell surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) TaxID=188937 RepID=Q8TPZ1_METAC) HSP 1 Score: 145 bits (365), Expect = 1.170e-36 Identity = 91/194 (46.91%), Postives = 119/194 (61.34%), Query Frame = 1
Query: 4 SNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTIQV---IPAPDFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN---PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTY 567
++WAWDFGDG TST QNP+HTY + GS+ + T++ G ST+ I V IP +F+A+ G L V FTDT+ + S W+FGDG TS + P H Y G YTV+LTV+ S G T KTDY+ V+ PV F +S T G +P TV FTDT+T+ PT++AW+FGDG TS+ Q P HTY
Sbjct: 1768 ASWAWDFGDGTTSTEQNPMHTYAADGSYTVNLTVSNSYGSSTLVKTDYITVGSSIPVANFTASVTGGNAPLTVQFTDTSTINPT---SWAWDFGDGTTSTEQKPVHTYAADGNYTVNLTVSNSYGNNTCVKTDYIIVSSGVPVANFVSSVTGGNAPLTVQFTDTSTIN---PTSWAWDFGDGTTSTEQKPVHTY 1955
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A7T9HGF1_9EURY (PKD domain-containing protein n=1 Tax=Methanolinea sp. TaxID=2268143 RepID=A0A7T9HGF1_9EURY) HSP 1 Score: 144 bits (364), Expect = 1.520e-36 Identity = 96/197 (48.73%), Postives = 118/197 (59.90%), Query Frame = 1
Query: 10 WAWDFGDGNTSTAQNPVHTYTSAGS----FDASPTLTTEAGDSTVPMPPTIQVIPAPDFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN----PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYVAA 576
W WDFGDG+TST QNP HTYTS G+ F AS E +++ + V P DF+ATPL GP L V+FTDT+ + G T + W+FGD GTS + +P H Y PG YTVSLTV + G+ TETK +Y+ V PV FTAS SG P VNF D + S T +AW+FGDG TS +NP HTY A
Sbjct: 593 WFWDFGDGDTSTLQNPSHTYTSDGTYAVTFTASRCPVAECASTSLNTT-VVHVGPQADFTATPLVGPAPLTVTFTDTSTVTGTTYH---WDFGDSGTSAEQNPVHKYMNPGLYTVSLTVTGTFGSDTETKVNYIDVRTPLGPVADFTASPQSGTVPLAVNFID---MSSGDCTDWAWDFGDGLTSDERNPVHTYTVA 782
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Match: A0A0E3WWA4_METBA (Cell surface protein n=1 Tax=Methanosarcina barkeri 3 TaxID=1434107 RepID=A0A0E3WWA4_METBA) HSP 1 Score: 142 bits (359), Expect = 7.190e-36 Identity = 92/191 (48.17%), Postives = 116/191 (60.73%), Query Frame = 1
Query: 10 WAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAG-DSTVPMPPTIQVIPAPDFSATPLSGPPTLAVSFTDTTNLGGATLNSVLWNFGDGGTSMDASPTHNYTTPGTYTVSLTVNTSEGTATETKTDYVAVN---PVPTFTASATSGASPFTVNFTDTTTLGSVTPTAYAWNFGDGGTSSAQNPSHTYV 570
W WDFGDG TS QNP HTY GS++ + T+T G DS + I DF+ATPLSG L V+FTD + T S W+FGDG TS + +PTH Y+TPGTYTV+LTV GT + KT Y+ V+ PV FTA+ T+G+SP TV F D + P + W+FGDG TS+ QNP+HTY
Sbjct: 406 WTWDFGDGTTSNEQNPKHTYNIPGSYNVTLTVTNANGNDSRIKTNYIITNSLVADFTATPLSGGAPLTVTFTDQST---GTPTSWAWDFGDGATSKENNPTHIYSTPGTYTVNLTVTNIGGTNSTVKTGYITVSTITPVANFTATRTTGSSPLTVQFMDQSKN---VPAEWFWDFGDGTTSTEQNPTHTYT 590 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112437.2600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112437.2600.1 >prot_M-pyrifera_M_contig112437.2600.1 ID=prot_M-pyrifera_M_contig112437.2600.1|Name=mRNA_M-pyrifera_M_contig112437.2600.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp VSNWAWDFGDGNTSTAQNPVHTYTSAGSFDASPTLTTEAGDSTVPMPPTIback to top mRNA from alignment at M-pyrifera_M_contig112437:2..577- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112437.2600.1 ID=mRNA_M-pyrifera_M_contig112437.2600.1|Name=mRNA_M-pyrifera_M_contig112437.2600.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig112437:2..577- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112437:2..577- >mRNA_M-pyrifera_M_contig112437.2600.1 ID=mRNA_M-pyrifera_M_contig112437.2600.1|Name=mRNA_M-pyrifera_M_contig112437.2600.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1152bp|location=Sequence derived from alignment at M-pyrifera_M_contig112437:2..577- (Macrocystis pyrifera P11B4 male)back to top |