mRNA_M-pyrifera_M_contig1124.2589.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: D7FV82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV82_ECTSI) HSP 1 Score: 607 bits (1565), Expect = 7.570e-208 Identity = 380/711 (53.45%), Postives = 439/711 (61.74%), Query Frame = 1
Query: 1 QVAGNGDMVTAKFAETQIRALVNAELEACLVLHESQDFWQQRVERSGGTLRNWIEMGPLTWSTHSLDNCCEEYLGRLSRCRKMLRIKILSVGSLQLHLTQMKQAYIEDTLAEWNETALTTIRTALE-SREAARRINTNVT------------SNPRRPLAAATPS--ASGRSLGEAYGRV-----DVATVRRGQSLFRRAAS----------FARINSWVGD-------------LQGAGEENDERDA----------------------GAVQDRNQSACGSLN----GDGDEKVGVARADLVGLLADEP----------QEGRVMEALLVTSEQVIADVGAQQE-AVPSLLGNAAPPSRLRRNWSLIAVATPAVLATAFFMYTN-------------------------------------------------SLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYYLLKAEKSRDSTFKAMRTIVLAMERLLNLRHREGTWLQLTEDVP-SGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGRMAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFLLPSR 1731
++AG+ DM+ A FAE QIRALVN ELEACLVLHES++FWQ R++R G + NWIEMGP TW TH+ +CCE YLG LSRC+++LR KILS GSLQLHLTQMKQAY+E TL+EW AL I+ LE S + +N+ + S+PRR LA+A S S + RV VA RGQS+ RR S FA+ S GD QG + +E DA G N+ G + G +E+ G+ARAD LL D QEG ++ ALL TSE+++A V QQ+ +P LLG A PSR+RRNW IAVATPA L F+MY N SL+RMLEAFIKDT+P L +VK+MA T DMSVVSREYE SI +AWKN VAGDI RM VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGS+RAVRP YY LK+EKSR+STF AM TIVLAMERLLNLRHREGTWLQL D P + D + G RRRGSLL+P GHSDNCT QV+VSAG+GQG MAVRVLDELDLGKLMML+HQ+ RLIRSGPRRF RRDL + EDLAELVGERGLVSVGQQL I QR+QRSY FLLP R
Sbjct: 57 EMAGDEDMLAANFAEAQIRALVNNELEACLVLHESKEFWQHRLDRPGANILNWIEMGPWTWKTHTTRDCCEYYLGSLSRCKRLLRNKILSAGSLQLHLTQMKQAYMEGTLSEWTAAALVLIQRTLEPSTDGITPVNSTTSGGSSTSRRRSRSSHPRRSLASALTSRDCSPTHRNGIWRRVRSDGSSVAKNTRGQSVLRRVLSLGRRDRHAQEFAQGGSGDGDDGQSEGGQQQVESSQGEEDATEEGDATKAHNCLKKGGDKPAAFRTSIEGTSDGSNRDPAGPPSPVPPGPEEEEAGLARADFADLLRDAQEGVEAGIGAGQEGDIIRALLRTSEELVATVETQQKNRIPLLLGRFAAPSRIRRNWMFIAVATPAALVAMFYMYRNRWLHDEGLQRWRQFVREHISEPFWGIYNELVHNQPLTLTDANALADSSFSLQRMLEAFIKDTKPNLSEGEVKKMARTGDMSVVSREYERSIINAWKNFVAGDIVRMMLIQVQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSYRAVRPAYYWLKSEKSRESTFTAMCTIVLAMERLLNLRHREGTWLQLAADHPVAADEKKAEGEVGLPRRRGSLLKPLGHSDNCTRQVVVSAGRGQGLMAVRVLDELDLGKLMMLVHQVLRLIRSGPRRFPRRDLVNLHEDLAELVGERGLVSVGQQLQIVQRVQRSYKFLLPRR 767
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: A0A6H5L2V1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V1_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.880e-36 Identity = 127/349 (36.39%), Postives = 170/349 (48.71%), Query Frame = 1
Query: 1 QVAGNGDMVTAKFAETQIRALVNAELEACLVLHESQDFWQQRVERSGGTLRNWIEMGPLTWSTHSLDNCCEEYLGRLSRCRKMLRIKILSVGSLQLHLTQMKQAYIEDTLAEWNETALTTIRTALE-SREAARRINTNVT------------SNPRRPLAAATPS----------------ASGRSLGEAYGRVDVATVRRGQSLFRR---AASFARINSWVGD-------------LQGAGEENDERDAGAVQD-------RNQSACGSLNGDGD-------------------EKVGVARADLVGLLADEP----------QEGRVMEALLVTSEQVIADVGAQQEA 804
++AG+ DM+ A FAE QIRALVN ELEAC+VLHES++FWQ R++R G + NWIEMGP TW TH+ +C E YLG LSRCR++LR KI AY+E TL+EW AL I+ LE S + R+++ + S+PRR LA+A S + G S+ E + RV + +RR SL RR A FA+ S GD QG + +E DA D + + S+ G D E+ G+ARADL LL D Q G ++ ALL TSE+++A V QQ+A
Sbjct: 72 EMAGDEDMLAANFAEAQIRALVNNELEACVVLHESKEFWQHRLDRLGANILNWIEMGPWTWKTHTTRDCWEYYLGSLSRCRRLLRNKI---------------AYMEGTLSEWTAAALVLIQRTLEASADGITRVSSTTSGGSXXSRRRSRSSHPRRSLASALTSRDCSPTHRNGIWRRVGSDGSSVAE-HKRVQ-SVLRRVLSLGRRDRHAQEFAQGGSGDGDDGQSEGGQQQVENSQGQEDATEEGDATTAHDCVKNGGDKPAAFRTSIEGTSDGSNRDPGGPPSPVPPGPEEEETGLARADLADLLRDAQEGMEAGIGAGQGGDIIGALLRTSEELVATVETQQKA 403
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: W7TUU3_9STRA (Nuclear control of ATP synthase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUU3_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.670e-33 Identity = 180/657 (27.40%), Postives = 267/657 (40.64%), Query Frame = 1
Query: 37 FAETQIRALVNAELEACLVLHESQDFWQQRVERSGGTLRNWIEMGPLTWSTHSLDNCC-EEYLGRLSRCRKMLRIKILSVGSLQLHLTQMKQAYIEDTLAEWNETALTTIRTAL-ESREAARRINTNVTSNPRRPLAAATPS--ASGRSLGEAYGRVDVATVRRGQ--SLFRRAASFARINS-----WVGDLQGAGEENDERDAGAVQDRNQSACGSLNGDGDEKVGVARADLVGLLADEPQEGRVMEALLVTSEQVIADVGAQQEAVPS-LLGNAAPPSRLRRNWSLIAVATPAVLATAFFMYTNSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYYLLKAEKSRDSTFKAMRTIVLAMERLLNLRH-----REGTWLQLTE-------------DVPSGDGIGTQAGG--------GTARRRGSLLRPSGHSDNCTSQVI-------------VSAGQGQGRMA-----------------------VRVLDEL-----------------DLGKLMMLIHQLRRLIRSGPRRFKRR-DLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFL 1719
F E Q+R + +EL+ L+ FWQ R+ R L W+E GP +W + E+ L L R M++I + G +Q HL++ L EW AL I L + E+ R+ ++ P A+A P +S +L E R+ R + F +A S R S W+ L A + + + G D P+ V +A+ T E + V A+ L+ N ++ A L A SL RML F++DT P+LP + + +AA DMSVVS YE S+ A ++++ G+I RM VQFIK+ELL+A I + N LN R+MA PA L +G+++ + V Y L K R T +R+ +L+MER+LNLR+ E +L+L V D QA G R+GS + T + + G+G+G LD+L DLG L++LIHQ ++++ RRF +L + QEDL E++G G V+V QQL + QRM RSY FL
Sbjct: 90 FVECQLRICLESELDLSGTLYWDCLFWQDRISRP---LEAWLEAGPFSWFQDPDEVMTPEDKLEYLQRV--MVQINV-GAGLVQQHLSRKLVNTDVQYLGEWTAEALALIDDILSDDFESPGRLEMRTSARQLLP-ASAQPGFVSSVVALKECMARLTTLRTRISTRAACFHKATSHLRAPSFLRRRWLHILVAA----------------------------PFLFFSLRWVWGKRGDIPRW--VAQAVRSTREFFLEHVSEPSRAIAKELIWNEHE-----------SITDVAALEDA----KESLARMLADFVRDTNPKLPEEERRALAANMDMSVVSSRYEQSLPQAMRHIINGEIVRMLLIQVQFIKKELLVAMRGIDDVMNSNNLNFRLMAIFPAVLAMYGTYQGTKAVTYKLTRRKGRGETIMLLRSFLLSMERMLNLRNVGASENEIKYLKLNRPAAFHANSFSLGGSVGQSDAQHQQAPSVFSPTPVEGEEARKGSRMPLESIRQRSTESIDDGNSSDYDHVAEDETPGKGEGEAGDSHRGSLPMLEERREEEVPFVSRASTLDDLERGTFNAEPRVVFLKPEDLGVLLLLIHQFAQVVQRTSRRFLTDLELRNLQEDLNEIIGNCGPVTVAQQLCVVQRMHRSYRFL 694
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: A0A7S2LEI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI8_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.690e-33 Identity = 101/273 (37.00%), Postives = 148/273 (54.21%), Query Frame = 1
Query: 916 NSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYY-LLKAEKSRDSTFKAMRTIVLAMERLLNLRHREGTWLQLTEDVPSGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGRMAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFL 1719
NSL+ ML+A++ D P MA DMS++ ++ E ++ +A K+ GDI RM VQFIK+EL+ A I ++ NELN ++ AT PA +L + + +Y LLK +S++ T+ + R ++L +ERLL +R L P DGI T AG R LR G S + + ++ + V +L+ DLG L++L+H+ R LI RRF +++ + EDLAEL GERG VSV QQL I RM R Y F+
Sbjct: 37 NSLKNMLKAWLDDQYPHTDEAWRANMANNMDMSLIEKKKEDNVLNALKSTFTGDIIRMGLIEVQFIKKELMHAMKGIDEVMDSNELNFQLAATAPALMLMYAAREFAHFFFYALLKLGQSKEETYASFRYLMLEIERLLVMRDSA-----LLVPPPLKDGI-TVAG----NNRTENLRRRGMSFDESEDLLEESD-------VVMLNTNDLGMLVLLVHECRTLILKNKRRFSDQEIRNVLEDLAELSGERGCVSVKQQLEIVSRMSRVYSFM 292
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: A0A7S2UIW5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIW5_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.390e-32 Identity = 94/278 (33.81%), Postives = 146/278 (52.52%), Query Frame = 1
Query: 919 SLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYY-LLKAEKSRDSTFKAMRTIVLAMERLLNLRHREG------TWLQLTEDVPSGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGRMAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFL 1719
SL+ M+ +++ DT PE+P++ + +A T D+S++ R+ E SI ++ + RM +QFIK+EL+ A A+ +L NE+N+ + + PA LL +G+ + +YY LLK KSR+ T+ + R ++L MERLL +R TW G + ++ L P + ++ + V VL DLG LM+ IH+ R ++ +RF R+ + D EDL+EL GERG VSV QQL I RM R+Y FL
Sbjct: 3 SLKNMIRSWLDDTYPEMPVSQRESLANTMDVSLIERKKEDSIKHIYE---INSVVRMSLIEMQFIKKELMNAMYAMDELMSSNEININLASVTPAVLLLYGANHTFKFLYYALLKLGKSREETYASFRLVLLDMERLLLMRSNPPLAPPPLTW-------------------GESSKKNLLSSP-----HFGPMIVDDSSTRANNGDVTVLKSDDLGMLMLHIHECRTILWRNRKRFTRQIIRDVSEDLSELAGERGPVSVQQQLQIMARMARTYPFL 253
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: A0A7S2LGP4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGP4_9STRA) HSP 1 Score: 138 bits (348), Expect = 9.330e-31 Identity = 101/273 (37.00%), Postives = 148/273 (54.21%), Query Frame = 1
Query: 916 NSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYY-LLKAEKSRDSTFKAMRTIVLAMERLLNLRHREGTWLQLTEDVPSGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGRMAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFL 1719
NSL+ ML+A++ D P MA DMS++ ++ E ++ +A K+ GDI RM VQFIK+EL+ A I ++ NELN ++ AT PA +L + + +Y LLK +S++ T+ + R ++L +ERLL +R L P DGI T AG R LR G S + + ++ + V +L+ DLG L++L+H+ R LI RRF +++ + EDLAEL GERG VSV QQL I RM R Y F+
Sbjct: 515 NSLKNMLKAWLDDQYPHTDEAWRANMANNMDMSLIEKKKEDNVLNALKSTFTGDIIRMGLIEVQFIKKELMHAMKGIDEVMDSNELNFQLAATAPALMLMYAAREFAHFFFYALLKLGQSKEETYASFRYLMLEIERLLVMRDSA-----LLVPPPLKDGI-TVAG----NNRTENLRRRGMSFDESEDLLEESD-------VVMLNTNDLGMLVLLVHECRTLILKNKRRFSDQEIRNVLEDLAELSGERGCVSVKQQLEIVSRMSRVYSFM 770
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: A0A835YHP7_9STRA (ATP synthase regulation protein NCA2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHP7_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.040e-30 Identity = 73/143 (51.05%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 913 TNSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYYLLKAEKSRDSTFKAMRTIVLAMERLLNLRH 1329
+ SL RMLEAFI++ P + DV + A DMS VSREYE SI +A +++V+GDI RM VQF+K +LL+ ++ L ENE N+R+MATVPA LA G++ AVRP+YY ++ KSR +T A+R +L MERLLNLR+
Sbjct: 274 SQSLRRMLEAFIRERHPGMAARDVDALVANMDMSTVSREYEKSIVTAMRSIVSGDIVRMLLIQVQFMKTKLLVLLNSMEDLMHENEFNMRVMATVPAVALAAGAYHAVRPLYYAVRRVKSRSATIIALRFTILGMERLLNLRN 416
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: A0A024U5R6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5R6_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.390e-30 Identity = 103/280 (36.79%), Postives = 149/280 (53.21%), Query Frame = 1
Query: 916 NSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAV----RPVYYLLKAEKSRD--STFKAMRTIVLAMERLLNLRHREGTWLQLTEDVPSGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGR-MAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFLL 1722
SL+RML FI DT P +PL + M A DMSVVS +YE + A +NLV GDI RM +QFIK+EL++A AI +L N+LN++MMAT+P F++A G + + R +Y + D S MR + +ERLLN+++ GT D + G+ +Q + LLR + V+ G G G + VR D+G L++L+ QL++L F + +ED+ +LVGE LVS QQLA+ RM S+ FL+
Sbjct: 340 ESLQRMLADFIHDTNPSMPLAQQQAMVANMDMSVVSLQYEKELPKAVRNLVTGDIVRMMLIQIQFIKKELMVAMKAIDELMDANQLNMQMMATLPMFVVAGGIYVVISKTSRLLYQFTSSAMYEDPKSVASQMRYALRDIERLLNMQNVNGTI-----DADALPGLNSQV---STSSMSPLLRAA-----------VAEGNGGGTTLGVR-----DMGYLVVLLDQLQQLFERNRGYFDEDEQKRFEEDVTDLVGEHMLVS--QQLAVIARMHHSHAFLV 593
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: D0NFE7_PHYIT (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0NFE7_PHYIT) HSP 1 Score: 135 bits (341), Expect = 3.540e-30 Identity = 100/290 (34.48%), Postives = 145/290 (50.00%), Query Frame = 1
Query: 892 ATAFFMYTNSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYYLLKAEKSRDSTFKA------MRTIVLAMERLLNLRHREGTWLQLTEDVPSGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGRMAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFLLPSR 1731
A A SL RML F+KDT P++P ++KR+ DMSVVS +YE + SA KNL+ GDI RM VQFIK+EL++A AI +L N+LN++MMATVP FL+ G ++ V ++++ S + + +R + +ERLLN ++R G G+ +A VL DLG L++L+HQLR L + F+ + +EDL +L+GE LVS QQLA+ QRM S+ FL ++
Sbjct: 371 AMALLDTKESLRRMLSDFVKDTNPKVPSAEMKRIMDEMDMSVVSLQYEKQLASAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQMMATVPTFLVFGGLYKLVTSAFHMVYKRMSDRLFYDSHEIAGFLRNNLRDIERLLNKQNR-------------GSGVSDEA---------------------------------------VLGVRDLGFLILLLHQLRDLFEAYRALFQEEEQERFEEDLDDLIGEGLLVS--QQLAVIQRMYHSHPFLYSTK 606
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Match: W2LMQ9_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LMQ9_PHYPR) HSP 1 Score: 131 bits (330), Expect = 1.520e-29 Identity = 98/290 (33.79%), Postives = 144/290 (49.66%), Query Frame = 1
Query: 892 ATAFFMYTNSLERMLEAFIKDTRPELPLTDVKRMAATKDMSVVSREYETSITSAWKNLVAGDIARM----VQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSFRAVRPVYYLLKAEKSRDSTFKA------MRTIVLAMERLLNLRHREGTWLQLTEDVPSGDGIGTQAGGGTARRRGSLLRPSGHSDNCTSQVIVSAGQGQGRMAVRVLDELDLGKLMMLIHQLRRLIRSGPRRFKRRDLTDCQEDLAELVGERGLVSVGQQLAITQRMQRSYHFLLPSR 1731
A A +SL RML F+KDT P++ ++ R+ DMSVVS +YE + +A KNL+ GDI RM VQFIK+EL++A AI +L N+LN++MMATVP FL+ G ++ V ++++ S + + +R + +ERLLN ++R G G+ +A VL DLG L++L+HQLR L S F+ + +EDL +L+GE LVS QQLA+ QRM S+ FL ++
Sbjct: 193 AKALLDTKDSLRRMLSDFVKDTNPKVSSAEMNRIMDEMDMSVVSLQYEKQLAAAVKNLMTGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNMQMMATVPTFLVFGGLYKLVTSAFHMIYKRMSDRLFYDSHEIAGFLRNNLRDIERLLNKQNR-------------GSGVSDEA---------------------------------------VLGVRDLGFLILLLHQLRDLFESYRALFQEEEQERFEEDLDDLIGEGLLVS--QQLAVIQRMYHSHPFLYSTK 428 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1124.2589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1124.2589.1 >prot_M-pyrifera_M_contig1124.2589.1 ID=prot_M-pyrifera_M_contig1124.2589.1|Name=mRNA_M-pyrifera_M_contig1124.2589.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=571bp MVTAKFAETQIRALVNAELEACLVLHESQDFWQQRVERSGGTLRNWIEMGback to top mRNA from alignment at M-pyrifera_M_contig1124:3446..16280- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1124.2589.1 ID=mRNA_M-pyrifera_M_contig1124.2589.1|Name=mRNA_M-pyrifera_M_contig1124.2589.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=12835bp|location=Sequence derived from alignment at M-pyrifera_M_contig1124:3446..16280- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1124:3446..16280- >mRNA_M-pyrifera_M_contig1124.2589.1 ID=mRNA_M-pyrifera_M_contig1124.2589.1|Name=mRNA_M-pyrifera_M_contig1124.2589.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3426bp|location=Sequence derived from alignment at M-pyrifera_M_contig1124:3446..16280- (Macrocystis pyrifera P11B4 male)back to top |