mRNA_M-pyrifera_M_contig11237.2584.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.930e-42 Identity = 74/165 (44.85%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 4 CAAFCEDSPFFGTGYGVECFCGRVSDVPDKLGNAS-CTFECAGDASQTCGGPNAITVYENSD---------FVPPPPEQGYLGCWADSKNNRAMDVVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIY 468
CA FC + ++GT YG EC+CG D LG ++ C+F C+GDA +TCGG NA++VY V P + YLGC+ DS+ +R V MT C + CA Y +YGTQYG+ECWCG+ Y T GES C +DC+GDA +TCGG A+S+Y
Sbjct: 4 CADFCAEYAYYGTQYGEECWCGNSGY--DTLGESTDCSFGCSGDAGETCGGFNAMSVYSTGSDPVETPTPVAVIEPTDPTYLGCYVDSQTDRIFPVTTASDVMTLAFCADFCAEYAYYGTQYGEECWCGNSG--YDTLGESTDCNYDCSGDADETCGGFNAMSVY 164
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: D7G4P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P0_ECTSI) HSP 1 Score: 145 bits (367), Expect = 1.120e-40 Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 1 VCAAFCEDSPFFGTGYGVECFCGRVSDVPDKLGNASCTFECAGDAS-QTCGGPNAITVYENSDFVPPPPEQGYLGCWADSKNNRAMDVVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIYEH 474
VC C + ++GT YG EC+C + + G A C +ECAG + CGG +A+++ ++ P YLGC++D +NR ++V MT ++C C++YP+YGTQY ECWCG T Y TNG S+ C CAGDAS+ CGGP+++S+Y++
Sbjct: 5 VCEGLCANYAYYGTQYGTECWCDEGTADYAQNGLAVCDYECAGSTDGEFCGGFDAMSIRQHEVDTNP---DNYLGCFSDPADNRIFELVTSSDDMTEEVCSGHCSAYPYYGTQYSTECWCGDGETAYDTNGASEECVMPCAGDASEICGGPYSMSVYQN 160
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 142 bits (358), Expect = 5.590e-39 Identity = 73/166 (43.98%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 1 VCAAFCEDSPFFGTGYGVECFCGRV-SDVPDKLGNASCTFECAGDASQTCGGPNAITVYENSDFVPPPPEQGY--------LGCWADSKNNRAMD-VVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIY 468
+C C S +F T YG EC+CG V +D + CT+ C+GDA QTCGG +A VY +D P LGC+ D + R MD +V DSSMT +LC+ C ++ TQYG+ECWCGSD DY +GES CT+ C+GDA Q CGG A ++Y
Sbjct: 15 LCEQTCVGSIYFATQYGRECWCGSVGADYTVHGESTDCTYACSGDADQTCGGFDAANVYRYTDDSTPSXXXXXTEAAPFVALGCYGDDREARIMDDLVLSDSSMTTELCELTCLGSTYFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVY 180
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 145 bits (365), Expect = 4.320e-38 Identity = 76/167 (45.51%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 1 VCAAFCEDSPFFGTGYGVECFCGRV-SDVPDKLGNASCTFECAGDASQTCGGPNAITVY----ENSDFVPPPP---EQG--YLGCWADSKNNRAMD-VVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIY 468
+C C + +F T YG EC+CG +D +A CT+ CAGDA +TCGG +A VY E++ P P E G LGC+ D + NR MD + D SMT +LC++ C F+ TQYG+ECWCGS DY +GES CT+ CAGDA QTCGG A ++Y
Sbjct: 247 LCEQTCVGNTYFATQYGRECWCGSAGADYASHGESADCTYACAGDADETCGGFDAANVYLYTGESTPSPTPSPTADESGPLSLGCYEDDRENRIMDDLALSDFSMTTELCEQTCLGNTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVY 413
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 139 bits (350), Expect = 3.180e-35 Identity = 72/167 (43.11%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 1 VCAAFCEDSPFFGTGYGVECFCGRV-SDVPDKLGNASCTFECAGDASQTCGGPNAITVY----ENSDFVPPPPEQG-----YLGCWADSKNNRAMD-VVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIY 468
+C C + +F T YG EC+CG +D +A CT+ CAGDA QTCGG +A VY E++ P P LGC+ D + +R MD + D++MT +LC++ C ++ TQYG+ECWCGS DY+ +GES CT+ CAGDA QTCGG A ++Y
Sbjct: 662 LCEQTCLGNIYFATQYGQECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYKGESTPSPTPSPTADDASPLSLGCYEDDREDRIMDDLALSDNAMTTELCEQTCLGNTYFATQYGRECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVY 828
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 129 bits (323), Expect = 4.040e-32 Identity = 62/140 (44.29%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 55 ECFCGRVSDVPDKLGNASCTFECAGDASQTCGGPNAITVYENSDFVPPPPEQGYLGCWADSKNNRAMDVVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIYEH 474
+C+CG D D G C C+GD+S+TCGG A++VYEN D + GYLGC++D ++R D+V MT+++C C +Y +YGTQY +CWCG D+ DY NG + C C+GDAS+ CGG +A+S+YE+
Sbjct: 30 QCWCGDNVDY-DANGEGVCDMACSGDSSETCGGFYAMSVYENPD------DSGYLGCYSDPADSRIFDLVATADDMTSEICLGNCGAYQYYGTQYSTQCWCG-DNADYDANGAGE-CDMACSGDASEICGGFYAMSVYEN 160
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: A0A3M0W0T4_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 134920 TaxID=2249417 RepID=A0A3M0W0T4_9EURO) HSP 1 Score: 125 bits (315), Expect = 1.660e-30 Identity = 65/169 (38.46%), Postives = 94/169 (55.62%), Query Frame = 1
Query: 4 CAAFCEDSPFFGTGYGVECFCGRV--SDVPDKLGNASCTFECAGDASQTCGGPNAITVYENSDFVPP--PPEQGYL--GCWADSKNNRAMDVVQKDSS-MTNDLCDEICAS------YPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIYE 471
CAA C FFGT Y ECFCG + + +A C C+GDAS+ CGGP+ +++YEN+ + P P GY+ GC+ DS NR++ + DS+ MT LC + C S Y + GT+Y EC+C + D C+ C+G++SQ CGGP +S+Y+
Sbjct: 888 CAASCSTYAFFGTEYSGECFCGNTLAAGSTNASSSAECNMACSGDASEICGGPSRLSLYENTAYSTPQSPSFSGYIYQGCYTDSVANRSLAAARTDSNAMTIQLCAQFCLSAQADDEYTYMGTEYAAECYCANALADTSVLASDSECSMTCSGNSSQACGGPNRLSLYQ 1056
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: A0A6A6P5T9_9PEZI (Uncharacterized protein n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P5T9_9PEZI) HSP 1 Score: 124 bits (310), Expect = 7.750e-30 Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 1 VCAAFCEDSPFFGTGYGVECFCG-RVSDVPDKLGNASCTFECAGDASQTCGGPNAITVYENSDFVPPP--------PEQGYLGCWADSKNNRAMDVVQK-DSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIYE 471
+C++FC + +FG Y EC+CG R + ++ + C C+GDA+ CGGPN +T+++++ PP P Y+GC DS R +D + D+ +T ++C + C ++GT+YGQEC+CG ++ ++ C+F CAGD Q CG +S+YE
Sbjct: 844 MCSSFCGGNVYFGVEYAGECYCGDRFTGSTEEADESDCNMACSGDANANCGGPNRLTLFKSTSNEEPPAGPANAEIPGYSYVGCKTDSVGARVLDAMTLFDAQLTVEMCADFCDGSTYFGTEYGQECYCGDGFSNPTSDAPETDCSFACAGDEQQLCGAGNRLSLYE 1010
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: A0A0F4ZFK6_9PEZI (Uncharacterized protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZFK6_9PEZI) HSP 1 Score: 122 bits (307), Expect = 1.430e-29 Identity = 58/162 (35.80%), Postives = 89/162 (54.94%), Query Frame = 1
Query: 1 VCAAFCEDSPFFGTGYGVECFCGRVS--DVPDKLGNASCTFECAGDASQTCGGPNAITVYENSDFVPPPPEQ----GYLGCWADSKNNRAMDVVQKDSSMTNDLCDEICASYPFYGTQYGQECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIY 468
+CAA C S +FG YG EC+CG + P + C+ C+GDA+ TCGG I +Y D++ P P YLGC+ ++ + ++MT ++C C Y ++GT+YG ECWCG++ D + ++ C+ CAGD Q CGGP +++Y
Sbjct: 90 LCAAACAKSKYFGLEYGDECWCGNTIAYNAPLAPSASECSMPCSGDANATCGGSQRIQIYLTPDYIAPAPATISGTPYLGCFQEAATRVLPNRALAQANMTAEICLANCVGYLYFGTEYGNECWCGNNKPDLLA--DATDCSMVCAGDDEQLCGGPDRLTVY 249
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Match: A0A6H5JX48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX48_9PHAE) HSP 1 Score: 119 bits (298), Expect = 3.050e-28 Identity = 66/169 (39.05%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 55 ECFCGRV-SDVPDKLGNASCTFECAGDASQTCGGPNAITVYENSDF-----VPPPPEQGY---LGCWADSKNNRAMD-VVQKDSSMTNDLCDEICASYPFYGTQYGQ-------------------ECWCGSDSTDYMTNGESDSCTFDCAGDASQTCGGPFAISIYEH 474
EC+CG +D + CT+ CAGDA Q CGG +A VY +D P P E G LGC+ D + +R MD +V DSSMT +LC+ C ++ TQYGQ EC+CG +STD + +GES +C ++C GD+ Q CGG +A+S+Y +
Sbjct: 604 ECWCGSAGADYALHGESTDCTYPCAGDADQMCGGFDAANVYRYTDGSTPSPTPSPTEAGSHLALGCYEDDREDRIMDELVLSDSSMTTELCELTCVGSTYFATQYGQXXXXXXXXXXXXXXXXXXTECFCGGESTDLLQHGESTACNYECPGDSDQVCGGFYAMSVYSY 772 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11237.2584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11237.2584.1 >prot_M-pyrifera_M_contig11237.2584.1 ID=prot_M-pyrifera_M_contig11237.2584.1|Name=mRNA_M-pyrifera_M_contig11237.2584.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp VCAAFCEDSPFFGTGYGVECFCGRVSDVPDKLGNASCTFECAGDASQTCGback to top mRNA from alignment at M-pyrifera_M_contig11237:540..2253- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11237.2584.1 ID=mRNA_M-pyrifera_M_contig11237.2584.1|Name=mRNA_M-pyrifera_M_contig11237.2584.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1714bp|location=Sequence derived from alignment at M-pyrifera_M_contig11237:540..2253- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11237:540..2253- >mRNA_M-pyrifera_M_contig11237.2584.1 ID=mRNA_M-pyrifera_M_contig11237.2584.1|Name=mRNA_M-pyrifera_M_contig11237.2584.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig11237:540..2253- (Macrocystis pyrifera P11B4 male)back to top |