mRNA_M-pyrifera_M_contig1123.2577.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1123.2577.1
Unique NamemRNA_M-pyrifera_M_contig1123.2577.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 595 bits (1533), Expect = 2.960e-201
Identity = 328/534 (61.42%), Postives = 391/534 (73.22%), Query Frame = 1
Query:   16 STINISTGERDEFTPAFGGGGVAGAAFIKDDPKPTLDEMGPSSSTDNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDR------------QREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSM 1581
            ST  +ST ER E      G          D+P P   E   SS+   R S   VG+GQAV  AA ELA  C +PGVSE  T V+ILVNLV D+RD  +G ++ LR+CRSIVM+L RA KV G G +TTGK  R L++DVH+AIFDL+EL KTYQSKN+LS++L S+LF+RRQDE+ AVV+RAI+ LQLGL VQVG DV A           M LYKGS+ E QS+ LAD R  RR+RKL ++EI E+ VTIT+E+LG+GGFGEVYLADYNGRNAA KVL I  DLG   END             +RE  QR+AFL ELDAMIRLRSP+TVNVYGAVT++ DR+VLVMELLSGGDLRT+L N +QPLPE QSR+IIGDICAGMAFLHSK+ VHGDLKSANVLLDG+GRAKIGDFGTSRW++HT STGLAT+TT+SS  TQMSLAWSAPEVL   GST ASDVYSFGIVVWEV+S ELPWA  + P++I +  VL  +RP   + APT++ ++A+ACW   P  R  F  +M+ M
Sbjct:  426 STAVVSTSERAELA----GISTENTGRFADEPMPASGEREASSTAGRRGSFGDVGVGQAVMVAAQELAHRCQVPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAGNGENTTGKVARTLIDDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAIVRLQLGLQVQVGQDVKA----------GMDLYKGSIAEVQSESLADARSTRRRRKLDQVEIPEEHVTITNEVLGRGGFGEVYLADYNGRNAAAKVLLIARDLGTLSENDALESPLAGRSNTTKREDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLATYTTRSSPGTQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREI-LSAVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGM 944          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 3.880e-191
Identity = 320/549 (58.29%), Postives = 404/549 (73.59%), Query Frame = 1
Query:    1 LIVTTSTINISTGERDEFTPAFGGGGVAGAAFIKDDPKPTLDEMGP---SSSTDNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTI-TDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRG------------ENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSMKANRWN 1599
            L  T ST+++ST ER E    F     + A+    D +   + +G    SS+T  R S   +GL +AV  AA  LA +C IPGVSE A+ V+ LV LV+D+RD K+G +++LR+CRSIV +L+RA+KV G+GG+TT   +R L+++VH AI DL+EL KTYQS NRLS++L S+ F+ RQ+++ A ++RA+  LQ GL VQVG DV  VK  I  V+       GS+ E  +  LA  R ARRQRKL ++EI ED V I +DELLGKGGFGEV+LA+YN RNAA KVLHI +DLG+ G            +++ +RE+ QRKAFL EL+AMIRLRSP+TV VYGA+T+  DRLVLVMELL+GGDLR +L N +QPLPE Q R+IIGDICAGM FLHSKE VHGDLKSANVLLDGAGRAKIGDFGTSRW+ HT STGLAT+T K+ +NTQMSLAWSAPEVL  +GSTYASDVYSFGIV WEVLSRELPWA+V HP+++YIRVVLN+LRP++P  AP +IA + RACW   P  RP  S +M+ +++N W+
Sbjct:  670 LTATVSTVDMSTAERAELGQ-FDEKQQSAASVASVDGESAPEVLGEGIASSATGRRGSRGGIGLREAVMQAAENLAYHCQIPGVSEAASVVSTLVMLVSDSRDIKSGGDSNLRQCRSIVRILERASKVAGRGGETTTAEQRDLIDEVHYAIEDLVELIKTYQSMNRLSKVLMSTSFKWRQNDLEAAIDRALSRLQFGLQVQVGDDVRGVKEGIDVVQ-------GSIVEANAASLAKARSARRQRKLDQVEIPEDQVMIFSDELLGKGGFGEVFLAEYNRRNAAAKVLHIAHDLGKPGGQEDLLEARVDGQSNPEREKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNSTGLATYT-KAGQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIESNGWS 1209          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 1.270e-188
Identity = 316/567 (55.73%), Postives = 385/567 (67.90%), Query Frame = 1
Query:   10 TTSTINISTGERDEFT---------------------PAFGG-GGVAGAAFIKDDPKPTLDEMGPSSSTDNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYK----------------GSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSMKANRW 1596
            T ST N+ST ER E                       PA G  GGV G        + T      SS+ D + S + +GLG AV  AA ELAR+C +PG+SE A  + I+ NL  DNR+     ++ LR+CRSIVM L+RA KV+GKGGDTTG+  R L+EDVHDAIFDL+EL KT+QSKN+LS+L  S+LF+RR+DE+ AVV+RAI  LQLGL +Q+G D+ +VK  + +                          + E   S+ +A+ R  RR+RKL ++EI ED + IT +LLGKGGFGEVYLADYNG NAA KVL+I +DLG   EN +QRE  QRK FL EL+AMIRLRSP TVNVYGAVT++ DR+VLVMELL  GDL T+L     PLPE +SRQIIGDICAGMAFLH K  VHGDLKSANVLLDG GRAKIGDFGTSRW++HT STGLAT+TTK++++TQMSLAWSAPEVL   GSTY SDVYSFGIVVWEVLSRELPWA  T P+DI +  VL  +RP     AP +I D+A+ACW   P +R  FS +++ M A  W
Sbjct:  515 THSTANVSTHERAELAVFQQRQDVLEAAPVASGSRPVPASGSSGGVGGVDVGVGGARET------SSAADRQNSAEDLGLGHAVLGAAQELARHCQVPGISEAAAVLCIMANLFTDNRENDRENDSRLRQCRSIVMALKRAEKVVGKGGDTTGEVARVLIEDVHDAIFDLVELIKTFQSKNKLSKLFLSTLFKRRKDELDAVVDRAITRLQLGLQLQMGHDMGSVKDSMKSXXXXXXXXXXXXXXXXXXXXXXXXXSNAESTTSESVAEARSIRRKRKLDQVEIPEDQLFITTDLLGKGGFGEVYLADYNGHNAAAKVLYIAHDLGALDENQKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTNPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVLSRELPWANKTRPRDI-LSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGW 1074          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI)

HSP 1 Score: 563 bits (1451), Expect = 1.540e-188
Identity = 307/532 (57.71%), Postives = 386/532 (72.56%), Query Frame = 1
Query:   10 TTSTINISTGERDEFTPAFGGGGVAGAAFIKDDPKP---TLDEMGPSSSTDNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSMKANRW 1596
            TTST N+ST ERDE +       V  AA +  + KP   +    G SS+ D++ S D +GLG+AV +AA ELA +C IPGVSE ATAV ++ NLV D RD    +E+ LR+C ++VM L+RAAKV  KGGDT G+  R ++EDVH AIFDL++L KTYQSKN+LS+L  S+LF+RRQ+E+ A+V++A++ LQLGL +QVG DV AVK    +VK  + LY+ S+ E  S+ +A+ R+ +RQRKL ++EI  + ++IT+ELLGKGGFGEVYLADYNG NAA KVLHI    G   E  +QRE  Q +AFL EL+AMIRLRS  TVNVYGAVT++ DR+VLVMELL+GGDL T+L   ++ LP  QSRQII DIC GMAFLH K  VHGDLKSANVLLDG GRAKI DFGTSRWT+ T STGLAT+TT+SS+ T MS+AWSAPEVL   GS+Y SDVYSFGIVVWEV+ RELPWA  T P+DI +  VL  +RP     AP +I  +A+ACW   P +R  F  ++  +KA  W
Sbjct:  452 TTSTANLSTAERDELSQFHQRERVEDAAPVSGELKPEEASSGGPGASSAADDQNSAD-IGLGRAVFEAAQELAHHCQIPGVSEAATAVCMMANLVTDGRDNARASESRLRQCSTVVMALKRAAKVADKGGDTIGEVARGMIEDVHGAIFDLVQLIKTYQSKNKLSRLFMSTLFKRRQEELNAIVDQAMMRLQLGLQLQVGQDVGAVKDKFDSVKEGIDLYQLSLSEAASESVAEARRVKRQRKLDQVEIPAEYLSITNELLGKGGFGEVYLADYNGHNAAAKVLHIA-QTGALDETQKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPGQQSRQIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQTTLMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVICRELPWAKKTRPRDI-LTAVLRGVRPSFHVDAPADIVYIAKACWCGEPKERTTFRAILMGIKAKDW 980          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI)

HSP 1 Score: 566 bits (1458), Expect = 1.670e-187
Identity = 308/532 (57.89%), Postives = 388/532 (72.93%), Query Frame = 1
Query:   10 TTSTINISTGERDEFTPAFGGGGVAGAAFIKDDPKP---TLDEMGPSSSTDNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSMKANRW 1596
            TTST N+ST ERDE +       VA AA +  + KP   +    G SS+ D++ S D +GLG+AV  AA EL  +C IPGVSE ATAV ++  LV D RD    +E+ LR+C ++VM L+RAAKV  KGGDT G+  R ++EDVH AIFDL++L KTYQSKN+LS+L  S+LF+RRQ+E+ AVV++AI+ LQLGL +QVG DV AVK  + +VK  + LY+ S+ E  S+ +A+ R+ +RQRKL ++EI  + ++ITDELLGKGGFGEVYLADYNG NAA KVLHI   +G   E  +QRE  Q +AFL EL+AMIRLRS  TVNVYGAVT++ DR+VLVMELL+GGDL T+L   ++ LP  QSR+II DIC GMAFLH K  VHGDLKSANVLLDG GRAKI DFGTSRWT+ T STGLAT+TT+SS+ TQMS+AWSAPEVL   GS+Y SDVYSFGIVVWEV+SRE+PWA  T  +DI +  VL  +RP     AP ++ D+A ACW   P +R  F  +++ +KA  W
Sbjct:  630 TTSTANLSTAERDELSQFHQRERVADAAPVSGELKPEEASSGGPGASSAADDQNSAD-IGLGRAVLAAAQELVHHCQIPGVSEAATAVCMMATLVTDGRDNARASESRLRQCSTVVMALKRAAKVADKGGDTIGEVARGMIEDVHGAIFDLVQLIKTYQSKNKLSRLFMSTLFKRRQEELNAVVDQAIMRLQLGLQLQVGQDVGAVKDKLDSVKEGIDLYQLSLSEAASESVAEDRRVKRQRKLDQVEIPAEYLSITDELLGKGGFGEVYLADYNGHNAAAKVLHIAR-MGALDETQKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPGQQSRRIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQTTQMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVISREVPWAKKTRSRDI-LTAVLRGVRPSFHVDAPADVVDIANACWCGEPKERTTFRAILQGIKAKDW 1158          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE)

HSP 1 Score: 557 bits (1436), Expect = 2.460e-187
Identity = 309/543 (56.91%), Postives = 385/543 (70.90%), Query Frame = 1
Query:    1 LIVTTSTINISTGERDEFTPAFGGGGV-AGAAFIKDDPKPTLDE---MGPSSSTDNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYD-------MHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSMKANRW 1596
            +  TTST N+ST ERDE +           AA +  +PKP        G SS+ D++ S D +GLG+ V  AA ELA +C IPGVSE ATAV ++ NLV D+RD    +++ LR+C ++VM L+RAAKV  KGGDT G   R ++EDVH AIFDL++L KTYQSK +LS+L  S+LF+RRQ+E+ AVV++AI+ LQLGL +QVG DV AVK                M LY+ S+ E  S+ +A  R+ +RQRKL ++EI  + ++ITDELLGKGGFGEVYLADYNG NAA KVL+I +D+G   EN +QRE  +R+AFL EL+AMIRLRS  TVNV+GAVT++ DR+VLVMELL+GGDL T+L   ++ LPE QSR II DIC GMAFLHSK  VHGDLKSANVLLD  GRAKI DFGTSRWT+   STGL T+TTKSS+ TQMS+AWSAPEVL    S+Y SDVYSFGIVVWEVLSRELPWA  T P ++ +  VL  +RP    GAP +I D+A+ACW   P +R  F  ++  MKAN W
Sbjct:  356 ITATTSTANLSTAERDELSQFHQRERERVVAAPVSGEPKPEEASGGGTGASSAADHQNSAD-IGLGRVVLAAAQELAHHCQIPGVSEAATAVCMMANLVTDSRDNARASQSRLRQCSTVVMALKRAAKVADKGGDTIGSVARGMIEDVHGAIFDLVQLIKTYQSKTKLSRLFMSTLFKRRQEELDAVVDQAIMRLQLGLQLQVGQDVGAVKDXXXXXXXXXXXXXXGMDLYQLSLSEAASESVAKARRIKRQRKLDRVEIPAEYLSITDELLGKGGFGEVYLADYNGHNAAAKVLYIAHDVGALDENQKQRETRERRAFLRELEAMIRLRSLNTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGLTTYTTKSSQTTQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEV-LTAVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAILDGMKANGW 896          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 559 bits (1440), Expect = 1.240e-185
Identity = 316/528 (59.85%), Postives = 382/528 (72.35%), Query Frame = 1
Query:    4 IVTTSTINISTGERDEFTPAFGGGGVAGAAFIKDDPKPTLDEMGPSSSTDN-RAST-DCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSM 1581
            + TTS+     GER + T         G     DD    +   G +S TD+ RAS    VG GQAV   A ELA +C +PGVSEVAT V++LVNLV D+ D   G++  LR+CRSI+++L RA KV G G +TTG+  R L+EDVH+AIFDL+EL KTYQSKN+LS++L S+LF+RRQDE+ AVV+RA++ LQLGLH+QVG DVSA+K         M  YKGS+ E QS+ LAD R+ RRQRKL ++EI E  +TIT+E+LGKGGFGEVYLADYNGRNAA K  H  ND              QR+AFL ELDAMIRLRSP+TVNVYGAVT+  D +VLVMELLSGGDLRT+L   EQPLP+ QSR+IIGDICAGMAFLH K+ VHGDLKSANVLLDG+GRAKIGDFGTSRW++HT STGLAT+TT +  +TQMSLAWSAPEVL   GSTYASDVYSFGIVVWEV+S ELPWA  T P++I +  VL   RP     AP +I ++A+ACWV  P  R  F  +++ M
Sbjct:  584 LTTTSSTTTLPGERADTTAV----SRKGTPHFADD-HILVSGKGETSQTDSHRASVVTSVGGGQAVLLLAQELAHHCQVPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAGNGENTTGEVTRMLIEDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAMVRLQLGLHMQVGQDVSAIKTG-------MDQYKGSIAEAQSESLADARRTRRQRKLDQVEIPEGHLTITNEVLGKGGFGEVYLADYNGRNAAAK--HHQNDS-------------QRRAFLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLATYTT-TKPSTQMSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREI-LSAVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGM 1082          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE)

HSP 1 Score: 553 bits (1425), Expect = 4.380e-183
Identity = 298/512 (58.20%), Postives = 366/512 (71.48%), Query Frame = 1
Query:  151 DNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVK--------------YDMHLYK----------------GSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTMMKSMKANRW 1596
            D   S+D +GLG AV  AA ELA +C +PG+SE A  + I+ NL  DNR+     ++ L++CRSIVM L+RA KV+GKG DTTG+  R L+EDVHDAIFDL+EL KT+QSKN+LS+LL S+LF+RRQDE+ AVV+RAI  LQL    Q+G D+ +VK  + +++                M+LY+                 + E   S+ +A+ R  RRQRKL ++EI ED + IT +LLGKGGFGEVYLADYNG NAA KVL+I +DLG   EN +QRE  QRK FL EL+AMIRLRSP TVNVYGAVT++ DR+VLVMELL  GDL T+L    +PLPE +SRQIIGDICAGMAFLH K  VHGDLKSANVLLDG GRAKIGDFGTSRW++HT STGLAT+TTK++++TQMSLAWSAPEVL   GSTY SDVYSFGIVVWEV SRELPWA  T P+DI +  VL  +RP     AP +I D+A+ACW   P +R  FS +++ M A  W
Sbjct:  593 DRPNSSDDLGLGHAVLGAAQELAHHCQVPGISEAAGVLCIMANLFTDNRENDRANDSRLKQCRSIVMALKRAEKVVGKGSDTTGEVARVLIEDVHDAIFDLVELIKTFQSKNKLSKLLLSTLFKRRQDELDAVVDRAITRLQL----QMGHDMGSVKDSMKSMENXXXXXXXXXXXXXXGMNLYRQASQTISVSVPGCVEGSNAESTTSESVAEARSIRRQRKLDQVEIPEDQLFITTDLLGKGGFGEVYLADYNGHNAAAKVLYIAHDLGALDENQKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTKPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVFSRELPWANKTRPRDI-LSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGW 1099          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE)

HSP 1 Score: 548 bits (1413), Expect = 4.900e-182
Identity = 291/481 (60.50%), Postives = 364/481 (75.68%), Query Frame = 1
Query:  175 VGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRR---------GENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAK------IGDFGTSRWTEHT-MSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTM 1569
            V  GQAV  AA ELA +C IPGVSE AT V+ILV+LV D+RD+ +  + +++RCRSIVMML+RAAKVLG GGDT  + ERAL+E+VHDA+ DL++L KTYQ+KN+LS++L S+LF+RRQ+E+ AVV++AIL L LGL VQVG DV+            + L+K S  E +++ LA+ R+ARRQRKL ++EI +D V IT+E+LG+GGFGEVYLADYNG NAA KV +I +  GRR         G+ D  RE++QRKAFL ELDAMIRLR P+TVNVYGA+T++ DRL+LV+ELL GGDLRTML N EQPLPE QSRQII DICAGMAFLHSK  VHGDLKSAN+LLD  GRAK      IGDFGTSRWT++T  STGLAT+TT    +T +S AW+APEVL    ++ ASDVYSFGIVVWEVLSR+LPWA    P+DIY+RVV++  RP +P  AP +IA++   CW + P +RP F  +
Sbjct:  569 VEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSMSRGDGAVKRCRSIVMMLERAAKVLGNGGDTNSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAE----------GLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGRRDDVLNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKETTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPAIPADAPVDIAEILLGCWAQEPTERPTFQAL 1039          
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 2.140e-178
Identity = 286/466 (61.37%), Postives = 355/466 (76.18%), Query Frame = 1
Query:  175 VGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRDTKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFDLLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVGSDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEISEDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQREQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLRTMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAGRAKIGDFGTSRWTEHT-MSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGSTYASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPTEIADVARACWVERPADRPAFSTM 1569
            V  GQAV  AA ELA +C IPGVSE AT V+ILV+LV D+RD+ +  + +++RCRSIVMML+RAAKVLGKGGDT  + ERAL+E+VHDA+ DL++L KTYQ+KN+LS++L S+LF+RRQ+E+ AVV++AIL L LGL VQVG DV+            + L+K S  E +++ LA+ R+ARRQRKL ++EI +D V IT+E+LG+GGFGEVYLADYNG NAA KV                 ++IQRKAFL ELDAMIRLR P+TVNVYGA+T++ DRL+LV+ELL GGDLRTML N EQPLPE QSRQII DICAGMAFLHSK  VHGDLKSAN+LLD  GRAKIGDFGTSRWT++T  STGLAT+TT    +T +S AW+APEVL    ++ ASDVYSFGIVVWEVLSR+LPWA    P+DIY+RVV++  RP +P  AP +IAD+   CW + P +RP F  +
Sbjct:  712 VEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSLSRGDLAVKRCRSIVMMLERAAKVLGKGGDTNSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAE----------GLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVG----------------KKIQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQAL 1151          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1123.2577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRE9_ECTSI2.960e-20161.42Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
A0A6H5KY76_9PHAE3.880e-19158.29Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7X7_ECTSI1.270e-18855.73ATP binding / amino acid binding / protein kinase/... [more]
D7FL57_ECTSI1.540e-18857.71Hypothetical leucine rich repeat kinase n=1 Tax=Ec... [more]
D7G7F2_ECTSI1.670e-18757.89Tyrosine kinase specific for activated (GTP-bound)... [more]
A0A6H5JSI8_9PHAE2.460e-18756.91Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LHV1_ECTSI1.240e-18559.85Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KF25_9PHAE4.380e-18358.20Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KA37_9PHAE4.900e-18260.50Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FN19_ECTSI2.140e-17861.37Putative CTR1-like protein kinase/ leucine rich re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1123contigM-pyrifera_M_contig1123:22719..28759 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score604.0
Seed ortholog evalue6.9e-170
Seed eggNOG ortholog2880.D8LRF5
Preferred nameRIPK4
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons8
Model size1602
Cds size1602
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1123.2577.1prot_M-pyrifera_M_contig1123.2577.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1123 22719..28759 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815636.83476-CDS-M-pyrifera_M_contig1123:22718..229941622815636.83476-CDS-M-pyrifera_M_contig1123:22718..22994Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 22719..22994 -
1692277498.7932394-CDS-M-pyrifera_M_contig1123:22718..229941692277498.7932394-CDS-M-pyrifera_M_contig1123:22718..22994Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 22719..22994 -
1622815636.8471284-CDS-M-pyrifera_M_contig1123:23984..241011622815636.8471284-CDS-M-pyrifera_M_contig1123:23984..24101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 23985..24101 -
1692277498.809612-CDS-M-pyrifera_M_contig1123:23984..241011692277498.809612-CDS-M-pyrifera_M_contig1123:23984..24101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 23985..24101 -
1622815636.8591952-CDS-M-pyrifera_M_contig1123:24482..248001622815636.8591952-CDS-M-pyrifera_M_contig1123:24482..24800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 24483..24800 -
1692277498.821621-CDS-M-pyrifera_M_contig1123:24482..248001692277498.821621-CDS-M-pyrifera_M_contig1123:24482..24800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 24483..24800 -
1622815636.873108-CDS-M-pyrifera_M_contig1123:24833..248781622815636.873108-CDS-M-pyrifera_M_contig1123:24833..24878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 24834..24878 -
1692277498.8309462-CDS-M-pyrifera_M_contig1123:24833..248781692277498.8309462-CDS-M-pyrifera_M_contig1123:24833..24878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 24834..24878 -
1622815636.8886955-CDS-M-pyrifera_M_contig1123:26622..268051622815636.8886955-CDS-M-pyrifera_M_contig1123:26622..26805Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 26623..26805 -
1692277498.8405728-CDS-M-pyrifera_M_contig1123:26622..268051692277498.8405728-CDS-M-pyrifera_M_contig1123:26622..26805Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 26623..26805 -
1622815636.9056706-CDS-M-pyrifera_M_contig1123:27107..271941622815636.9056706-CDS-M-pyrifera_M_contig1123:27107..27194Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 27108..27194 -
1692277498.8500533-CDS-M-pyrifera_M_contig1123:27107..271941692277498.8500533-CDS-M-pyrifera_M_contig1123:27107..27194Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 27108..27194 -
1622815636.9193172-CDS-M-pyrifera_M_contig1123:27445..276371622815636.9193172-CDS-M-pyrifera_M_contig1123:27445..27637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 27446..27637 -
1692277498.8592482-CDS-M-pyrifera_M_contig1123:27445..276371692277498.8592482-CDS-M-pyrifera_M_contig1123:27445..27637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 27446..27637 -
1622815636.9312034-CDS-M-pyrifera_M_contig1123:28375..287591622815636.9312034-CDS-M-pyrifera_M_contig1123:28375..28759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 28376..28759 -
1692277498.868035-CDS-M-pyrifera_M_contig1123:28375..287591692277498.868035-CDS-M-pyrifera_M_contig1123:28375..28759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1123 28376..28759 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1123.2577.1

>prot_M-pyrifera_M_contig1123.2577.1 ID=prot_M-pyrifera_M_contig1123.2577.1|Name=mRNA_M-pyrifera_M_contig1123.2577.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=534bp
LIVTTSTINISTGERDEFTPAFGGGGVAGAAFIKDDPKPTLDEMGPSSST
DNRASTDCVGLGQAVGDAAHELARNCHIPGVSEVATAVAILVNLVNDNRD
TKNGTEASLRRCRSIVMMLQRAAKVLGKGGDTTGKTERALMEDVHDAIFD
LLELTKTYQSKNRLSQLLTSSLFRRRQDEMGAVVERAILSLQLGLHVQVG
SDVSAVKHDIGAVKYDMHLYKGSVEEDQSKYLADTRKARRQRKLHKLEIS
EDDVTITDELLGKGGFGEVYLADYNGRNAAVKVLHINNDLGRRGENDRQR
EQIQRKAFLLELDAMIRLRSPYTVNVYGAVTAVQDRLVLVMELLSGGDLR
TMLSNCEQPLPEHQSRQIIGDICAGMAFLHSKEAVHGDLKSANVLLDGAG
RAKIGDFGTSRWTEHTMSTGLATFTTKSSKNTQMSLAWSAPEVLHVAGST
YASDVYSFGIVVWEVLSRELPWATVTHPKDIYIRVVLNDLRPDMPEGAPT
EIADVARACWVERPADRPAFSTMMKSMKANRWN*
back to top

mRNA from alignment at M-pyrifera_M_contig1123:22719..28759-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1123.2577.1 ID=mRNA_M-pyrifera_M_contig1123.2577.1|Name=mRNA_M-pyrifera_M_contig1123.2577.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6041bp|location=Sequence derived from alignment at M-pyrifera_M_contig1123:22719..28759- (Macrocystis pyrifera P11B4 male)
TTGATTGTTACAACCTCAACCATCAACATATCAACGGGAGAACGGGACGA ATTTACTCCAGCATTTGGCGGAGGGGGTGTGGCGGGTGCGGCGTTTATCA AGGACGACCCCAAGCCAACATTGGACGAAATGGGACCTTCATCATCCACC GATAACCGGGCGTCGACGGATTGCGTCGGGCTTGGCCAGGCCGTGGGAGA TGCGGCGCATGAGCTGGCGCGTAATTGTCACATTCCCGGCGTGAGCGAAG TGGCGACAGCGGTTGCTATTCTTGTTAACCTGGTCAATGATAACCGGGAC ACTAAGAATGGAACTGAGGCGAGCCTCCGACGGTGCCGATCGATCGTCAT GATGCTTCAGCGGGCGGCGAAGGTGCTTGGCAAGGTGAGTGATCGAGATT TGATGTATGCCTCCATTACGCATTTGTACCGGGTACGTCATGTGCTTTCA TGTTGTTCGGGTTAAAACGATACGTTCCACGTGCACCTGCACTGTCCTAT CGTTAGTTTTACGTAGACTTTCGGGATGCGCTCGTATTGGCTCAGGCATA CACGAATGCCGTCCACACAACACCACGTCTGTGAAACGCATTCGCGAATG AGTTTGTCTGAGGCTCCTCACACGACATGGAGTTCTCGAAACTCCTCCAC GGATAGGCCTATGGGAAAAGCTACGTATCTATGTACCTTGAATTGGATTT CCTGCTTGTTGGCCAGTTCCTCAGATGAGTTCCTCGAGTCGAACAATATA GGGCCCAGATGCAACCCCTCTACCGCGATATCGATCCAACAGATGTATCC TTGTTCGTATCTTCTATACGGTAACACCAAGAGTGAATAAAGCTTGAGGC ATTGCACACGGCAGACATATCATGGTAGATACGGTTTAGATTCTGTCCAT ACTGCCACGGAAAAGTCAGCAGCCGCATCACACGGATCCCTCTGGTAAAA TAAATGTAAATTTGCCAGCGCTTTGTCAAGAAGGCCTCAGCTAACGAACA TGATGTGGTCCGTACGGATGATGTCAATCAGGGAAAAAGCTACTCCGAAA TAGCTATGTAGTGAAATGACGAGTTTGATGTGTCCGGCGTGCAAAACGTT ACACGTTTTGAATGCAAGCCAGGGCGGCGACACCACCGGAAAGACAGAGC GAGCTTTGATGGAAGATGTGCACGACGCAATATTTGATCTACTGGAGCTC ACCAAAACCTACCAGAGCAAGAACAGGCTCTCTCAGCTACTCACGTCATC GCTGTTCAGGCGGCGCCAAGACGAGATGGGTGCGGTTGTCGAGAGAGCCA TCTTAAGCCTTCAAGTGAGTACAGTGATTTTTCTGACATACCATTGTCCC GAGAAGACTTGCGGGGTCCAAACGTAGGTACTACTGGACTACCTGACAGG GTGTCCCTGAGACCGATTATTCTCATATCAAAATACCTGCCTGTGGAGAA GAACCGTGAGTATGATGATGCAGTATCTTGGACACACATCCTTTGAGCGC CCACCTCCGTCGGGTTCACCCACTGGATATGATAAACGTTTGTACACGTC CTCGATGCGGTTCAGCTGGGCCTACACGTTCAAGTCGGAAGCGACGTCAG TGCAGTCAAGCATGATATTGGCGCCGTCAAGTACGACATGCACCTATACA AGGTGAGACGGGGCCTACTGGCATTCACGTGGGCGTGCAGACTGACCAAC GTAATATAACTCCGACCTTTCTGCAGGCTCGCCCATTACGTATTTAGCTG GATCGACCGTGCATACCACAGAACAAGGCAGACATTGCCCAACAAAGTCT CTGGGGATGCGGCACCACATGTAAAGGCCATATTTGGCGTGTATACCTAA GTCAAATCAAGCTTGTCGTTTGTGAGGTCCTCAAACAATTTGCAACACCC GTGTCTAATGATCACCTGTCTGTCCGGTTGCATCATTCGTTCCCTATTTT ACAGGGGTCTGTGGAGGAAGATCAGTCGAAATATTTGGCGGACACGCGTA AGGCGAGGAGGCAGCGCAAGCTACACAAACTTGAAATCTCTGAGGACGAC GTGACCATCACCGACGAACTGCTGGGAAAGGGTGGCTTTGGTGAGGTGTA CCTAGCCGACTACAACGGACGCAACGCCGCTGTCAAGGTAAGACGGTTGC TAAATAGTAGTTTTAGATGGGTGCCGGAGTCATGGTTGTCATGTCGGGGC GTCTAGTATTTGAATAAAGTTTGCACATCATCCTCAACCCGACGCTGGGC AAAATGGTACTCGCAATCTCTCTGGGAATGGTGCCGGCTAGACATACCTC AAACATCATATATGTCTAGAACACTGATCGTGGCCATATGTGTCTCTTCG TGGATAGGTGATGGGGCGTCATATTGTGACAGGACAGGCAAAACAAACAT CGCCCGACGAAAGGCCAAATAATTCGAGGGAGCGAAACGGTTTGCTGATG AACAATTGCATGCACCCACCACAGCTTCGACACTGGCAGACATGGGTAAT ATACACGTGTTGGTTGTATTTCCTACCGAACGTTTGGCTCTATTGCACGC AGAGACACAAGCACCAAAATCGTACGAGCTGTGGTACAAGGATCGAAGTT GATGCCTTCAATATCGACGTCCCTATCCTATGCTGGGTCCACGCAAGCCC GCAACAAGACGCAAAGCGCTCGGGGTAGTCGGCAGGTCCATTCCAAATAT CTGCATGGTGTTCAGTCAAAGGGGAAGTGTACGTGACCATAATCGAATAC TCTGCTTTAAATTGTTTGCCGTTGACACACGGTCGGTAAAATATTAGGTT CTTGATCATCGGAAAACGTGTTTTGCATTGTTTCCATAGTTTGAGATTTT GTAATGTATCAAAATACGGAGGCATTCTGTCACAATCTGTGAAATTCTTC ATAAGTAAAAATATCAGATTTGTTTTTTTCCCGTGTTTGGAAAACAAAAA GAGGAAAATCTGGGAAAGTGAAAAAAGGCGCGAAACACATATGGATGTAA TTAATTGAAAACCACATTTCTCCGATAAGAAAGGGTCTTAGCACTCGGTT ACGTTCGTAGTTTCTATGCTGCCGTGATTTACACACGGGCCTGAACATCC GGTGCGACTGGGTTTTGAGGTATTTGTTGCTCTGGAAACAGGCTCCAACA GCCTAAACGCTTCTCTACGAGCAGCTGATTTCTTGACTTGAGGGCGTGTT AAATCCTCCTGAATGCCCAGTTTTCCTTGAACCCGAGTAAAAAAGCAAAG GACAGATAATTGGTTCTGTGTTAACGTAGCTACTTACTGGCATTTACTGT TGGCTGCTGCTCGGGTCTACACGTATGATGTCACTCGTATTGACTATATC CCCGCCGGTTATGCACGGGTCTGAACATGTTGTGAATGGCGTGTGACTCT AACACCATGAATATTCTCTCTAGCTGACGCTTCACCGTCGAAGCGCGTTG AAGTACGTTGTCAAGGGCGTAGATACGTATCCAGTTTTGCAGTGATGACG CACGTGTTTGGCGGGGTATGTCTGCTTCATTGGACATTTGCAGCGTGCGC AATATTTTGGAGACCTCCCCCCGGCATTCATATTTTCAGCACCATCAAAG TGCAATACGTCATCACATGTATCCTGATGCTGGATCCAAGCAGGATTGCA ACATCACCAACTTCCCCGGGGCCATTTATTGGGGCAATTCAGAATTCCTG TTATGTTTCTTCCCGATAGCAAGGTCAACATGAGTATCTCCAAACTGTTG GGAGTCCCGCTTCTTTCCGCGCTCTACGACATAGCGCCTGATAAAAGATC ACGATGCACGGGCATGTGTGCCGCGTCTCGCGTGATCTGCCCCTGTCATC TCCCGGTGAACTTCGTCGCCGAACAACACAGGTACTGCACATCAACAACG ACCTCGGAAGACGCGGCGAGAATGACGTTCTTGACGGATCCACGGTCGGC CAGGTCAAGAGACAGAGAGAGCAGATCCAGCGCAAGGCCTTTCTGCTGGA GCTCGACGCGATGATCCGCCTCCGGAGCCCGTACACCGTCAACGTCTACG GAGCGGTCACGGCCGTGCAGGACCGCCTGGTGCTCGTCATGGAGCTGCTG TCAGGCGGAGACCTCCGAACGATGTTGAGCAACTGCGAGCAACCCCTTCC CGAACATCAGTCACGTCAGATCATCGGCGACATCTGCGCGGGGATGGCCT TCTTGCACAGCAAGGAGGCCGTCCACGGAGACCTCAAGTCGGCCAATGTG CTACTAGACGGGGCCGGCAGGGCCAAGGTAGGGGTATATCGCCTTAAGAG ACGGTAGCTATTTCGCTGTGCATCTGACGTGGGGAAACATGTGACGCTGC AGGTAGAACGAAACAAACCCCAGACGTTCGACATGAGAGCATCAACGGGT GTTTCTGTGGAAGTAGTCGCCGCCATGTGGCGCCCATTCCACCCAGGGCC ATGCAAGTAAATTGCCTCCAAAGATGTCTTATTTTTTAACGGACTGACTG AGGAAGGCCGTGAGATTTTTCCAGTATGTACGTCGCCATCCATGAATAAT CGCGTCTTGTCTATGGCGTTCGACTCCTATTTACGTTCCATCTTGCCTGC TCGTGTGTCATTCCAATTCGTCTCGTTTTTTTCCATTGGCGTATTCGTTT TCTTCCAGATCGGGGATTTTGGCACCTCTAGATGGACGGAGCACACCATG TCTACGGGTCTGGCCACGTTCACAACCAAGTCCAGCAAGAACACTCAGAT GAGCCTCGCATGGAGCGCTCCGGAGGTGCGCGAGCTATCCAAGTCGCGTA CCAATTCCTTTCACTTTGAGCGATTTTGTCAGCGTCTAATCAGTTGGCAC CTCGCAATACATTGAGGATCCATTGAGGGCTTCTGTAGCTGATTCCGGGT TCCAAAACCACCATTCAAGCGTCCTTTATACGACTAATCAAGACCTCATC CGATACACACTCATGATCAACCATTGGGCATATCATCATCGCGTGACATT CTCAAGACAGCTATACATTTGCACCTCAGAATAGGTGCAATACGGTCGTC GTTCAGAACGCATTATTATAGCGCATTGAAACAACTATACCTGTATTCTG CGGTGTGGCTCTGGGCACCTACAATATATATAGCGTCACTGTGAGCCCAG GAACTTGGAAGTATACATTATCGCCTGGTCTTCTCCGTGCTGAGCACCAG TAGTTGGAAATACTTTGAGTGGCTCGATGTCCAAACCATGGTCCAAGCCA ATGTCAACTTGCTAGATTGGATCCGGCTGCCACTTTTCTTCCTTTCTGGA GATCGCGGGATATCCCGGCCATTCTAAAATCGTGTATTTACCGCCTACAA GTGGTTTCTCTTGATGAACCCCTTTGAGCGGATCTGTGAGAGTAAAAAAG TATCGAAACTATACACCAGAGAACGGGTACAGGATCCATATATGAAGCAG TCCGTCTTCCCAGAGTAGTGAGGGATGCGTCTAACTCTCGACGTGAAGAG CCTAATGGCACACGCGCCAGTATGGCGATACTTCGTATCTACTACTGTAC ACGCTTCATACTCCCTACGTATACGCTGGTAGTTATGTCGCACCTTTTGA GTCGGAGTACACGCGTCCCAAATGGTCCAATAGGTATAGCGCAGGCTCCC TGCGCATATCTCCTCGACTTCCGCATAGCGCCGCCGTGGAACCCAACGAC TGTGCCCGACACACACCCTCCGCTACACGGTTCTGTGTCACATAACGCCT GCTTGTCGATCGAAGGTGCTGCATGTCGCCGGAAGCACCTACGCCAGCGA CGTCTACAGCTTCGGGATCGTTGTCTGGGAGGTGCTTTCCCGGGAACTTC CGTGGGCAACCGTCACGCACCCTAAGGATATTTACATACGTGTGGTGTTG AACGATTTGCGGCCTGATATGCCTGAGGGCGCCCCTACAGAAATTGCGGA CGTGGCGAGGGCGTGCTGGGTCGAAAGGCCCGCAGACCGCCCAGCCTTCA GCACCATGATGAAAAGCATGAAGGCCAACAGGTGGAATTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1123:22719..28759-

>mRNA_M-pyrifera_M_contig1123.2577.1 ID=mRNA_M-pyrifera_M_contig1123.2577.1|Name=mRNA_M-pyrifera_M_contig1123.2577.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3204bp|location=Sequence derived from alignment at M-pyrifera_M_contig1123:22719..28759- (Macrocystis pyrifera P11B4 male)
TTGATTGTTACAACCTCAACCATCAACATATCAACGGGAGAACGGGACGA
ATTTACTCCAGCATTTGGCGGAGGGGGTGTGGCGGGTGCGGCGTTTATCA
AGGACGACCCCAAGCCAACATTGGACGAAATGGGACCTTCATCATCCACC
GATAACCGGGCGTCGACGGATTGCGTCGGGCTTGGCCAGGCCGTGGGAGA
TGCGGCGCATGAGCTGGCGCGTAATTGTCACATTCCCGGCGTGAGCGAAG
TGGCGACAGCGGTTGCTATTCTTGTTAACCTGGTCAATGATAACCGGGAC
ACTAAGAATGGAACTGAGGCGAGCCTCCGACGGTGCCGATCGATCGTCAT
GATGCTTCAGCGGGCGGCGAAGGTGCTTGGCAAGTTGATTGTTACAACCT
CAACCATCAACATATCAACGGGAGAACGGGACGAATTTACTCCAGCATTT
GGCGGAGGGGGTGTGGCGGGTGCGGCGTTTATCAAGGACGACCCCAAGCC
AACATTGGACGAAATGGGACCTTCATCATCCACCGATAACCGGGCGTCGA
CGGATTGCGTCGGGCTTGGCCAGGCCGTGGGAGATGCGGCGCATGAGCTG
GCGCGTAATTGTCACATTCCCGGCGTGAGCGAAGTGGCGACAGCGGTTGC
TATTCTTGTTAACCTGGTCAATGATAACCGGGACACTAAGAATGGAACTG
AGGCGAGCCTCCGACGGTGCCGATCGATCGTCATGATGCTTCAGCGGGCG
GCGAAGGTGCTTGGCAAGGGCGGCGACACCACCGGAAAGACAGAGCGAGC
TTTGATGGAAGATGTGCACGACGCAATATTTGATCTACTGGAGCTCACCA
AAACCTACCAGAGCAAGAACAGGCTCTCTCAGCTACTCACGTCATCGCTG
TTCAGGCGGCGCCAAGACGAGATGGGTGCGGTTGTCGAGAGAGCCATCTT
AAGCCTTCAAGGCGGCGACACCACCGGAAAGACAGAGCGAGCTTTGATGG
AAGATGTGCACGACGCAATATTTGATCTACTGGAGCTCACCAAAACCTAC
CAGAGCAAGAACAGGCTCTCTCAGCTACTCACGTCATCGCTGTTCAGGCG
GCGCCAAGACGAGATGGGTGCGGTTGTCGAGAGAGCCATCTTAAGCCTTC
AACTGGGCCTACACGTTCAAGTCGGAAGCGACGTCAGTGCAGTCAAGCAT
GATATTGGCGCCGTCAAGTACGACATGCACCTATACAAGCTGGGCCTACA
CGTTCAAGTCGGAAGCGACGTCAGTGCAGTCAAGCATGATATTGGCGCCG
TCAAGTACGACATGCACCTATACAAGGGGTCTGTGGAGGAAGATCAGTCG
AAATATTTGGCGGACACGCGTAAGGCGAGGAGGCAGCGCAAGCTACACAA
ACTTGAAATCTCTGAGGACGACGTGACCATCACCGACGAACTGCTGGGAA
AGGGTGGCTTTGGTGAGGTGTACCTAGCCGACTACAACGGACGCAACGCC
GCTGTCAAGGGGTCTGTGGAGGAAGATCAGTCGAAATATTTGGCGGACAC
GCGTAAGGCGAGGAGGCAGCGCAAGCTACACAAACTTGAAATCTCTGAGG
ACGACGTGACCATCACCGACGAACTGCTGGGAAAGGGTGGCTTTGGTGAG
GTGTACCTAGCCGACTACAACGGACGCAACGCCGCTGTCAAGGTACTGCA
CATCAACAACGACCTCGGAAGACGCGGCGAGAATGACGTACTGCACATCA
ACAACGACCTCGGAAGACGCGGCGAGAATGACAGACAGAGAGAGCAGATC
CAGCGCAAGGCCTTTCTGCTGGAGCTCGACGCGATGATCCGCCTCCGGAG
CCCGTACACCGTCAACGTCTACGGAGCGGTCACGGCCGTGCAGGACCGCC
TGGTGCTCGTCATGGAGCTGCTGTCAGGCGGAGACCTCCGAACGATGTTG
AGCAACTGCGAGCAACCCCTTCCCGAACATCAGTCACGTCAGATCATCGG
CGACATCTGCGCGGGGATGGCCTTCTTGCACAGCAAGGAGGCCGTCCACG
GAGACCTCAAGTCGGCCAATGTGCTACTAGACGGGGCCGGCAGGGCCAAG
AGACAGAGAGAGCAGATCCAGCGCAAGGCCTTTCTGCTGGAGCTCGACGC
GATGATCCGCCTCCGGAGCCCGTACACCGTCAACGTCTACGGAGCGGTCA
CGGCCGTGCAGGACCGCCTGGTGCTCGTCATGGAGCTGCTGTCAGGCGGA
GACCTCCGAACGATGTTGAGCAACTGCGAGCAACCCCTTCCCGAACATCA
GTCACGTCAGATCATCGGCGACATCTGCGCGGGGATGGCCTTCTTGCACA
GCAAGGAGGCCGTCCACGGAGACCTCAAGTCGGCCAATGTGCTACTAGAC
GGGGCCGGCAGGGCCAAGATCGGGGATTTTGGCACCTCTAGATGGACGGA
GCACACCATGTCTACGGGTCTGGCCACGTTCACAACCAAGTCCAGCAAGA
ACACTCAGATGAGCCTCGCATGGAGCGCTCCGGAGATCGGGGATTTTGGC
ACCTCTAGATGGACGGAGCACACCATGTCTACGGGTCTGGCCACGTTCAC
AACCAAGTCCAGCAAGAACACTCAGATGAGCCTCGCATGGAGCGCTCCGG
AGGTGCTGCATGTCGCCGGAAGCACCTACGCCAGCGACGTCTACAGCTTC
GGGATCGTTGTCTGGGAGGTGCTTTCCCGGGAACTTCCGTGGGCAACCGT
CACGCACCCTAAGGATATTTACATACGTGTGGTGTTGAACGATTTGCGGC
CTGATATGCCTGAGGGCGCCCCTACAGAAATTGCGGACGTGGCGAGGGCG
TGCTGGGTCGAAAGGCCCGCAGACCGCCCAGCCTTCAGCACCATGATGAA
AAGCATGAAGGCCAACAGGTGGAATTAGGTGCTGCATGTCGCCGGAAGCA
CCTACGCCAGCGACGTCTACAGCTTCGGGATCGTTGTCTGGGAGGTGCTT
TCCCGGGAACTTCCGTGGGCAACCGTCACGCACCCTAAGGATATTTACAT
ACGTGTGGTGTTGAACGATTTGCGGCCTGATATGCCTGAGGGCGCCCCTA
CAGAAATTGCGGACGTGGCGAGGGCGTGCTGGGTCGAAAGGCCCGCAGAC
CGCCCAGCCTTCAGCACCATGATGAAAAGCATGAAGGCCAACAGGTGGAA
TTAG
back to top