mRNA_M-pyrifera_M_contig112296.2576.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A517PL03_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PL03_9PLAN) HSP 1 Score: 388 bits (997), Expect = 1.370e-121 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWTQT 582
TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQD NWTQT
Sbjct: 2117 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDGNWTQT 2310
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A5A8BQR9_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BQR9_9PLAN) HSP 1 Score: 374 bits (960), Expect = 1.300e-116 Identity = 185/194 (95.36%), Postives = 190/194 (97.94%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWTQT 582
TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADN+TSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTI NG+FGDVVAIENDT+VVGARSTDVYTGSAYVFKRENNVWTQTAKL A+DAAP+ANFGSSVDIENSTIVIGARLDSETEYRSGAVYIF EQD NWTQT
Sbjct: 2131 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNDTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTISNGFFGDVVAIENDTLVVGARSTDVYTGSAYVFKRENNVWTQTAKLEADDAAPLANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFKEQDGNWTQT 2324
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A517WA17_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WA17_9PLAN) HSP 1 Score: 265 bits (677), Expect = 1.490e-78 Identity = 133/194 (68.56%), Postives = 156/194 (80.41%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWTQT 582
+Y QG AF+YVRNDQGTP+ T DDTW+YQ LLAPDADN SDRFG V ISGDTAVV A GD T E+ GSV+V+TRSNG WSFQQEL+V +T + +FGDVV IE DTIVVGAR+T+ YTGSAYVF+R + VWT+TA+L+A+D A ANFGS++DIE+STIVIGAR DSE+ RSGAVYIF EQ WTQT
Sbjct: 6851 SYPGQGAAFVYVRNDQGTPDDTSDDTWDYQDILLAPDADNGPSDRFGWSVDISGDTAVVGATLGDGTVEDMGSVYVYTRSNGNWSFQQELNVEETSESHFFGDVVKIEGDTIVVGARATENYTGSAYVFQRTDGVWTETARLMADDPAETANFGSAIDIESSTIVIGARFDSESLTRSGAVYIFEEQAGTWTQT 7044
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A2E7KHK0_9PLAN (Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KHK0_9PLAN) HSP 1 Score: 265 bits (676), Expect = 1.990e-78 Identity = 133/194 (68.56%), Postives = 155/194 (79.90%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWTQT 582
+Y +QG AF+YVRNDQGTP+ T DDTW+YQ LLAPD DN SDRFG V ISGDTAVV A GD T E+ GSV+V+TRSNG WSFQQEL+V +T + +FGDVV IE DTIVVGAR+T+ YTGSAYVF+R + VWT+ AKL+A+D A ANFGS++DIENSTIVIGAR DSE+ RSGAVYIF EQ WTQT
Sbjct: 2570 SYPNQGAAFVYVRNDQGTPDDTSDDTWDYQDILLAPDVDNGPSDRFGWSVDISGDTAVVGATLGDGTVEDMGSVYVYTRSNGNWSFQQELNVEETSESHFFGDVVKIEGDTIVVGARATENYTGSAYVFQRTDGVWTEAAKLMADDPAETANFGSAIDIENSTIVIGARFDSESLTRSGAVYIFEEQAGAWTQT 2763
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A518FLV2_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FLV2_9PLAN) HSP 1 Score: 246 bits (629), Expect = 9.300e-75 Identity = 123/192 (64.06%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWT 576
TY +G A IYVRNDQGTPEY+GDDTW+YQATL PDAD+N +D FG V ISGDTAVV AL+GD +AEN G+V+V+TRSNG WSFQQ+L V DTI NGYFGD +AIE DT+VVGA+ TD Y+GSAY+F+REN VWT+TA L A+ A F ++I++STIVIGA +S T +SGAVYI+ EQ WT
Sbjct: 357 TYPGEGAALIYVRNDQGTPEYSGDDTWDYQATLSPPDADSN-ADYFGWSVDISGDTAVVGALFGDGSAENMGAVYVYTRSNGEWSFQQKLTVPDTIANGYFGDTLAIEGDTLVVGAQGTDNYSGSAYIFQRENGVWTKTASLTADSPEENARFAEEIEIDHSTIVIGAVSESGTYSQSGAVYIYTEQAGTWT 547
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A518IAG5_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IAG5_9PLAN) HSP 1 Score: 253 bits (646), Expect = 2.180e-74 Identity = 125/192 (65.10%), Postives = 152/192 (79.17%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWT 576
TYS QGG FIYVRNDQGTPEYTGDDTW+YQATLLAPDAD+ T DRFG VAISGDTAVV A +GD T +N G+++V+TRSNGIWSFQQ+L V+DT G+FG++V IE DTIV + S D YTG+A+VF+R N W++TAKL ++ A FGSS+ IENSTIVIG+R +++T SGAVYIF E + NWT
Sbjct: 2694 TYSSQGGVFIYVRNDQGTPEYTGDDTWDYQATLLAPDADS-TPDRFGWSVAISGDTAVVGAQFGDGTTDNIGALYVYTRSNGIWSFQQKLIVSDTTNGGFFGEIVTIEGDTIVASSYSIDSYTGAAFVFQRVNGFWSETAKLTSDSPQEQAFFGSSIAIENSTIVIGSRRETDTLSASGAVYIFRETEGNWT 2884
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A518FLY7_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FLY7_9PLAN) HSP 1 Score: 249 bits (636), Expect = 4.640e-73 Identity = 129/194 (66.49%), Postives = 150/194 (77.32%), Query Frame = 1
Query: 1 TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWTQT 582
TY+ QG AF+YVRNDQGTP+ DDTW+YQ TLL P AD T D FG V ISGDTAVV A GD AE+ GSV+VFTRS+ W+FQQEL +T +G+FGDVVAIENDTIVVGAR+T+ TGSAYVF+R N VWT+TA+L+ANDA P A FG++VDI+NSTIVIGAR D E RSGAVYIF +Q WTQT
Sbjct: 402 TYAGQGAAFVYVRNDQGTPDDKSDDTWDYQDTLLVPYADA-TPDLFGWSVDISGDTAVVGAFRGDGIAEDMGSVYVFTRSDSSWTFQQELTAKETAESGFFGDVVAIENDTIVVGARTTENNTGSAYVFERTNGVWTRTARLIANDAIPFAYFGNTVDIDNSTIVIGARFDPEDFTRSGAVYIFKKQTGTWTQT 594
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A517Q7Z5_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q7Z5_9PLAN) HSP 1 Score: 246 bits (627), Expect = 7.680e-72 Identity = 124/187 (66.31%), Postives = 142/187 (75.94%), Query Frame = 1
Query: 16 GGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWT 576
GGAFIYVRNDQGTPEY GDDTW+YQATLL PDAD SD FG V ISGDTAVV A +GD +A+N G+V+V+TRSNGIW+FQQ+L VAD++ NG FGD +AIE DTIVV + D YTGSAYVF REN VW++TAKL A+ A FG S+DIENS IVIGAR S +SGA YIF EQ WT
Sbjct: 700 GGAFIYVRNDQGTPEYAGDDTWDYQATLLQPDADG-ISDYFGWSVGISGDTAVVGAFFGDGSADNMGAVYVYTRSNGIWTFQQKLTVADSVDNGQFGDTIAIEGDTIVVSNTAEDEYTGSAYVFSRENGVWSETAKLTADSPEVGARFGDSIDIENSMIVIGARYASAPYTKSGAAYIFTEQAGTWT 885
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A350K637_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K637_9PLAN) HSP 1 Score: 239 bits (611), Expect = 2.420e-71 Identity = 120/189 (63.49%), Postives = 146/189 (77.25%), Query Frame = 1
Query: 16 GGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWTQT 582
GGAFIYVRNDQGTP+Y+GDDTW+YQ+TL A DAD SD +G V ISGDTAVV A GD T +N GS +V+TRSNG+W+FQQ+L+ +D N +FG +V IE DTIVVGAR + TGSAYVF R + VWT+TAKLVA+DA NF +++DIENSTIV+GA +SET RSGAVY+F EQD WTQ+
Sbjct: 306 GGAFIYVRNDQGTPDYSGDDTWDYQSTLFASDADTY-SDNYGWSVDISGDTAVVGAPQGDGTIDNIGSAYVYTRSNGVWTFQQQLNASDAKFNSFFGSIVTIEGDTIVVGARVENNNTGSAYVFTRVDGVWTETAKLVADDAEEEMNFANTIDIENSTIVVGALYESETYPRSGAVYVFTEQDGVWTQS 493
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Match: A0A518A3Y8_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A3Y8_9PLAN) HSP 1 Score: 244 bits (623), Expect = 2.720e-71 Identity = 123/187 (65.78%), Postives = 142/187 (75.94%), Query Frame = 1
Query: 16 GGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVAISGDTAVVAALYGDETAENAGSVFVFTRSNGIWSFQQELHVADTIGNGYFGDVVAIENDTIVVGARSTDVYTGSAYVFKRENNVWTQTAKLVANDAAPVANFGSSVDIENSTIVIGARLDSETEYRSGAVYIFNEQDENWT 576
G AFIYVRNDQGTPEY GDDTW+YQATLL DAD SD FG V ISGDTAVV A +GD +A+N G+V+V+TRSNGIW+FQQ+L VAD++ NG FGD +AIE DTIVV + D YTGSAYVF REN VW++TAKL A+ A FG S+DIENSTIVIGAR S + +SGA YIF EQ WT
Sbjct: 6840 GAAFIYVRNDQGTPEYAGDDTWDYQATLLQSDADG-VSDYFGWSVGISGDTAVVGAFFGDGSADNMGAVYVYTRSNGIWTFQQKLTVADSVDNGQFGDTIAIEGDTIVVSNTAEDEYTGSAYVFTRENGVWSETAKLTADSPEVGARFGDSIDIENSTIVIGARYASAPDTKSGAAYIFTEQAGTWT 7025 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112296.2576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112296.2576.1 >prot_M-pyrifera_M_contig112296.2576.1 ID=prot_M-pyrifera_M_contig112296.2576.1|Name=mRNA_M-pyrifera_M_contig112296.2576.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp TYSDQGGAFIYVRNDQGTPEYTGDDTWEYQATLLAPDADNNTSDRFGHVVback to top mRNA from alignment at M-pyrifera_M_contig112296:1..582- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112296.2576.1 ID=mRNA_M-pyrifera_M_contig112296.2576.1|Name=mRNA_M-pyrifera_M_contig112296.2576.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig112296:1..582- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112296:1..582- >mRNA_M-pyrifera_M_contig112296.2576.1 ID=mRNA_M-pyrifera_M_contig112296.2576.1|Name=mRNA_M-pyrifera_M_contig112296.2576.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1164bp|location=Sequence derived from alignment at M-pyrifera_M_contig112296:1..582- (Macrocystis pyrifera P11B4 male)back to top |