mRNA_M-pyrifera_M_contig112290.2572.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A5A8CN92_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CN92_CAFRO) HSP 1 Score: 146 bits (369), Expect = 4.600e-38 Identity = 82/139 (58.99%), Postives = 102/139 (73.38%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDE--SVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLY 411
A++S LV +DR DD+ + L L P L+ AA RVA+ S++A I IE+D+Y+KS +M+ VF WA+GA F+ V TK FEGSIIRVIRRLEELLRQLADAAR+IG+ ALE KF A+S +MRRDIVFAASLY
Sbjct: 1076 ALMSCLVASDRSKDDDEGAESLAPELGGPLRVLQEAARRVARVSEEAGIEIEVDDYVKSMSPSLMQVVFSWASGARFSEVATMTKEFEGSIIRVIRRLEELLRQLADAARAIGDEALESKFKASSTAMRRDIVFAASLY 1214
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A812X2H8_9DINO (MTREX protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X2H8_9DINO) HSP 1 Score: 143 bits (360), Expect = 4.110e-37 Identity = 73/138 (52.90%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS LV+T+ G+ +S LP L P L+ A RVA S DA++ ++++EY++ F+ DMME V+ W G+ FA +C TK FEGS+IRVIRRLEELLRQLADA++S+G L +KF AA+ ++RRDI+FAASLY+
Sbjct: 521 ALLSCLVYTEHGDVADS-SLPDTLSGPLTTLRETARRVATVSADAKLEVDVEEYVEHFKCDMMEVVYAWTKGSKFADICALTKVFEGSVIRVIRRLEELLRQLADASKSVGELTLHDKFLAAAKAIRRDIIFAASLYL 657
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A0C9RTP3_AMBAM (Putative cytoplasmic exosomal rna helicase ski2 dead-box superfamily protein (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9RTP3_AMBAM) HSP 1 Score: 131 bits (329), Expect = 1.240e-35 Identity = 69/138 (50.00%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS LV ++ N E +L + L P +++ A RVAQ +KDA++ I+ D Y+ SF+ +M++V+ W+ G+ FA VC+ T FEGSIIR +RRLEELLRQ+ AA+ IGNS LE KF+ A ++RDIVFAASLY+
Sbjct: 80 ALLSCLVFQEKSN--EMPNLTEELSGPLRQMQDIARRVAQVTKDAKLCIDEDTYVSSFKPHLMDAVYAWSKGSSFAQVCRMTDVFEGSIIRCMRRLEELLRQIVQAAKCIGNSELENKFSEAVKLIKRDIVFAASLYL 215
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A7S2BI41_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI41_9STRA) HSP 1 Score: 128 bits (322), Expect = 8.180e-35 Identity = 70/139 (50.36%), Postives = 96/139 (69.06%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDES-VHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS LV DR + E L + L P ++ AA +A+ S +A++ ++ +EY++SF D+ME+V+ WA GA F V K T AFEGS+IR+IRRLEELLRQLA A+ IGN L++KF+ + MRRDIVFAASLY+
Sbjct: 57 AMLSCLVFQDRRKEQEGGPQLRENLAGPYRMVQEAARLIAKVSVEAKLDLDAEEYVQSFNPDLMEAVYEWATGAKFVEVMKLTDAFEGSVIRIIRRLEELLRQLASASFVIGNKDLKQKFDECAGRMRRDIVFAASLYL 195
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A8B7DK02_HYDVU (superkiller viralicidic activity 2-like 2 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DK02_HYDVU) HSP 1 Score: 132 bits (331), Expect = 2.690e-34 Identity = 65/138 (47.10%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS V ++G DE L + L P ++K +A R+A+ S++A++ I++DEYI SF+ MM+ V+ W+ G+ FA +CK T FEGS+IR +RRL+ELLRQ+ AA++IGN+ LE KF+ ++RDI+FAASLY+
Sbjct: 248 ALLSCFVFQEKG--DEVAKLSETLAGPLRQMKESARRIAKISEEAKMEIDVDEYIDSFKPQMMDVVYAWSTGSTFADICKMTDVFEGSVIRCMRRLDELLRQMCQAAKAIGNTELENKFSDGITKIKRDIIFAASLYL 383
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A7S2XGX2_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XGX2_9EUKA) HSP 1 Score: 123 bits (308), Expect = 1.160e-33 Identity = 59/112 (52.68%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 79 PAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
P +++ +VA A +DAR+PI++D+++ F+ MM+ VF W GA F +CK T FEG+IIR IRRLEELLRQ+A AA+ IGNS LEEKF ++RDI+FAASLY+
Sbjct: 7 PLRQMRECIKKVATAIEDARLPIDVDDFVDQFKPSMMDIVFAWVKGAKFVDICKLTDIFEGTIIRCIRRLEELLRQMASAAKLIGNSDLEEKFQEGIKKLKRDIIFAASLYL 118
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: T0S321_SCHJY (Uncharacterized protein n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=T0S321_SCHJY) HSP 1 Score: 132 bits (332), Expect = 4.390e-33 Identity = 67/138 (48.55%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS LV ++ ND E++HL + L P + L+ A R+A+ S+++++ + DEY++SF+ +M VF WA+GA FA +CK T +EGS+IR+ RRLEELLRQ+ DAA+ IGN+AL++K + A + RDIVF+ASLY+
Sbjct: 960 ALLSCLVFQEKSND-ENLHLKEELSGPHKILQEMARRIAKVSQESKLNVIEDEYVESFKPSLMPVVFAWAHGATFAHICKMTDVYEGSLIRMFRRLEELLRQMGDAAKVIGNTALQKKMEDSIACIHRDIVFSASLYL 1096
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: D0NDN9_PHYIT (DSHCT domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NDN9_PHYIT) HSP 1 Score: 124 bits (312), Expect = 5.000e-33 Identity = 60/138 (43.48%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS L++T++ + + + L+ P +L+ A R+A+ +DA++ I++DEY +F ++++ V W GA F+ +CK + AFEG+IIR +RRLEELLRQ+ AA SIG+ LE+KF+ ++RDIVFAASLY+
Sbjct: 82 ALLSCLINTEKKKESDKPPQAESLEVPVRQLRETAQRIAKVMQDAKMTIDVDEYAGAFNTNLVDVVIAWCQGAKFSQICKMSDAFEGTIIRCLRRLEELLRQVTLAAHSIGDVELEKKFDEGGKKLKRDIVFAASLYL 219
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: L7MI60_RHIPC (Putative nuclear exosomal rna helicase mtr4 dead-box superfamily (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MI60_RHIPC) HSP 1 Score: 129 bits (323), Expect = 5.130e-33 Identity = 67/138 (48.55%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKAFEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A+LS LV ++ N E +L + L P +++ A R+A+ +KDA++ I+ D Y+ SF+ +M+ ++ W+ GA FA VC+ T FEGSIIR +RRLEELLRQ+ AA+ IGN+ LE KF+ A M+RDIVFAASLY+
Sbjct: 263 ALLSCLVFQEKSN--EMPNLTEELSGPLRQMQDIARRIARVTKDAKLCIDEDTYVSSFKPHLMDVIYAWSKGASFAHVCRMTDVFEGSIIRCMRRLEELLRQIVQAAKCIGNTELENKFSEAIKLMKRDIVFAASLYL 398
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Match: A0A0G4IPE5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IPE5_PLABS) HSP 1 Score: 132 bits (331), Expect = 5.950e-33 Identity = 70/139 (50.36%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEIDEYIKSFRQDMMESVFLWANGAPFAAVCKRTKA-FEGSIIRVIRRLEELLRQLADAARSIGNSALEEKFNAASASMRRDIVFAASLYI 414
A++S LV+T++G DE++HL +PL P L+ A R+A+ S ++++ ++ EY+ SF+ D+M V W GA FA VCK + FEGSIIR +RRLEELLRQL+ AA+ IGN+ LE KF+ A ++RDIVFAASLY+
Sbjct: 888 ALVSCLVYTEKG--DENLHLEEPLAAPLRTLRDHAKRIAEVSNESKLQLDTTEYVSSFKPDLMPLVQAWCRGAKFADVCKMAPSIFEGSIIRCMRRLEELLRQLSSAAKLIGNADLETKFDQGIALIKRDIVFAASLYL 1024 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112290.2572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112290.2572.1 >prot_M-pyrifera_M_contig112290.2572.1 ID=prot_M-pyrifera_M_contig112290.2572.1|Name=mRNA_M-pyrifera_M_contig112290.2572.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp AVLSSLVHTDRGNDDESVHLPKPLQTPAERLKSAALRVAQASKDARIPIEback to top mRNA from alignment at M-pyrifera_M_contig112290:2..421+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112290.2572.1 ID=mRNA_M-pyrifera_M_contig112290.2572.1|Name=mRNA_M-pyrifera_M_contig112290.2572.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig112290:2..421+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112290:2..421+ >mRNA_M-pyrifera_M_contig112290.2572.1 ID=mRNA_M-pyrifera_M_contig112290.2572.1|Name=mRNA_M-pyrifera_M_contig112290.2572.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig112290:2..421+ (Macrocystis pyrifera P11B4 male)back to top |