mRNA_M-pyrifera_M_contig112268.2569.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112268.2569.1
Unique NamemRNA_M-pyrifera_M_contig112268.2569.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A1Y1YDU3_9FUNG (Dolichol-phosphate mannosyltransferase subunit 1 n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YDU3_9FUNG)

HSP 1 Score: 136 bits (343), Expect = 3.000e-36
Identity = 82/196 (41.84%), Postives = 111/196 (56.63%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNG-VVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            L GF   +GE+LLCM ADL HP   VPE+++AI    S   FA+GTR   +  VVDE      +WPL+R+++S GA L+A PL    +SDPMTGFF++R+  + R     +VN++GFK+ LEL V+ ++                                 H EVP  FGVR  GESKLSGKVI++Y++QL  LY
Sbjct:   91 LRGFNEAQGELLLCMDADLQHPPEKVPEMLQAIDAAKSGAEFAIGTRYAADEFVVDE------NWPLYRQVVSKGARLMARPLTP--LSDPMTGFFSIRREAYRRAR---NVNSIGFKICLELYVKSEIRK-------------------------------HAEVPIMFGVRTVGESKLSGKVIINYLKQLQELY 244          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A1G4ML89_LACFM (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4ML89_LACFM)

HSP 1 Score: 135 bits (341), Expect = 5.010e-36
Identity = 86/195 (44.10%), Postives = 114/195 (58.46%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            L+GF   +GE L+CM ADL HP  +VP+L     + + T  F LGTR  P   +D+       WPL+RR+IS+GA +LA PL +   SDPM+GFF ++K ++    + GD+NA GFK+AL+LLV+  LP   +P                   IGE        VPF FGVR+ GESKLSGKVIV Y++QL  LY
Sbjct:   80 LKGFYEAKGEYLICMDADLQHPPESVPQLF----DSLRTHPFVLGTRYAPGVGIDK------DWPLYRRVISSGARMLAKPLTT--ASDPMSGFFGLQK-KYLLQSQTGDINAQGFKIALDLLVKLPLP-TNQP-------------------IGE--------VPFSFGVRVEGESKLSGKVIVQYIQQLRELY 233          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A1G4JLG8_9SACH (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Lachancea mirantina TaxID=1230905 RepID=A0A1G4JLG8_9SACH)

HSP 1 Score: 132 bits (333), Expect = 8.210e-35
Identity = 87/195 (44.62%), Postives = 111/195 (56.92%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            L GF   +G+ L+CM ADL HP  +VP L+ ++     T +F LGTR  P   +D+       WPL+RR+IS+GA L+A PL     SDPM+GFF ++K  +      GDVNA GFK+AL+LLV+ QLP          A  A          IGE        VPF FGVR  GESKLSGKV++ YV+QL  LY
Sbjct:   80 LRGFRDAQGQYLVCMDADLQHPPESVPALLTSL----RTHAFVLGTRYAPGVGIDK------DWPLYRRVISSGARLMARPLT--VASDPMSGFFGLQK-RYLDAARPGDVNAQGFKIALDLLVKLQLP----------AHNA----------IGE--------VPFSFGVRTEGESKLSGKVMIQYVQQLRELY 233          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: M2RCD7_CERS8 (Dolichol-phosphate mannosyltransferase subunit 1 n=2 Tax=Gelatoporiaceae TaxID=2028217 RepID=M2RCD7_CERS8)

HSP 1 Score: 132 bits (333), Expect = 9.500e-35
Identity = 82/195 (42.05%), Postives = 105/195 (53.85%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            + GF    GE +LCM ADL HP   VP+++ +++  +    F LGTR  P   VD+       WPL+RR+IS+GA LLA PL S   SDPM+GFF +RK  F +      +N  GFK+ALELLV+  +P                              G   EVPF FGVR  GESKL+GKV+V Y+ QLA LY
Sbjct:   85 VRGFQEAAGESMLCMDADLQHPPEYVPQMLASLSPHVQ---FVLGTRYAPGVEVDK------DWPLYRRVISSGARLLALPLTS--ASDPMSGFFGIRKEAFLKARS---INGAGFKIALELLVKAHIPR-----------------------------GAIAEVPFSFGVRAEGESKLTGKVMVKYLEQLAELY 236          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A165CXW5_9APHY (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165CXW5_9APHY)

HSP 1 Score: 129 bits (325), Expect = 2.240e-33
Identity = 85/196 (43.37%), Postives = 109/196 (55.61%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPN-GVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            + GF   +G+ LLCM ADL HP   VP+++ A++ PM    F LGTR   N G VDE       WPL+RR+IS GA +LA PL S   SDPM+GFF +RK  F +      +N+ GFK+AL+LLV+ Q+P  A                               EVPF FG+R AGESKL+GKV+V Y+ QL  LY
Sbjct:   86 VRGFQEAQGDNLLCMDADLQHPPEFVPQMLAALS-PMR--QFVLGTRYGGNAGAVDEG------WPLYRRVISGGARMLALPLTS--ASDPMSGFFGIRKEAFLKARS---LNSQGFKIALDLLVKAQIPSHAI-----------------------------AEVPFSFGLRTAGESKLTGKVMVRYLEQLLELY 238          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A1G4IV65_9SACH (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Lachancea sp. CBS 6924 TaxID=433476 RepID=A0A1G4IV65_9SACH)

HSP 1 Score: 128 bits (321), Expect = 4.800e-33
Identity = 83/195 (42.56%), Postives = 108/195 (55.38%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            L+GF   EG+ L+CM ADL HP  +VP+L     + +   +F LGTR  P   +D+       WPL+RR+IS+GA ++A PL +   SDPM+GFF ++K        + D+NA GFKVAL+LLV+  LP                        IGE        VPF FGVR  GESKLSGKVIV Y++QL  LY
Sbjct:   80 LKGFRDAEGQYLVCMDADLQHPPESVPQLF----DVLRNHAFVLGTRYAPGVGIDK------DWPLYRRVISSGARMMARPLTT--ASDPMSGFFGLQKKYLLETDPK-DINAQGFKVALDLLVKLPLPQTKA--------------------IGE--------VPFSFGVRTEGESKLSGKVIVQYLQQLQELY 233          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A376BA74_9ASCO (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Saccharomycodes ludwigii TaxID=36035 RepID=A0A376BA74_9ASCO)

HSP 1 Score: 127 bits (320), Expect = 6.920e-33
Identity = 85/195 (43.59%), Postives = 104/195 (53.33%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            L GF   +GE L+CM ADL HP  +VP+L+    E +    F LGTR  P   +D+       WPLHRRIIS GA  LA PL S   SDPM+GFF ++K ++     +  +NA GFKVAL+L+V+  LP    P                             EVPF FGVR  GESKLSGKVIV Y+ QL  LY
Sbjct:   81 LRGFYEAKGEYLVCMDADLQHPPESVPQLL----EKLRNYPFVLGTRYAPGVGIDK------DWPLHRRIISNGARCLAKPLTS--ASDPMSGFFGLQK-KYLLEAPKDSLNAEGFKVALDLMVKLPLP----PKDPIG------------------------EVPFSFGVRTEGESKLSGKVIVQYLVQLKELY 234          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A0F7SKX1_PHARH (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SKX1_PHARH)

HSP 1 Score: 127 bits (320), Expect = 7.430e-33
Identity = 84/195 (43.08%), Postives = 109/195 (55.90%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            + GF   EG  +LCM ADL HP   VP ++ A++   S   F LGTR    GV  +A     SWP++RR+IS+GA ++A PL S   SDPM+GFF +RK EF +     ++N+ GFK+AL+LLV+ Q+P                       GI         EVPF FGVR  GESKLSGKV+V Y+ QL  LY
Sbjct:   88 VRGFREAEGGKMLCMDADLQHPPEYVPSMLAALS---SAQPFVLGTRYA-KGVEMDA-----SWPMYRRVISSGARMMALPLTS--ASDPMSGFFGIRKEEFLKAK---NLNSSGFKIALDLLVKAQIPSR---------------------GI--------AEVPFSFGVRSEGESKLSGKVMVKYLEQLVELY 239          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A1E5R4P1_9ASCO (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Hanseniaspora osmophila TaxID=56408 RepID=A0A1E5R4P1_9ASCO)

HSP 1 Score: 127 bits (319), Expect = 9.740e-33
Identity = 86/195 (44.10%), Postives = 110/195 (56.41%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY 585
            L+GF   +G+ L+CM ADL HP  +VP+L+K++     T  F LGTR  P   +D+       WPL+RR+IS+GA  LA PL     SDPM+GFF ++K E     + G VNA GFK+AL+LLV+  LP     D +                IGE        VPF FGVR  GESKLSGKVI+ Y+ QL  LY
Sbjct:   82 LKGFYDSKGQYLVCMDADLQHPPESVPQLLKSL----RTHPFVLGTRYAPGVGIDK------DWPLYRRVISSGARSLAKPLT--VASDPMSGFFGLQKKELLAAPQ-GSVNAKGFKIALDLLVK--LPF----DDKL---------------IGE--------VPFSFGVRTEGESKLSGKVIIQYLVQLKELY 234          
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Match: A0A1V9ZLM0_9STRA (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.680e-32
Identity = 82/192 (42.71%), Postives = 104/192 (54.17%), Query Frame = 1
Query:    1 LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVPNGV-VDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKGEFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARDWGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQL 573
            L GF    G++LLCM ADL HP  +VP LI AI   +    F +GTR    G  VD+       WPLHR++ S+GA +LA PL+  A+SDPMTGFF +      R  + GD+N +GFK+ALEL V+                    RV R            H EVP  FGVR+ GESKL+GKVI+ Y+R L
Sbjct:   81 LRGFKEARGKLLLCMDADLQHPPESVPALIDAIDPALGKAEFVIGTRYGGAGFSVDK------DWPLHRQLASSGARMLARPLS--ALSDPMTGFFGLPTEVLARA-KAGDINPIGFKIALELFVKC-------------------RVVR------------HAEVPINFGVRVHGESKLTGKVIIQYLRHL 232          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112268.2569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1YDU3_9FUNG3.000e-3641.84Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A1G4ML89_LACFM5.010e-3644.10Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A1G4JLG8_9SACH8.210e-3544.62Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
M2RCD7_CERS89.500e-3542.05Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A165CXW5_9APHY2.240e-3343.37Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A1G4IV65_9SACH4.800e-3342.56Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A376BA74_9ASCO6.920e-3343.59Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A0F7SKX1_PHARH7.430e-3343.08Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A1E5R4P1_9ASCO9.740e-3344.10Dolichol-phosphate mannosyltransferase subunit 1 n... [more]
A0A1V9ZLM0_9STRA1.680e-3242.71Dolichol-phosphate mannosyltransferase subunit 1 n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112268contigM-pyrifera_M_contig112268:1..585 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score131.7
Seed ortholog evalue3.6e-28
Seed eggNOG ortholog1071379.XP_004182532.1
KEGG rclassRC00005
KEGG koko:K00721
KEGG ReactionR01009
KEGG Pathwayko00510,ko01100,map00510,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000030,GO:0003674,GO:0003824,GO:0004582,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019637,GO:0019867,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0070085,GO:0071704,GO:0071944,GO:0090407,GO:0097502,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
EggNOG free text desc.to Saccharomyces cerevisiae DPM1 (YPR183W)
EggNOG OGs38E12@33154,3NUQC@4751,3QRBR@4890,3RS1B@4891,3S07E@4893,COG0463@1,KOG2978@2759
EC2.4.1.83
COG Functional cat.M
CAZyGT2
Best tax levelSaccharomycetaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons1
Model size585
Cds size585
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815636.5335224-CDS-M-pyrifera_M_contig112268:0..5851622815636.5335224-CDS-M-pyrifera_M_contig112268:0..585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112268 1..585 -
1692277498.6788137-CDS-M-pyrifera_M_contig112268:0..5851692277498.6788137-CDS-M-pyrifera_M_contig112268:0..585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112268 1..585 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112268.2569.1prot_M-pyrifera_M_contig112268.2569.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112268 1..585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112268.2569.1

>prot_M-pyrifera_M_contig112268.2569.1 ID=prot_M-pyrifera_M_contig112268.2569.1|Name=mRNA_M-pyrifera_M_contig112268.2569.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
LEGFLRGEGEVLLCMGADLPHPAAAVPELIKAIAEPMSTCSFALGTRTVP
NGVVDEATGESHSWPLHRRIISAGAALLAWPLASPAVSDPMTGFFAMRKG
EFHRIHERGDVNAVGFKVALELLVRGQLPHIAEPDSEFAAEGARERVARD
WGGIGEADGGHHCEVPFEFGVRMAGESKLSGKVIVSYVRQLASLY
back to top

mRNA from alignment at M-pyrifera_M_contig112268:1..585-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112268.2569.1 ID=mRNA_M-pyrifera_M_contig112268.2569.1|Name=mRNA_M-pyrifera_M_contig112268.2569.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig112268:1..585- (Macrocystis pyrifera P11B4 male)
TTGGAGGGCTTTCTGCGGGGGGAGGGGGAGGTGCTCCTCTGCATGGGCGC CGACCTGCCACACCCCGCCGCTGCAGTGCCGGAGCTCATCAAGGCAATCG CCGAGCCAATGAGCACGTGCTCCTTTGCATTGGGCACTCGAACGGTGCCC AACGGAGTGGTTGACGAGGCCACTGGCGAATCGCACTCTTGGCCACTGCA CAGGAGAATCATCTCTGCCGGCGCCGCTCTCCTCGCCTGGCCACTCGCCT CTCCTGCAGTGAGTGACCCCATGACTGGGTTCTTTGCCATGCGCAAGGGC GAGTTCCACCGCATCCACGAGAGGGGAGACGTCAACGCCGTGGGCTTCAA GGTAGCGCTGGAGCTCCTCGTCAGGGGCCAGCTGCCACACATTGCGGAGC CTGACAGCGAATTCGCTGCGGAGGGAGCGAGGGAGAGAGTGGCGAGGGAC TGGGGGGGCATTGGAGAGGCAGACGGCGGCCACCACTGTGAAGTGCCGTT CGAGTTCGGTGTGAGGATGGCGGGAGAGTCCAAGCTCAGTGGGAAGGTGA TTGTCTCCTACGTGCGGCAGCTGGCCTCCCTCTAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig112268:1..585-

>mRNA_M-pyrifera_M_contig112268.2569.1 ID=mRNA_M-pyrifera_M_contig112268.2569.1|Name=mRNA_M-pyrifera_M_contig112268.2569.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig112268:1..585- (Macrocystis pyrifera P11B4 male)
TTGGAGGGCTTTCTGCGGGGGGAGGGGGAGGTGCTCCTCTGCATGGGCGC
CGACCTGCCACACCCCGCCGCTGCAGTGCCGGAGCTCATCAAGGCAATCG
CCGAGCCAATGAGCACGTGCTCCTTTGCATTGGGCACTCGAACGGTGCCC
AACGGAGTGGTTGACGAGGCCACTGGCGAATCGCACTCTTGGCCACTGCA
CAGGAGAATCATCTCTGCCGGCGCCGCTCTCCTCGCCTGGCCACTCGCCT
CTCCTGCAGTGAGTGACCCCATGACTGGGTTCTTTGCCATGCGCAAGGGC
GAGTTCCACCGCATCCACGAGAGGGGAGACGTCAACGCCGTGGGCTTCAA
GGTAGCGCTGGAGCTCCTCGTCAGGGGCCAGCTGCCACACATTGCGGAGC
CTGACAGCGAATTCGCTGCGGAGGGAGCGAGGGAGAGAGTGGCGAGGGAC
TGGGGGGGCATTGGAGAGGCAGACGGCGGCCACCACTGTGAAGTGCCGTT
CGAGTTCGGTGTGAGGATGGCGGGAGAGTCCAAGCTCAGTGGGAAGGTGA
TTGTCTCCTACGTGCGGCAGCTGGCCTCCCTCTACTTGGAGGGCTTTCTG
CGGGGGGAGGGGGAGGTGCTCCTCTGCATGGGCGCCGACCTGCCACACCC
CGCCGCTGCAGTGCCGGAGCTCATCAAGGCAATCGCCGAGCCAATGAGCA
CGTGCTCCTTTGCATTGGGCACTCGAACGGTGCCCAACGGAGTGGTTGAC
GAGGCCACTGGCGAATCGCACTCTTGGCCACTGCACAGGAGAATCATCTC
TGCCGGCGCCGCTCTCCTCGCCTGGCCACTCGCCTCTCCTGCAGTGAGTG
ACCCCATGACTGGGTTCTTTGCCATGCGCAAGGGCGAGTTCCACCGCATC
CACGAGAGGGGAGACGTCAACGCCGTGGGCTTCAAGGTAGCGCTGGAGCT
CCTCGTCAGGGGCCAGCTGCCACACATTGCGGAGCCTGACAGCGAATTCG
CTGCGGAGGGAGCGAGGGAGAGAGTGGCGAGGGACTGGGGGGGCATTGGA
GAGGCAGACGGCGGCCACCACTGTGAAGTGCCGTTCGAGTTCGGTGTGAG
GATGGCGGGAGAGTCCAAGCTCAGTGGGAAGGTGATTGTCTCCTACGTGC
GGCAGCTGGCCTCCCTCTAC
back to top