mRNA_M-pyrifera_M_contig112229.2563.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112229.2563.1
Unique NamemRNA_M-pyrifera_M_contig112229.2563.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A7D8UWP6_9TREE (PIPK domain-containing protein n=1 Tax=Vanrija humicola TaxID=5417 RepID=A0A7D8UWP6_9TREE)

HSP 1 Score: 82.0 bits (201), Expect = 1.210e-16
Identity = 33/67 (49.25%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGG R++D ++R M ++YY+G+ID+  PYN +K +EHA KS+ E+P  +SCV+P  Y +RF++F+M
Sbjct:  633 DDGGLRATDEQNRPMDIIYYLGVIDICTPYNTKKCIEHAWKSMTENPVTISCVEPNTYGQRFLNFLM 699
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BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A8H7SMQ2_9FUNG (PIPK domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SMQ2_9FUNG)

HSP 1 Score: 79.3 bits (194), Expect = 1.060e-15
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGFRSSD ++R +  +YYMG+ID+L PYN  K+ EH  KS+ +  D +S V P  Y KRF+DF++
Sbjct:  462 DDGGFRSSDDENRPLDKLYYMGVIDILTPYNFIKRSEHIWKSITQDKDTISSVHPITYGKRFMDFMI 528
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: L8H972_ACACA (Phosphatidylinositol4 phosphate 5-kinase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H972_ACACA)

HSP 1 Score: 79.0 bits (193), Expect = 1.470e-15
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVMY 204
            D GG  S+D  D   G +Y+M IID+LQPYN RK++E+  K L E  DA+SCVDP +YS RFV F+ +
Sbjct: 1058 DRGGLASTDDFDEDQGEIYFMAIIDILQPYNWRKRLENTYKKLFEHEDAISCVDPIKYSNRFVSFIKF 1125
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A0C9N7G3_9FUNG (SAICAR synthase-like protein n=5 Tax=Mucor TaxID=4830 RepID=A0A0C9N7G3_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 1.980e-15
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGFRSSD +DR    +YY+GIID+L PYN+ K+ EH  KS+ +  D +S V P  Y KRF+DF++
Sbjct:  482 DDGGFRSSDEEDRPSDKLYYVGIIDILTPYNIVKRSEHIWKSITQDKDTISSVHPLIYGKRFLDFMV 548
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A8H7QMA6_9FUNG (PIPK domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QMA6_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 3.690e-15
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGFRSSD ++R +  +YYMG+ID+L PYN  K+ EH  KS+ +  + +S V P  Y KRF+DF++
Sbjct:  476 DDGGFRSSDEENRPLDKLYYMGVIDILTPYNFMKRSEHIWKSITQDKNTISSVHPIAYGKRFMDFMI 542
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A0B7NEF5_9FUNG (PIPK domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NEF5_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 3.690e-15
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGFRSSD +DR    +YY+GIID+L PYN+ KK EH  KS+ +  D +S V P  Y +RF++F++
Sbjct:  478 DDGGFRSSDEEDRPSDKLYYVGIIDILTPYNIVKKSEHIWKSITQDKDTISSVHPLVYGRRFMEFML 544
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A367JQH5_RHIAZ (Phosphatidylinositol-4-phosphate 5-kinase n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367JQH5_RHIAZ)

HSP 1 Score: 77.4 bits (189), Expect = 4.920e-15
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGFRSSD +D+ +  +YY+GIID+L PYN+ KK EH  KS+ +    +S V P  Y KRF++F++
Sbjct:  408 DDGGFRSSDEQDKPLDKLYYVGIIDILTPYNIAKKAEHIWKSITQDKTGISAVPPVIYGKRFLNFMI 474
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A8H3X408_GIGMA (SAICAR synthase-like protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3X408_GIGMA)

HSP 1 Score: 77.4 bits (189), Expect = 5.060e-15
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGF  +D ++R    +YY+G+ID+L PYN  KKVEHA KS+      +S VDP  Y KRF+DF++
Sbjct:  509 DDGGFAGTDEQNRNTNYIYYLGVIDILTPYNTVKKVEHAFKSVNHDKKMISAVDPQWYGKRFLDFMV 575
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A397W1S7_9GLOM (PIPK domain-containing protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397W1S7_9GLOM)

HSP 1 Score: 77.0 bits (188), Expect = 6.190e-15
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            DDGGF  +D ++R    +YY+G+ID+L PYN  KKVEHA KS+      +S VDP  Y KRF+DF++
Sbjct:  332 DDGGFAGTDEQNRNTNYIYYLGVIDILTPYNTVKKVEHAFKSVNNDKRMISAVDPQWYGKRFLDFMV 398
[Close]
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Match: A0A4P9ZLE8_9FUNG (PIPK domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZLE8_9FUNG)

HSP 1 Score: 73.6 bits (179), Expect = 9.930e-15
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1 
Query:    1 DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDALSCVDPAQYSKRFVDFVM 201
            D GGF ++D  DR    +YYMG+ID+L PYN  KK EH +KS+   P  +S V P +Y+ RF+DF++
Sbjct:   85 DSGGFLATDENDRPTNKIYYMGVIDILTPYNSSKKFEHLVKSVVHDPHTISSVHPREYAHRFMDFMV 151
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112229.2563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D8UWP6_9TREE1.210e-1649.25PIPK domain-containing protein n=1 Tax=Vanrija hum... [more]
A0A8H7SMQ2_9FUNG1.060e-1552.24PIPK domain-containing protein n=1 Tax=Thamnidium ... [more]
L8H972_ACACA1.470e-1552.94Phosphatidylinositol4 phosphate 5-kinase, putative... [more]
A0A0C9N7G3_9FUNG1.980e-1553.73SAICAR synthase-like protein n=5 Tax=Mucor TaxID=4... [more]
A0A8H7QMA6_9FUNG3.690e-1550.75PIPK domain-containing protein n=1 Tax=Mucor satur... [more]
A0A0B7NEF5_9FUNG3.690e-1552.24PIPK domain-containing protein n=1 Tax=Parasitella... [more]
A0A367JQH5_RHIAZ4.920e-1550.75Phosphatidylinositol-4-phosphate 5-kinase n=4 Tax=... [more]
A0A8H3X408_GIGMA5.060e-1550.75SAICAR synthase-like protein n=1 Tax=Gigaspora mar... [more]
A0A397W1S7_9GLOM6.190e-1550.75PIPK domain-containing protein n=1 Tax=Gigaspora r... [more]
A0A4P9ZLE8_9FUNG9.930e-1547.76PIPK domain-containing protein n=1 Tax=Dimargaris ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112229contigM-pyrifera_M_contig112229:379..582 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score81.6
Seed ortholog evalue1.5e-13
Seed eggNOG ortholog82508.K1VXN6
Preferred nameMSS4
KEGG rclassRC00002,RC00078
KEGG koko:K00889
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05231,map00562,map01100,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05231
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000935,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0007049,GO:0008150,GO:0008152,GO:0008289,GO:0009653,GO:0009987,GO:0010927,GO:0016020,GO:0016043,GO:0016301,GO:0016307,GO:0016308,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030258,GO:0030428,GO:0030435,GO:0030437,GO:0031321,GO:0032153,GO:0032155,GO:0032266,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035091,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044464,GO:0044703,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0052811,GO:0052812,GO:0052813,GO:0070273,GO:0071704,GO:0071840,GO:0071944,GO:1901981,GO:1903046
EggNOG free text desc.Translation initiation factor IF-2, N-terminal region
EggNOG OGs38BAH@33154,3NW6Q@4751,3UYYX@5204,3VE0Y@5234,COG5253@1,KOG0229@2759
EC2.7.1.68
COG Functional cat.T
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons1
Model size204
Cds size204
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815636.2720463-CDS-M-pyrifera_M_contig112229:378..5821622815636.2720463-CDS-M-pyrifera_M_contig112229:378..582Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112229 379..582 -
1692277498.5594478-CDS-M-pyrifera_M_contig112229:378..5821692277498.5594478-CDS-M-pyrifera_M_contig112229:378..582Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112229 379..582 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112229.2563.1prot_M-pyrifera_M_contig112229.2563.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112229 379..582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112229.2563.1

>prot_M-pyrifera_M_contig112229.2563.1 ID=prot_M-pyrifera_M_contig112229.2563.1|Name=mRNA_M-pyrifera_M_contig112229.2563.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
DDGGFRSSDGKDRAMGLVYYMGIIDVLQPYNLRKKVEHALKSLRESPDAL
SCVDPAQYSKRFVDFVMY
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mRNA from alignment at M-pyrifera_M_contig112229:379..582-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112229.2563.1 ID=mRNA_M-pyrifera_M_contig112229.2563.1|Name=mRNA_M-pyrifera_M_contig112229.2563.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig112229:379..582- (Macrocystis pyrifera P11B4 male)
GACGATGGAGGCTTCCGATCTAGCGACGGCAAAGACCGAGCCATGGGCCT
GGTGTACTACATGGGCATCATCGACGTGCTGCAGCCCTACAACCTGCGCA
AGAAGGTCGAGCACGCGCTCAAGAGCCTGCGCGAGTCGCCAGACGCCCTC
TCTTGCGTGGATCCAGCGCAGTACAGCAAGAGATTTGTGGACTTTGTGAT
GTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig112229:379..582-

>mRNA_M-pyrifera_M_contig112229.2563.1 ID=mRNA_M-pyrifera_M_contig112229.2563.1|Name=mRNA_M-pyrifera_M_contig112229.2563.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig112229:379..582- (Macrocystis pyrifera P11B4 male)
GACGATGGAGGCTTCCGATCTAGCGACGGCAAAGACCGAGCCATGGGCCT
GGTGTACTACATGGGCATCATCGACGTGCTGCAGCCCTACAACCTGCGCA
AGAAGGTCGAGCACGCGCTCAAGAGCCTGCGCGAGTCGCCAGACGCCCTC
TCTTGCGTGGATCCAGCGCAGTACAGCAAGAGATTTGTGGACTTTGTGAT
GTACGACGATGGAGGCTTCCGATCTAGCGACGGCAAAGACCGAGCCATGG
GCCTGGTGTACTACATGGGCATCATCGACGTGCTGCAGCCCTACAACCTG
CGCAAGAAGGTCGAGCACGCGCTCAAGAGCCTGCGCGAGTCGCCAGACGC
CCTCTCTTGCGTGGATCCAGCGCAGTACAGCAAGAGATTTGTGGACTTTG
TGATGTAC
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