mRNA_M-pyrifera_M_contig1122.2559.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: D8LRR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRR4_ECTSI) HSP 1 Score: 239 bits (610), Expect = 3.290e-73 Identity = 122/179 (68.16%), Postives = 138/179 (77.09%), Query Frame = 2
Query: 17 KLAASPMDKFMSGLSDMINGESKPEDGEVYSAEAPPGQPAATQDMDGFRSGLIKQTSK---KKQPEFTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTLAGYFDDSYF 544
KL+ASPM+KFMSGL M+ G + + +P QDM FR LI+Q+ K KK+ EFTGYDMYDLIVDKFDVPYDVQINKTV+ GKPVLC N+MWK+LGQSSF LSEQEYLEHLQALAELL EWDRV+ FK ++ADTKKRP YFGYAVALPLDL PDT+ YFDDSYF
Sbjct: 47 KLSASPMEKFMSGLEKMMTGPQLEGSMDTPQEQEQQEEP---QDMSAFRESLIRQSRKDSLKKKEEFTGYDMYDLIVDKFDVPYDVQINKTVWMGKPVLCFNIMWKHLGQSSFPLSEQEYLEHLQALAELLMEWDRVDQFKRSLADTKKRPQSYFGYAVALPLDLDPDTMVDYFDDSYF 222
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: A0A835ZDV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV8_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.090e-42 Identity = 75/132 (56.82%), Postives = 97/132 (73.48%), Query Frame = 2
Query: 149 MDGFRSGLIKQT-SKKKQPEFTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTLAGYFDDSY 541
M FR+ L KQ + + + +F GY + DLIVDK+ P D+QI K VFAGKP+L LNVMWKYLGQ SFHL+E+EYLEHL+A+A+LL +WDRV+H + +KRP YFGYAV+LPLDL PD+L F + +
Sbjct: 1 MASFRATLNKQIKTTQDEDKFDGYKLCDLIVDKWGAPLDIQIKKEVFAGKPLLYLNVMWKYLGQQSFHLNEREYLEHLEAIAQLLHKWDRVDHVIDLIKTCRKRPQAYFGYAVSLPLDLDPDSLLPIFPEEF 132
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: A0A7S0YUK4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YUK4_9CRYP) HSP 1 Score: 147 bits (370), Expect = 7.240e-38 Identity = 74/130 (56.92%), Postives = 90/130 (69.23%), Query Frame = 2
Query: 146 DMDGFRSGLIKQTSKKKQPE------FTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTL 517
DMD FRS L Q +K++ GY + DLIV K+ VPYDVQI + VF GKP+L LNVMWKY GQ SFHL+EQEYLEHLQ +AEL+ +W+RVEH K + D +KRP YFGYAV + LDL D +
Sbjct: 76 DMDAFRSMLSDQWNKEEVAVAEDDGLLDGYKLRDLIVAKWGVPYDVQIQRGVFLGKPLLFLNVMWKYYGQQSFHLTEQEYLEHLQFIAELINKWERVEHVKKVIDDCQKRPAGYFGYAVPIALDLPADVM 205
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: A0A7S0XWG0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWG0_HEMAN) HSP 1 Score: 147 bits (372), Expect = 1.070e-37 Identity = 75/130 (57.69%), Postives = 91/130 (70.00%), Query Frame = 2
Query: 146 DMDGFRSGLIKQTSKKKQPE------FTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTL 517
DMD FRS L Q +K++ GY + DLIV K+ VPYDVQI + VF GKP+L LNVMWK+ GQ SFHL+EQEYLEHLQ +AELL +W+RV+H K +AD KKRP YFGYAV + LDL D +
Sbjct: 99 DMDAFRSMLSDQWNKEEVAVVEDDGLLDGYKLRDLIVAKWGVPYDVQIQRGVFLGKPLLFLNVMWKHYGQQSFHLTEQEYLEHLQFIAELLNKWERVDHVKKLIADCKKRPAGYFGYAVPIALDLPADIM 228
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: L1IPD9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IPD9_GUITC) HSP 1 Score: 138 bits (348), Expect = 8.360e-35 Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 2
Query: 149 MDGFRSGLIKQTSKKKQPE---FTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTL 517
++ FRS L++Q+ K K+ E F GY DLIV+K+ VPYDVQI + F GKP++ NVMWK+ GQ SF L+E EYLEHLQ LAEL +WDRV+ K +A +KRPN YFGYAVALPLDL + +
Sbjct: 72 IEAFRS-LMQQSWKGKKSESKEFDGYAFRDLIVEKWGVPYDVQIKREYFLGKPMIFFNVMWKWCGQQSFPLTETEYLEHLQFLAELCVKWDRVDLLKEEIAKCRKRPNGYFGYAVALPLDLPQEVM 196
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: W7TIL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIL0_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.790e-27 Identity = 54/137 (39.42%), Postives = 90/137 (65.69%), Query Frame = 2
Query: 131 PAATQDMDGFRSGLIKQTSKKKQ-PEFTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTLAGYFDDS 538
P + M +R +++ ++K E GY ++D+IV K+ VPY V++ + FAGK +L +NVMWKYLGQ SF L+E++YLEHL+ ++ L +W +V FK +A+ +K+PN YFGYAV+ + ++ + + +D+
Sbjct: 53 PDGSPSMQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDA 189
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: A0A4D9CNG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNG2_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.230e-26 Identity = 52/131 (39.69%), Postives = 87/131 (66.41%), Query Frame = 2
Query: 149 MDGFRSGLIKQTSKKKQ-PEFTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDLAPDTLAGYFDDS 538
M +R +++ ++K E GY ++D+IV K+ VPY V++ + FAGK +L +NVMWKYLGQ SF L+E++YLEHL+ ++ L +W +V FK + + +K+PN YFGYAV+ + ++ + + +D+
Sbjct: 1 MQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLTECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDA 131
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: A0A0F6U1J0_MICAE (Uncharacterized protein n=69 Tax=Chroococcales TaxID=1118 RepID=A0A0F6U1J0_MICAE) HSP 1 Score: 86.7 bits (213), Expect = 4.910e-17 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 2
Query: 209 TGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDL 502
TG D+ L+++K+ YD+Q+ + K + + VMWKYL Q+SF LSE EYLEHL A+A L EW V F++ + +T++RP G AV+LPLDL
Sbjct: 2 TGVDLQQLLLEKWGRSYDIQLRRI----KDKVHVQVMWKYLEQASFPLSESEYLEHLNAIANYLHEWGGVSQFQAFIRETRERPR--LGKAVSLPLDL 93
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: K9S5U4_9CYAN (Uncharacterized protein n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S5U4_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 9.230e-17 Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 2
Query: 209 TGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDL 502
TG +++ L+V+K+ YD+Q+ +T GK + + VMWKYL Q+SF ++E EY HL+A+A LQ W VE +S +A TK+RP G AV++PLDL
Sbjct: 2 TGLELHQLLVEKWGRSYDIQLRRT--QGK--IFVQVMWKYLEQASFPMTETEYFSHLEAIAAYLQAWGGVEQIQSYIATTKERPR--LGKAVSIPLDL 93
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Match: A0A8B8LED1_ABRPR (uncharacterized protein LOC113864296 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8LED1_ABRPR) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-16 Identity = 53/155 (34.19%), Postives = 88/155 (56.77%), Query Frame = 2
Query: 50 SGLSDMINGESKPEDGEVYSAEAPPGQPAATQDMDGFRSGLIKQTSKK----KQPEFTGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCLNVMWKYLGQSSFHLSEQEYLEHLQALAELLQEWDRVEHFKSAVADTKKRPNPYFGYAVALPLDL 502
S +SD +N P D + P + +M G S +++++ +K F+G+D+ LI +K+ YDVQ+ K F G+ +L LNVMWKY+ Q SF L+E+EY+ L +A L+ W V H ++++A +K+RP G AV++ +D+
Sbjct: 64 SSVSDSMN----PSDSDDIDKNKP-----QSDEMGGVNSEMLRESLEKIVGTDDSTFSGFDLATLIRNKYGRSYDVQLIKKEFMGRNLLALNVMWKYMEQRSFPLTEEEYILRLDDVANTLKCWGAVSHIRNSLAKSKERPR--IGKAVSIFIDM 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1122.2559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1122.2559.1 >prot_M-pyrifera_M_contig1122.2559.1 ID=prot_M-pyrifera_M_contig1122.2559.1|Name=mRNA_M-pyrifera_M_contig1122.2559.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MDKFMSGLSDMINGESKPEDGEVYSAEAPPGQPAATQDMDGFRSGLIKQTback to top mRNA from alignment at M-pyrifera_M_contig1122:17158..21376+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1122.2559.1 ID=mRNA_M-pyrifera_M_contig1122.2559.1|Name=mRNA_M-pyrifera_M_contig1122.2559.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4219bp|location=Sequence derived from alignment at M-pyrifera_M_contig1122:17158..21376+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1122:17158..21376+ >mRNA_M-pyrifera_M_contig1122.2559.1 ID=mRNA_M-pyrifera_M_contig1122.2559.1|Name=mRNA_M-pyrifera_M_contig1122.2559.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig1122:17158..21376+ (Macrocystis pyrifera P11B4 male)back to top |