mRNA_M-pyrifera_M_contig112100.2541.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A0F9XNL4_9ZZZZ (MFS domain-containing protein n=27 Tax=root TaxID=1 RepID=A0A0F9XNL4_9ZZZZ) HSP 1 Score: 369 bits (947), Expect = 8.340e-126 Identity = 187/195 (95.90%), Postives = 193/195 (98.97%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGL+EWLGWAAA MAMAAIATIIIPLGAMLRD PSAKT+SDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTW+YLIRGVVITAFV+LPLSP+SAYLFGI+MGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLIEWLGWAAAFMAMAAIATIIIPLGAMLRDKPSAKTSSDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWIYLIRGVVITAFVFLPLSPISAYLFGIIMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: UPI001EF0BDDE (MFS transporter n=1 Tax=Halomonas profundi TaxID=2852117 RepID=UPI001EF0BDDE) HSP 1 Score: 346 bits (888), Expect = 7.510e-117 Identity = 172/195 (88.21%), Postives = 187/195 (95.90%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGL+EWLGWAAAL+AMAAIA +IIPLGAMLRD P+ KTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFD GLAVQVGTTVLAL+GLFN+ GTY AGWMGGIWSKP+LLTWLYL+RGVVI+AF++LPLS +SAY FGI++G+LWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLIEWLGWAAALIAMAAIAALIIPLGAMLRDKPTTKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDNGLAVQVGTTVLALIGLFNVFGTYIAGWMGGIWSKPRLLTWLYLLRGVVISAFLFLPLSAISAYAFGIIIGVLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A0D7V4N2_9GAMM (MFS transporter n=27 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0D7V4N2_9GAMM) HSP 1 Score: 340 bits (872), Expect = 2.010e-114 Identity = 170/195 (87.18%), Postives = 183/195 (93.85%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGL+EWLGW++AL+AM AIA ++IPLGAML+D PS K DLSL+DALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFD GLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKP+LL+WLYLIRGV+ITAF+ LPL+ SAYLFGI MGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLIEWLGWSSALLAMGAIAALMIPLGAMLKDRPSPKALGDLSLRDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDNGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPRLLSWLYLIRGVIITAFIALPLTTTSAYLFGIAMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A060BGS8_9GAMM (MFS transporter n=17 Tax=Halomonas TaxID=2745 RepID=A0A060BGS8_9GAMM) HSP 1 Score: 333 bits (854), Expect = 1.080e-111 Identity = 166/195 (85.13%), Postives = 179/195 (91.79%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGL+EWLGW+AAL+AM AIA ++IPLGA+L+D PS DLSL+DALNEA GQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFD GLA+QVGTTVLALVGLFNIVGTYTAGWMGGIWSKP+LL+WLYLIRG +I AFV LPL+ SAYLFGI MGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLIEWLGWSAALLAMGAIAALMIPLGAILKDRPSPSALGDLSLRDALNEAVGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDNGLAIQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPRLLSWLYLIRGAIIAAFVMLPLTSTSAYLFGIAMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: H0IXL3_9GAMM (Putative transporter n=1 Tax=Halomonas sp. GFAJ-1 TaxID=1118153 RepID=H0IXL3_9GAMM) HSP 1 Score: 331 bits (849), Expect = 6.180e-111 Identity = 163/195 (83.59%), Postives = 180/195 (92.31%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGL+EWLGWAAAL+AM AIA +IPLGAML+D+P+ K+ DLSL+ ALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFD GL++Q+GTTVLALVGLFNIVGTY AGW+GGIWSKP+LL+WLYL+RG +I AF+ LPLS SAYLFGI MGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLIEWLGWAAALLAMGAIAAFMIPLGAMLKDSPTPKSLGDLSLRGALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDNGLSIQIGTTVLALVGLFNIVGTYMAGWLGGIWSKPRLLSWLYLVRGAIIAAFIVLPLSSTSAYLFGIAMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A368TX49_9GAMM (MFS transporter n=2 Tax=Halomonas TaxID=2745 RepID=A0A368TX49_9GAMM) HSP 1 Score: 320 bits (820), Expect = 1.490e-106 Identity = 161/195 (82.56%), Postives = 176/195 (90.26%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGLLEWLGW+AAL+AM +A +++PLGAMLRD P A A DLSLK ALNEAAGQ+GFW+LCLGFFVCGFQVVFIAVHLP YLFD GLA+QVGTTVLALVGLFN+ GTY AGW+GG +SKP LL+WLYLIRG VI AFV+LPLSP SAYLFGI +GLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLLEWLGWSAALLAMGCMAALMVPLGAMLRDRPMAHQAGDLSLKAALNEAAGQRGFWMLCLGFFVCGFQVVFIAVHLPSYLFDNGLAIQVGTTVLALVGLFNVFGTYLAGWLGGHFSKPHLLSWLYLIRGGVIAAFVFLPLSPTSAYLFGIAIGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A2N7UQP2_9GAMM (MFS transporter n=1 Tax=Halomonas urumqiensis TaxID=1684789 RepID=A0A2N7UQP2_9GAMM) HSP 1 Score: 320 bits (819), Expect = 2.180e-106 Identity = 158/195 (81.03%), Postives = 176/195 (90.26%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGLLEWLGW+AAL+ M IA +I+PLGAMLRD PS +T SD+SL+ AL+EAAG +GFWLLCLGFFVCGFQVVFI VHLPGYLFD G+AVQVG+TVLALVGLFNI GTY AGW+GGI+SKP+LL+WLYL+RGVVIT F+ PLSP S YLFGI +GLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLLEWLGWSAALLVMGGIAALILPLGAMLRDRPSPRTGSDISLRAALDEAAGHRGFWLLCLGFFVCGFQVVFIGVHLPGYLFDNGVAVQVGSTVLALVGLFNIFGTYAAGWLGGIYSKPRLLSWLYLVRGVVITLFIVFPLSPASCYLFGIAIGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A7Z0LLW4_9GAMM (MFS transporter n=1 Tax=Halomonas salicampi TaxID=1449798 RepID=A0A7Z0LLW4_9GAMM) HSP 1 Score: 320 bits (820), Expect = 2.310e-106 Identity = 160/195 (82.05%), Postives = 177/195 (90.77%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGLLEWLGW+AAL+AM AIA ++IP GA LRDTPS + A+DL+LKDALNEAAGQKGFW+LCLGFFVCGFQVVFIAVHLPGYLFD GL V+VG+TVLALVGLFNI GTY AGW+GG SKP+LL+WLY+IRG VI AFV++PLS S YLFGI +GLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 170 LGLLEWLGWSAALLAMGAIAALMIPFGAFLRDTPSPRGATDLTLKDALNEAAGQKGFWMLCLGFFVCGFQVVFIAVHLPGYLFDNGLPVEVGSTVLALVGLFNIFGTYLAGWLGGFISKPRLLSWLYIIRGAVIAAFVFMPLSTFSTYLFGIAIGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 364
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A318L802_9GAMM (MFS transporter n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A318L802_9GAMM) HSP 1 Score: 316 bits (810), Expect = 5.030e-105 Identity = 157/195 (80.51%), Postives = 177/195 (90.77%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGLLEWLGW+AAL+ M A+A +++PLG MLRD PS + SD+SL+ AL+EAAG++GFWLLCLGFFVCGFQVVFI VHLPGYLFD G+AV VG+TVLALVGLFNI+GTYTAGW+GG +SK +LLTWLYLIRGVVITAF+ PLSP SAYLFGI MGLLWLSTVPLTNGIVA+VFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLLEWLGWSAALLVMGALAALMVPLGGMLRDRPSPRQDSDISLRAALDEAAGRRGFWLLCLGFFVCGFQVVFIGVHLPGYLFDNGIAVHVGSTVLALVGLFNILGTYTAGWLGGHFSKSRLLTWLYLIRGVVITAFIVFPLSPASAYLFGIAMGLLWLSTVPLTNGIVAAVFGVRHLSMLGGIVFLFHQLGSFM 351
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Match: A0A1J0VC66_9GAMM (MFS transporter n=1 Tax=Halomonas aestuarii TaxID=1897729 RepID=A0A1J0VC66_9GAMM) HSP 1 Score: 315 bits (807), Expect = 1.430e-104 Identity = 158/195 (81.03%), Postives = 176/195 (90.26%), Query Frame = 1
Query: 1 LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEAAGQKGFWLLCLGFFVCGFQVVFIAVHLPGYLFDKGLAVQVGTTVLALVGLFNIVGTYTAGWMGGIWSKPKLLTWLYLIRGVVITAFVYLPLSPVSAYLFGIVMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 585
LGLLEWLGW+AAL+AM A+A +++PLG MLRD PS + ASDLSL+ AL+EAAG +GFWLLCLGFFVCGFQVVFI VHLPGYL D G+AVQV +TVLALVGLFNIVGTY+AGW+GG +SKP+LLTWLYLIRG VIT F+ +PLS SAYLFGI MGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM
Sbjct: 157 LGLLEWLGWSAALLAMGALAALMVPLGGMLRDRPSPRQASDLSLRAALDEAAGHRGFWLLCLGFFVCGFQVVFIGVHLPGYLADNGIAVQVSSTVLALVGLFNIVGTYSAGWLGGHFSKPRLLTWLYLIRGAVITVFIAMPLSTASAYLFGIAMGLLWLSTVPLTNGIVASVFGVRHLSMLGGIVFLFHQLGSFM 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112100.2541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112100.2541.1 >prot_M-pyrifera_M_contig112100.2541.1 ID=prot_M-pyrifera_M_contig112100.2541.1|Name=mRNA_M-pyrifera_M_contig112100.2541.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp LGLLEWLGWAAALMAMAAIATIIIPLGAMLRDTPSAKTASDLSLKDALNEback to top mRNA from alignment at M-pyrifera_M_contig112100:2..586- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112100.2541.1 ID=mRNA_M-pyrifera_M_contig112100.2541.1|Name=mRNA_M-pyrifera_M_contig112100.2541.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig112100:2..586- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112100:2..586- >mRNA_M-pyrifera_M_contig112100.2541.1 ID=mRNA_M-pyrifera_M_contig112100.2541.1|Name=mRNA_M-pyrifera_M_contig112100.2541.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig112100:2..586- (Macrocystis pyrifera P11B4 male)back to top |