mRNA_M-pyrifera_M_contig112088.2537.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A7M2WWI2_9BACT (Beta-lactamase family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WWI2_9BACT) HSP 1 Score: 184 bits (466), Expect = 1.640e-53 Identity = 99/201 (49.25%), Postives = 134/201 (66.67%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVSGHGK-----AEVFYP-NSNGYNMTARDSAGGLAASAPALCQFLDAYWISGDVRPQ--RGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D RL IT+ HLL H+GGWDR A FDPM+R + ++K + L++ T+ VI+YML +PLQ +PGEK YSNFGY VLGRVIEK TGQ Y V+ I EPL +++ V + AEV+YP + +++ D+ GG+ ASAPALC+FL AYWISG+ RP +G W + GS+ TT+ +M QR DG++ AV+ N R
Sbjct: 153 DPRLADITIGHLLQHKGGWDRGAAFDPMFRTRDVEKTLGLTQPATAGDVIRYMLGKPLQFAPGEKSVYSNFGYCVLGRVIEKATGQTYEAVLKHTITEPLKIADLKVGRNSSKQRDPAEVYYPVRDDAFSLDIMDAHGGIIASAPALCRFLQAYWISGEPRPAGAKGQKWVF-FGSLPGTTAMVM-QRSDGMDVAVLVNHR 351
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: UPI0019A80C7D (Beta-lactamase family protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019A80C7D) HSP 1 Score: 177 bits (449), Expect = 5.400e-51 Identity = 94/199 (47.24%), Postives = 128/199 (64.32%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVS-----GHGKAEVFYPNS-NGYNMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D + ++ITV LL+H+GGWD A+FDPM+R K I++E+ L VI+YML Q LQ +PGEK YSNFG+ VLGRV+EK T + Y + V + +PLG ++ + K EV+YP + + +++ DS GGL ASAPALCQF+DAYWI+GD R Q + GS+ TT AL+ QR DG+N AV+ N R
Sbjct: 152 DPKFNSITVGQLLEHKGGWDEGASFDPMFRTKRIEQELRLRHPAKPEDVIKYMLGQSLQFTPGEKTVYSNFGFCVLGRVLEKATKKPYANCVQQTVCKPLGIKDIKLGYSALKKRDKREVWYPVAEDAFSLEVLDSLGGLIASAPALCQFMDAYWINGDPRLQGQRGDWIFFGSLPGTT-ALVRQRDDGVNIAVLLNGR 349
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A847GGJ8_9BACT (Beta-lactamase family protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GGJ8_9BACT) HSP 1 Score: 171 bits (432), Expect = 4.880e-49 Identity = 86/200 (43.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVSG-----HGKAEVFYPNSNG-YNMTARDSAGGLAASAPALCQFLDAYWISGDVR-PQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D RL+ ITV+HLL+H+GGWDR +FDPM+ ++K + L + V+++ML QPLQ PG + YSNFG+ VLGRV+EK G Y++ + + + +P +++ + GK EV YP +G +++ D+ GGL ASAPALC+F+D YWISG +R P+ W + GS+ T S + QR DG+N A +FN+R
Sbjct: 100 DPRLEQITVAHLLEHKGGWDRGKSFDPMFMTGRVEKSLRLERSARPEDVVRFMLGQPLQFDPGAESVYSNFGFCVLGRVLEKKLGMPYMECIRTLVLDPASITDIELGRDSALKRGKREVEYPVRDGLFSIEVMDAHGGLIASAPALCRFMDVYWISGFLRKPEESQDWTF-FGSLPGTLS-MARQRKDGLNVAALFNSR 297
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: UPI001424A033 (serine hydrolase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001424A033) HSP 1 Score: 170 bits (431), Expect = 1.610e-48 Identity = 95/199 (47.74%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHV--SGHGKA---EVFYP-NSNGYNMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D RL IT+ HLL H+GGWDR+ FDPM++ I + +T+ V++YM QPLQ +PGEK YSNFGY VLGRV+EKT + +I V+ +FEP EV + S GK EV YP + + + D+ GG+ ASAPALC+FLDAYWISG+ R Y GS+ TT A+ QR DG N AV+ NAR
Sbjct: 132 DPRLKNITIGHLLKHEGGWDRDIGFDPMFQGVRILQTAQPDANITASDVVEYMWQQPLQFTPGEKSVYSNFGYCVLGRVLEKTYDKPFIKVMQKLVFEPKTIDEVRLGTSDSGKRPQNEVEYPIRDSAFLLDVMDAHGGMIASAPALCRFLDAYWISGEPREPGPSYRYTFFGSLPGTT-AMARQRSDGFNIAVLLNAR 329
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A5C5XKJ4_9PLAN (Esterase EstB n=1 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5XKJ4_9PLAN) HSP 1 Score: 162 bits (411), Expect = 1.700e-45 Identity = 82/198 (41.41%), Postives = 120/198 (60.61%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVSGHGKAEVFYPNSNGY-----NMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D R +TV+HLL H+GGWDR+ TFDPM+R + ++++ L K +I++ML +PLQ PG + +YSNFGY +LGRV+EK +G Y V ++F+PLG ++ G + + P Y + DS GGL ASAPALC++++ YW+ G +R + W Y GS+ TT A+ QR+DG N V+ N R
Sbjct: 136 DPRWRDVTVAHLLKHEGGWDRDETFDPMFRAREVEQQYRLRGKAQPEDMIRFMLAKPLQFDPGSRSSYSNFGYCLLGRVVEKASGMPYQKYVQEKLFDPLGIKDIQ-QGRDRPRDWDPREVEYPIKTLRVEVMDSHGGLIASAPALCKYMEQYWLDGKLRNPQRYYWTY-FGSLPGTT-AMALQRIDGFNVVVLCNGR 330
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A356AE52_9PLAN (Beta-lactamase domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356AE52_9PLAN) HSP 1 Score: 162 bits (410), Expect = 2.390e-45 Identity = 84/198 (42.42%), Postives = 119/198 (60.10%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVSGHGKAEVFYPNSNGY-----NMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D R ITV+ LL H+GGWDR+ TFDPM+R + ++K+ L K +I+YML +PLQ PG + +YSNFGY +LGRV+EK +G Y V ++F+PLG ++ G + + P Y + DS GGL ASAPALC++++ YW+ G +R + W Y GS+ TT A+ QR+DG N V+ N R
Sbjct: 136 DPRWRDITVAQLLKHEGGWDRDETFDPMFRTREVEKQYRLRGKAQPEDMIRYMLAKPLQFDPGSRSSYSNFGYCLLGRVVEKGSGMPYQKYVQQKLFDPLGIKDIQ-QGRDRPRDWDPREVEYPLQTLRVEVMDSHGGLIASAPALCKYMEHYWLDGKLRNSQRYYWTY-FGSLPGTT-AMALQRIDGFNVVVLCNGR 330
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A2E9VNJ8_9PLAN (Beta-lactamase domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VNJ8_9PLAN) HSP 1 Score: 159 bits (403), Expect = 4.890e-44 Identity = 82/198 (41.41%), Postives = 119/198 (60.10%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVSGHGKAEVFYPNSNGY-----NMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D R ITV+HLL H+GGWDR+ TFDPM+R + ++K+ L K +I+YML +PLQ PG + +YSNFGY +LGRV+EK +G Y + + ++F+PL ++ G + + P Y + DS GGL ASAPAL ++++ YW+ G +R + W Y GS+ TT A+ QR+DG N V+ N R
Sbjct: 164 DSRWRDITVAHLLKHEGGWDRDETFDPMFRTREVEKQYRLRGKAQPEDMIRYMLAKPLQFDPGSRSSYSNFGYCLLGRVVEKASGMTYQNYIQQKLFDPLRIKDIQ-QGRDRPRDWDPREVEYPIKTLRVEVMDSHGGLIASAPALSKYMEHYWLDGKLRNPQRYYWTY-FGSLPGTT-AMALQRIDGFNVVVLCNGR 358
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A7G9P413_9BACT (Beta-lactamase family protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9P413_9BACT) HSP 1 Score: 150 bits (378), Expect = 5.960e-41 Identity = 84/197 (42.64%), Postives = 122/197 (61.93%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVSGHGKA-----EVFYPNSNGYNMTAR-DSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFN 573
D RL ITV HLL+H+GGWDR ++DPM+ I+K +HL + T+ +I++ML++PLQ PG++ AYSNFGY +LGR+IE+ +G+ YID V + I PL S + ++ A E YP + T R D+ GG+ A+AP LC+FL AY + G +R GSM TT A++ R DG++ A++FN
Sbjct: 104 DGRLANITVDHLLNHRGGWDRAQSYDPMFHDAAIRKRLHLDRAPTADDIIRFMLSEPLQFDPGQRYAYSNFGYCLLGRIIERVSGKPYIDCVKAIIARPLDMSSLTLARTDPALRNPREPHYPTGSMTLHTERMDAHGGMIATAPDLCRFLTAYQLDGRPITRRPGLDDAFFGSMPGTT-AMVRHRPDGLDIAILFN 299
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A517S820_9PLAN (Esterase EstB n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517S820_9PLAN) HSP 1 Score: 147 bits (370), Expect = 9.740e-38 Identity = 90/223 (40.36%), Postives = 115/223 (51.57%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFD-------PMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEVHVS-----GHGKAEVFY------PNS------------NGYNMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D+R + +TV LL H+GGWDR+ D PM+ I KE+H S L R I +M QPLQ PGEK AYSNFGY +LGRV E+ TGQ Y+D + I +PLG +++ ++ E Y PN+ Y A DS GGL ASAP L + LDAYWI G R Y H+GS+ S ++ QR DG+N FN R
Sbjct: 386 DDRWNDVTVEMLLKHRGGWDRKVAIDGHPDGLDPMFEHVLIAKELHRSPPLKPRDFIDFMAGQPLQFQPGEKYAYSNFGYCLLGRVAEQVTGQTYVDALQKEILKPLGATDIELARSRPDDRNPREPVYRDPGESPNALTAAGESVRAADGSYIAEALDSHGGLIASAPHLLKVLDAYWIDGPPRRPGERREYRHLGSLPGNFSVMI-QRQDGVNIVCNFNQR 607
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Match: A0A075K9I2_9FIRM (Beta-lactamase n=1 Tax=Pelosinus sp. UFO1 TaxID=484770 RepID=A0A075K9I2_9FIRM) HSP 1 Score: 141 bits (355), Expect = 5.840e-37 Identity = 79/217 (36.41%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 1 DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIQYMLTQPLQLSPGEKRAYSNFGYVVLGRVIEKTTGQKYIDVVHSRIFEPLGTSEV-------------HVSGHG-----------KAEVFYPNSNGYNMTARDSAGGLAASAPALCQFLDAYWISGDVRPQRGVSWYYHMGSMTNTTSALMEQRLDGINYAVMFNAR 579
D R + IT+SHL+ H+GGWD +A FDPM+ +K I EM L+ + + +M++QPLQ +PGEK AYSNFGY +LG +IE+ TG+ Y D +++ + PLG +V V + + +V+ P+ G+ + D+ G L AS +L +F YW+ G++R + H GS+ T S L+ R G N AV+FN R
Sbjct: 140 DPRWEDITISHLIYHKGGWDSQAAFDPMFSMKKISNEMGLNGLPSISDIAAFMMSQPLQYNPGEKYAYSNFGYALLGIIIEQVTGKSYYDYLYTVVLHPLGLEDVKPGYSLPEKRDSNEVGWYSDPFITQSLFDQRKDVYLPD-GGFYLENLDANGRLIASTESLVKFAQVYWLKGEIRNPGEKQQWIHTGSLPGTASILL-WRATGTNIAVIFNQR 354 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112088.2537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112088.2537.1 >prot_M-pyrifera_M_contig112088.2537.1 ID=prot_M-pyrifera_M_contig112088.2537.1|Name=mRNA_M-pyrifera_M_contig112088.2537.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp DERLDTITVSHLLDHQGGWDREATFDPMYRLKYIQKEMHLSKKLTSRRVIback to top mRNA from alignment at M-pyrifera_M_contig112088:2..580- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112088.2537.1 ID=mRNA_M-pyrifera_M_contig112088.2537.1|Name=mRNA_M-pyrifera_M_contig112088.2537.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig112088:2..580- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112088:2..580- >mRNA_M-pyrifera_M_contig112088.2537.1 ID=mRNA_M-pyrifera_M_contig112088.2537.1|Name=mRNA_M-pyrifera_M_contig112088.2537.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig112088:2..580- (Macrocystis pyrifera P11B4 male)back to top |