mRNA_M-pyrifera_M_contig112077.2533.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A2E7K6T9_9PLAN (Uncharacterized protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E7K6T9_9PLAN) HSP 1 Score: 258 bits (658), Expect = 4.480e-81 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1
Query: 1 RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL 414
RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL
Sbjct: 434 RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL 571
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A517WAW9_9PLAN (Cobalt-zinc-cadmium resistance protein CzcC n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WAW9_9PLAN) HSP 1 Score: 246 bits (629), Expect = 6.990e-77 Identity = 130/138 (94.20%), Postives = 136/138 (98.55%), Query Frame = 1
Query: 1 RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL 414
RELERVRLVLRDQLISSYRDYMLARNQAEQMR+EVLP+LREALELMIKGYE GQFSFLAVLN QQ+NFQSNLEYIDALNRAHRL+VEISGLQMTGGLNPATIGTAIQ++GGGGRLRAVQQQLQKQSNANLSNFAPAAL
Sbjct: 421 RELERVRLVLRDQLISSYRDYMLARNQAEQMREEVLPDLREALELMIKGYENGQFSFLAVLNAQQNNFQSNLEYIDALNRAHRLSVEISGLQMTGGLNPATIGTAIQESGGGGRLRAVQQQLQKQSNANLSNFAPAAL 558
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A517X9H5_9PLAN (Cobalt-zinc-cadmium resistance protein CzcC n=4 Tax=Gimesia maris TaxID=122 RepID=A0A517X9H5_9PLAN) HSP 1 Score: 246 bits (627), Expect = 1.360e-76 Identity = 130/138 (94.20%), Postives = 136/138 (98.55%), Query Frame = 1
Query: 1 RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL 414
RELERVRLVLRDQLISSYRDYMLARNQ+EQMRKEVLP+LREALELMIKGYEKG+FSFLAVLN QQ+NFQSNLEYIDALNRAHRL+VEISGLQMTGGLNPATIGTAIQ+AGGG RLRAVQQQLQKQSNANLSNFAPAAL
Sbjct: 420 RELERVRLVLRDQLISSYRDYMLARNQSEQMRKEVLPDLREALELMIKGYEKGEFSFLAVLNAQQNNFQSNLEYIDALNRAHRLSVEISGLQMTGGLNPATIGTAIQEAGGGERLRAVQQQLQKQSNANLSNFAPAAL 557
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A518FVW5_9PLAN (Cobalt-zinc-cadmium resistance protein CzcC n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FVW5_9PLAN) HSP 1 Score: 236 bits (601), Expect = 9.670e-73 Identity = 122/137 (89.05%), Postives = 133/137 (97.08%), Query Frame = 1
Query: 4 ELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL 414
ELERV+LVLRDQLI+SYR+YMLARNQAEQMRKEVLP+L++ALELMIKGYE GQFS+LAVLN QQ+NFQSNLEYID+LNRAHRLA+EISGLQMTGGLNPATIGTAIQ+ GGGGRLRAVQQQLQKQS ANLSNFAPAAL
Sbjct: 418 ELERVKLVLRDQLITSYRNYMLARNQAEQMRKEVLPDLKQALELMIKGYENGQFSYLAVLNAQQNNFQSNLEYIDSLNRAHRLAIEISGLQMTGGLNPATIGTAIQEVGGGGRLRAVQQQLQKQSGANLSNFAPAAL 554
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A7W0RRT6_9PLAN (TolC family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0RRT6_9PLAN) HSP 1 Score: 125 bits (314), Expect = 5.260e-31 Identity = 71/138 (51.45%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 1 RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGGRLRAVQQQLQKQSNANLSNFAPAAL 414
+ELERV+LVLRDQL +S RDY ARN+ E + + +LP + +EL K YE G+F F V Q + + L ++A ++A + +V I+GLQ+TGGLNPA+IGTAIQD+GGG R RAVQ L + N NL+ FAP AL
Sbjct: 409 KELERVKLVLRDQLAASLRDYAQARNEVEILSERILPAAMKNVELTAKAYEIGEFDFARVSASQSALQDAQLRLVEAQSKARQFSVAITGLQLTGGLNPASIGTAIQDSGGGQR-RAVQAALDQTRNGNLNTFAPGAL 545
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A5C7U1X8_RHISP (TolC family protein (Fragment) n=1 Tax=Rhizobium sp. TaxID=391 RepID=A0A5C7U1X8_RHISP) HSP 1 Score: 101 bits (251), Expect = 9.220e-24 Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 4 ELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGGGG--RLRAVQQQLQKQSNANL 390
E+ RV+LVLRDQ+ S+R Y + Q E++++ +LP E L+L + Y G+ +F VL QQS F+S + Y++A+ H++ EI+GLQ+TGGLNPA IG+AIQ GG R RA+ ++Q ++ L
Sbjct: 96 EIRRVQLVLRDQMADSFRRYQSSLRQTERLKQAILPNTEENLKLATQLYVAGETAFTPVLLAQQSYFESRVAYVEAVTELHKVVTEINGLQLTGGLNPAAIGSAIQTQPGGSAQRQRALLNEVQDRAAKQL 226
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A3E0NW49_9BACT (TolC family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NW49_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 5.890e-13 Identity = 40/96 (41.67%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 4 ELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGL 291
E+ RV L LR++L ++Y Y ARNQ ++ ++LP+ R+AL+L+ KGY++ QFSFL +L Q++ +++L Y+ AL ++ V I GL +TG L
Sbjct: 359 EVARVELSLRNRLATAYETYSNARNQVDKYVNDILPDSRKALDLITKGYQEKQFSFLTLLTAQRTYARASLAYLQALQQSGVSRVAIEGLLLTGSL 454
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A3M1VFK0_9BACT (TolC family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1VFK0_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 5.300e-12 Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 1 RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGLNPATIGTAIQDAGG 333
RE+ERVRL LR +L +Y+D+ AR Q + ++ +LP L+L +GY +G+F FL VL +++ FQ +L+YI A V + GL + G L GT + GG
Sbjct: 415 REVERVRLSLRQRLADAYQDFEQARRQVLRYQRALLPAAERNLKLAEEGYRQGEFDFLTVLTARRTFFQVHLQYITAWTTLRTAQVTLDGLLLRGALETTPPGTQLGTLGG 525
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A3B9D1X3_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D1X3_9PLAN) HSP 1 Score: 71.6 bits (174), Expect = 6.750e-12 Identity = 37/96 (38.54%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 4 ELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGLQMTGGL 291
E+ +V L L+DQL +S++ Y+ AR Q E+ R++++P +++L+L+ GY++GQ +LAVL Q++ + NL YIDAL+ I G ++G L
Sbjct: 329 EVRQVELRLKDQLATSWKRYLNARQQVERYRQQMVPRAKQSLKLVTDGYDQGQVQYLAVLTAQETFLRVNLRYIDALSELRAATSLIEGRLLSGSL 424
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Match: A0A286RKH1_9BACT (Heavy metal RND efflux outer membrane protein, CzcC family n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A286RKH1_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 7.070e-12 Identity = 38/92 (41.30%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 7 LERVRLV---LRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYEKGQFSFLAVLNVQQSNFQSNLEYIDALNRAHRLAVEISGL 273
LERVR V LRDQL +++R+Y AR + ++ +++LP +REA+EL ++GY G +L VL Q+S ++ L+Y+ +L A + A +ISG+
Sbjct: 372 LERVRQVQEELRDQLATAFREYSAARKRVQRYEQDILPRVREAVELAMQGYTGGVMEYLRVLEAQRSEIETRLDYLASLGDAWQAAAQISGI 463 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112077.2533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112077.2533.1 >prot_M-pyrifera_M_contig112077.2533.1 ID=prot_M-pyrifera_M_contig112077.2533.1|Name=mRNA_M-pyrifera_M_contig112077.2533.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp RELERVRLVLRDQLISSYRDYMLARNQAEQMRKEVLPELREALELMIKGYback to top mRNA from alignment at M-pyrifera_M_contig112077:3..419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112077.2533.1 ID=mRNA_M-pyrifera_M_contig112077.2533.1|Name=mRNA_M-pyrifera_M_contig112077.2533.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig112077:3..419+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112077:3..419+ >mRNA_M-pyrifera_M_contig112077.2533.1 ID=mRNA_M-pyrifera_M_contig112077.2533.1|Name=mRNA_M-pyrifera_M_contig112077.2533.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig112077:3..419+ (Macrocystis pyrifera P11B4 male)back to top |