mRNA_M-pyrifera_M_contig112072.2529.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A517PPZ7_9PLAN (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A517PPZ7_9PLAN) HSP 1 Score: 345 bits (886), Expect = 6.570e-107 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD
Sbjct: 4435 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 4614
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A5A8B8E6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8B8E6_9PLAN) HSP 1 Score: 332 bits (850), Expect = 4.550e-102 Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
ASN S+RFNEMRNIRSTNA+IFVDDSEAI IEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSN+VVSGN+V+GSSSNNG IYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGK PSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWG+TD
Sbjct: 4435 ASNSSIRFNEMRNIRSTNAAIFVDDSEAITIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNVVVSGNDVSGSSSNNGVIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKNPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGTTD 4614
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A517WE77_9PLAN (Uncharacterized protein n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WE77_9PLAN) HSP 1 Score: 330 bits (846), Expect = 1.570e-101 Identity = 169/180 (93.89%), Postives = 175/180 (97.22%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
ASN S+RFNEMRNIRSTNA+IFVDDSEAI IEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSN+VVSGN+V+GSSSNNG IYVSETVDNVEITNNLIHDN AAVSGTDTNYAIRIGK PSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWG+TD
Sbjct: 2666 ASNSSIRFNEMRNIRSTNAAIFVDDSEAITIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNVVVSGNDVSGSSSNNGVIYVSETVDNVEITNNLIHDNFAAVSGTDTNYAIRIGKNPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGTTD 2845
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A2E7KMP1_9PLAN (Beta_helix domain-containing protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7KMP1_9PLAN) HSP 1 Score: 329 bits (843), Expect = 3.950e-101 Identity = 168/180 (93.33%), Postives = 176/180 (97.78%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
ASN S+RFNE+RNIRSTNA+IFVDDSEAI IEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSN+VVSGN+V+GS+SNNG IYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGK PSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWG+TD
Sbjct: 2652 ASNSSIRFNEIRNIRSTNAAIFVDDSEAITIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNVVVSGNDVSGSTSNNGVIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKNPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGTTD 2831
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: UPI00119D7481 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00119D7481) HSP 1 Score: 323 bits (829), Expect = 3.020e-99 Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
ASN S+RFNEMRNIRSTNA+IFVDDSEAI IEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINN VIDSLQDGITIGRSN+VVSGN+V+GS+SNNG IYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGK PSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNW G+TD
Sbjct: 2652 ASNSSIRFNEMRNIRSTNAAIFVDDSEAITIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNAVIDSLQDGITIGRSNVVVSGNDVSGSTSNNGVIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKNPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWLGTTD 2831
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A517Q8E3_9PLAN (Beta_helix domain-containing protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q8E3_9PLAN) HSP 1 Score: 264 bits (675), Expect = 1.560e-78 Identity = 134/182 (73.63%), Postives = 157/182 (86.26%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSD--FPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
+SN S+RFNE +I STN +I+VDDSEAI IEGN L+LGHLN NDGIKVND+SG YNT TSYIINN + DS QDGIT+GRSN+VVSGNE++GS+SNNG +Y+SETVDN++ITNN IHDNLAA SGTDTNYAIRIG+ + PTNVIVRDNSIVNNDGLIFF Q++Q NLDA RNWWG++D
Sbjct: 663 SSNSSIRFNEFDHIFSTNGAIYVDDSEAITIEGNLLELGHLNLNDGIKVNDYSGIYNTTTSYIINNVINDSFQDGITVGRSNVVVSGNEISGSTSNNGVVYISETVDNIQITNNSIHDNLAADSGTDTNYAIRIGRTSTTPRVPTNVIVRDNSIVNNDGLIFFQQDTQPNLDAARNWWGTSD 844
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A518FQP1_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FQP1_9PLAN) HSP 1 Score: 263 bits (672), Expect = 3.870e-78 Identity = 133/182 (73.08%), Postives = 158/182 (86.81%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSD--FPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
+SN S+RFNE +I STN +I+VDDSEAI IEGN L+LGHLN NDGIKVND+SG YNT TSYIINN + DS QDGIT+GRSN+VVSGNE++GS+SNNG +YVSETVDN++ITNN IHDNLAA SGTDTN+AIRIG+ ++ PTNV+VRDNSIVNNDGLIFF Q++Q NLDA RNWWG++D
Sbjct: 240 SSNSSIRFNEFDHIFSTNGAIYVDDSEAITIEGNLLELGHLNLNDGIKVNDYSGIYNTTTSYIINNVIHDSYQDGITVGRSNVVVSGNEISGSTSNNGVVYVSETVDNIQITNNSIHDNLAADSGTDTNFAIRIGRTSTNPRVPTNVVVRDNSIVNNDGLIFFQQDTQPNLDAARNWWGTSD 421
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A517RCP4_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RCP4_9PLAN) HSP 1 Score: 261 bits (666), Expect = 2.550e-77 Identity = 134/182 (73.63%), Postives = 158/182 (86.81%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSD--FPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
+SN S+RFNE +I STN +IFVDDSEAI IEGN L+LGH+N NDGIKVNDF ++ TSY+INN +IDSLQDGITIGRSN+VVSGN+++GSSSNNG IYVSETVDN++ITNN IHDNLAA SGTDTNYAIRIG+ ++ PTNV+VRDNSIVNN+GLIFF Q++Q NLDALRNWWG+TD
Sbjct: 727 SSNSSIRFNEFDHIFSTNGAIFVDDSEAITIEGNLLNLGHMNANDGIKVNDFYEDAHSTTSYVINNIIIDSLQDGITIGRSNVVVSGNDISGSSSNNGVIYVSETVDNIQITNNSIHDNLAAQSGTDTNYAIRIGRTSTNPRVPTNVVVRDNSIVNNEGLIFFQQDTQPNLDALRNWWGTTD 908
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: UPI0018D6EC1B (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=UPI0018D6EC1B) HSP 1 Score: 242 bits (618), Expect = 7.270e-71 Identity = 129/180 (71.67%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
+SNG++ FNE+ NIRSTN +I+V DSEAI IEGNYLDLGHLN NDGIKV D G +T TSYIINN VIDSLQD I RSN+V+SGN+V+GSSS NG IYVSE VDN++ITNN IHDNLA+V+ NYAIRIGK SDFPTNV+VRDNSIVNN+ LIFF Q++QA LDA RNWWG+TD
Sbjct: 660 SSNGNISFNELNNIRSTNGAIYVYDSEAITIEGNYLDLGHLNLNDGIKVVDDIGA-DTTTSYIINNVVIDSLQDAINAERSNVVISGNDVSGSSSQNGVIYVSENVDNIQITNNSIHDNLASVAAGQINYAIRIGKG-SDFPTNVVVRDNSIVNNEALIFFRQDTQATLDAARNWWGTTD 837
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Match: A0A518I9M6_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I9M6_9PLAN) HSP 1 Score: 241 bits (615), Expect = 1.840e-70 Identity = 126/180 (70.00%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1 ASNGSVRFNEMRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTSYIINNTVIDSLQDGITIGRSNIVVSGNEVTGSSSNNGAIYVSETVDNVEITNNLIHDNLAAVSGTDTNYAIRIGKAPSDFPTNVIVRDNSIVNNDGLIFFAQNSQANLDALRNWWGSTD 540
+SN ++ FNE+RN+RSTN +I+V DSEAI IEGN LDL HLN NDGIKV D G +T TSYIINN VIDSLQDGIT+ RSN++VSGN+V+GS+S NG IYVSE VDNV+ITNN IHDNLA+VS NYAIRIGKA + PTNV++RDNSIVNN+ LIFF Q++QANLDA RNWWG+ D
Sbjct: 749 SSNSNISFNELRNVRSTNGAIYVYDSEAITIEGNLLDLDHLNQNDGIKVIDEIGA-DTTTSYIINNVVIDSLQDGITVERSNVIVSGNDVSGSTSENGVIYVSENVDNVQITNNSIHDNLASVSSGQINYAIRIGKAFGNHPTNVVIRDNSIVNNEALIFFQQDTQANLDASRNWWGTAD 927 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112072.2529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112072.2529.1 >prot_M-pyrifera_M_contig112072.2529.1 ID=prot_M-pyrifera_M_contig112072.2529.1|Name=mRNA_M-pyrifera_M_contig112072.2529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MRNIRSTNASIFVDDSEAIIIEGNYLDLGHLNNNDGIKVNDFSGTYNTQTback to top mRNA from alignment at M-pyrifera_M_contig112072:8..547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112072.2529.1 ID=mRNA_M-pyrifera_M_contig112072.2529.1|Name=mRNA_M-pyrifera_M_contig112072.2529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig112072:8..547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112072:8..547+ >mRNA_M-pyrifera_M_contig112072.2529.1 ID=mRNA_M-pyrifera_M_contig112072.2529.1|Name=mRNA_M-pyrifera_M_contig112072.2529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig112072:8..547+ (Macrocystis pyrifera P11B4 male)back to top |