mRNA_M-pyrifera_M_contig112063.2526.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112063.2526.1
Unique NamemRNA_M-pyrifera_M_contig112063.2526.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: I0YJB2_COCSC (MoCF_biosynth domain-containing protein (Fragment) n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YJB2_COCSC)

HSP 1 Score: 102 bits (255), Expect = 5.430e-25
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1
Query:   13 AAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVT---SIFTTGGIGPTHDDKTYEALAKAYG 264
            AAAL+IG+E+L+GSI D N P LA+ LY RGV L RVE++PDD+  I E+V +L + V    S+FT+GGIGPTHDD TYEA+A A+G
Sbjct:   11 AAALIIGNEILSGSIVDTNTPWLAKLLYSRGVDLVRVEYIPDDKADISESVLKLKQRVGPDGSVFTSGGIGPTHDDVTYEAIAAAFG 97          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A7S3EL07_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EL07_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 1.020e-24
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 1
Query:   10 SAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAY 261
            SAAAL+IGDE+L G   D N   LA+FL+ RGV LKRVE +PDD + I E+V RL  +   +FT+GGIGPTHDD TYEA+A+A+
Sbjct:   38 SAAALIIGDEILTGKTLDTNSNFLAKFLFARGVDLKRVEVIPDDMDDIGESVKRLSDTFDYVFTSGGIGPTHDDLTYEAIARAF 121          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A5J4Y0A6_9CHLO (MoCF_biosynth domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y0A6_9CHLO)

HSP 1 Score: 98.6 bits (244), Expect = 1.570e-24
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 1
Query:   13 AAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTS---IFTTGGIGPTHDDKTYEALAKAYG 264
            AAAL+IG+E+L+GSI D N P LAQ LY++GV L R E++PDD + I + V RL   V     IF++GGIGPTHDD TYEALA A+G
Sbjct:   47 AAALIIGNEILSGSITDTNTPWLAQLLYKQGVDLVRAEYIPDDIDDIKQTVLRLKERVGPDGVIFSSGGIGPTHDDVTYEALASAFG 133          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A1Q5UDE7_9EURO (MoCF_biosynth domain-containing protein n=3 Tax=Penicillium TaxID=5073 RepID=A0A1Q5UDE7_9EURO)

HSP 1 Score: 102 bits (255), Expect = 2.110e-24
Identity = 48/87 (55.17%), Postives = 62/87 (71.26%), Query Frame = 1
Query:    1 PEESAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAY 261
            P  +AA L+IGDE+L G   D N P LA+F +R G+ LKRVE +PDDEE I EAV R+      + T+GGIGPTHDD TY+++AKA+
Sbjct:   41 PIHTAACLIIGDEVLGGKTIDTNSPFLAKFCFRLGIQLKRVEVIPDDEEDIMEAVRRMSARYDFVVTSGGIGPTHDDITYQSIAKAF 127          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: K9GLC5_PEND2 (MoCF_biosynth domain-containing protein n=9 Tax=Penicillium TaxID=5073 RepID=K9GLC5_PEND2)

HSP 1 Score: 101 bits (251), Expect = 4.830e-24
Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 PEESAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAY 261
            P  +AA LVIGDE+L G   D N P LA+F +  G+ LKRVE +PDDEE I EAV R+      + T+GGIGPTHDD TY A+AKA+
Sbjct:    9 PIHTAACLVIGDEVLGGKTIDTNSPYLAKFCFSLGIELKRVEVIPDDEEDIIEAVRRMSSRYDFVVTSGGIGPTHDDITYSAIAKAF 95          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A4Y7QM44_9AGAM (Molybdopterin binding protein n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QM44_9AGAM)

HSP 1 Score: 101 bits (251), Expect = 6.010e-24
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1
Query:   10 SAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAYG 264
            +AAAL+IGDE+LNG   D N    A+F + RG+ LKR+E + DDE+ I EA  R+ ++   + TTGGIGPTHDD TYE+LAK +G
Sbjct:   35 TAAALIIGDEILNGKTVDTNSTYFARFCFERGIELKRIEVIADDEDEIIEASRRMAKNYDFVVTTGGIGPTHDDITYESLAKGFG 119          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A7S3E1Y3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E1Y3_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 6.700e-24
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 1
Query:   13 AAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTS---IFTTGGIGPTHDDKTYEALAKAYG 264
            AAAL+IG+E+LNG IAD N+P LA+ LY RG+ + R EFVPDD E I + +  L   V     +FT+GGIGPTHDD TYEA+A A+G
Sbjct:   51 AAALMIGNEILNGQIADTNLPWLAKMLYNRGIDMVRAEFVPDDTEEIAKTLQSLRSRVGENGMVFTSGGIGPTHDDVTYEAVALAFG 137          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A5B8MJV8_9CHLO (FAD synthase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJV8_9CHLO)

HSP 1 Score: 100 bits (249), Expect = 8.410e-24
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 1
Query:   13 AAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTS---IFTTGGIGPTHDDKTYEALAKAYG 264
            AAA++IGDE+L G+I+D N+P L + +Y RG+ + R EFVPD EE I EA+ R+   V     I TTGGIGPTHDDKTY ++AKA+G
Sbjct:   36 AAAVIIGDEILKGTISDVNLPFLTRMMYNRGLDMVRAEFVPDVEEEIVEALLRIKSKVGENGVIITTGGIGPTHDDKTYSSIAKAFG 122          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A8NZQ8_COPC7 (MoCF_biosynth domain-containing protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8NZQ8_COPC7)

HSP 1 Score: 102 bits (253), Expect = 8.920e-24
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1
Query:   10 SAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAYGTCV 273
            +AAAL+IGDE+LNG   D+N  V AQ+ +  G+ LKR+E +PDDE  I EA  RL      + T+GGIGPTHDD TYE++AKA+ T V
Sbjct:   55 TAAALIIGDEILNGKTRDSNSNVFAQYCFEHGIDLKRIEVIPDDENEIIEAARRLTSKYDFVVTSGGIGPTHDDITYESIAKAFNTKV 142          
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Match: A0A5C3LAY3_9AGAR (Molybdopterin binding protein n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3LAY3_9AGAR)

HSP 1 Score: 103 bits (256), Expect = 9.110e-24
Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   10 SAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEVICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAYGTCV 273
            +AAAL+IGDE+LNG   D N  V AQF +  G+ LKR+E +PDDE  I EA  RL      + ++GGIGPTHDD TYE+LAKA+ T V
Sbjct:  182 TAAALIIGDEILNGKTRDTNSNVFAQFCFEHGIDLKRIEVIPDDETEIIEAARRLSSKFDLVVSSGGIGPTHDDITYESLAKAFNTTV 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112063.2526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I0YJB2_COCSC5.430e-2559.77MoCF_biosynth domain-containing protein (Fragment)... [more]
A0A7S3EL07_9RHOD1.020e-2459.52Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Y0A6_9CHLO1.570e-2458.62MoCF_biosynth domain-containing protein n=1 Tax=Tr... [more]
A0A1Q5UDE7_9EURO2.110e-2455.17MoCF_biosynth domain-containing protein n=3 Tax=Pe... [more]
K9GLC5_PEND24.830e-2456.32MoCF_biosynth domain-containing protein n=9 Tax=Pe... [more]
A0A4Y7QM44_9AGAM6.010e-2454.12Molybdopterin binding protein n=1 Tax=Rickenella m... [more]
A0A7S3E1Y3_9CHLO6.700e-2457.47Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A5B8MJV8_9CHLO8.410e-2456.32FAD synthase n=1 Tax=Chloropicon primus TaxID=1764... [more]
A8NZQ8_COPC78.920e-2454.55MoCF_biosynth domain-containing protein n=1 Tax=Co... [more]
A0A5C3LAY3_9AGAR9.110e-2455.68Molybdopterin binding protein n=1 Tax=Coprinopsis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112063contigM-pyrifera_M_contig112063:3..275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score104.0
Seed ortholog evalue3.8e-20
Seed eggNOG ortholog248742.XP_005643025.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Probable molybdopterin binding domain
EggNOG OGs34JUR@3041,37Z5D@33090,COG0175@1,KOG2644@2759
COG Functional cat.EH
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size273
Cds size273
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815634.239832-CDS-M-pyrifera_M_contig112063:2..2751622815634.239832-CDS-M-pyrifera_M_contig112063:2..275Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112063 3..275 -
1692277497.5683608-CDS-M-pyrifera_M_contig112063:2..2751692277497.5683608-CDS-M-pyrifera_M_contig112063:2..275Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112063 3..275 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112063.2526.1prot_M-pyrifera_M_contig112063.2526.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112063 3..275 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112063.2526.1

>prot_M-pyrifera_M_contig112063.2526.1 ID=prot_M-pyrifera_M_contig112063.2526.1|Name=mRNA_M-pyrifera_M_contig112063.2526.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp
PEESAAALVIGDELLNGSIADANVPVLAQFLYRRGVPLKRVEFVPDDEEV
ICEAVHRLGRSVTSIFTTGGIGPTHDDKTYEALAKAYGTCV
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mRNA from alignment at M-pyrifera_M_contig112063:3..275-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112063.2526.1 ID=mRNA_M-pyrifera_M_contig112063.2526.1|Name=mRNA_M-pyrifera_M_contig112063.2526.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=273bp|location=Sequence derived from alignment at M-pyrifera_M_contig112063:3..275- (Macrocystis pyrifera P11B4 male)
CCAGAAGAGTCAGCAGCAGCTTTGGTGATTGGAGACGAGCTGCTGAATGG CAGCATTGCCGACGCCAATGTGCCAGTCTTGGCTCAGTTCCTCTACCGAA GGGGTGTGCCACTGAAGCGTGTTGAATTCGTGCCCGACGATGAGGAGGTC ATCTGCGAAGCTGTGCACCGTCTTGGCCGGTCAGTAACTTCCATCTTCAC TACTGGTGGCATCGGCCCTACGCACGATGACAAGACGTACGAGGCACTTG CCAAAGCCTACGGCACATGCGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig112063:3..275-

>mRNA_M-pyrifera_M_contig112063.2526.1 ID=mRNA_M-pyrifera_M_contig112063.2526.1|Name=mRNA_M-pyrifera_M_contig112063.2526.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig112063:3..275- (Macrocystis pyrifera P11B4 male)
CCAGAAGAGTCAGCAGCAGCTTTGGTGATTGGAGACGAGCTGCTGAATGG
CAGCATTGCCGACGCCAATGTGCCAGTCTTGGCTCAGTTCCTCTACCGAA
GGGGTGTGCCACTGAAGCGTGTTGAATTCGTGCCCGACGATGAGGAGGTC
ATCTGCGAAGCTGTGCACCGTCTTGGCCGGTCAGTAACTTCCATCTTCAC
TACTGGTGGCATCGGCCCTACGCACGATGACAAGACGTACGAGGCACTTG
CCAAAGCCTACGGCACATGCGTGCCAGAAGAGTCAGCAGCAGCTTTGGTG
ATTGGAGACGAGCTGCTGAATGGCAGCATTGCCGACGCCAATGTGCCAGT
CTTGGCTCAGTTCCTCTACCGAAGGGGTGTGCCACTGAAGCGTGTTGAAT
TCGTGCCCGACGATGAGGAGGTCATCTGCGAAGCTGTGCACCGTCTTGGC
CGGTCAGTAACTTCCATCTTCACTACTGGTGGCATCGGCCCTACGCACGA
TGACAAGACGTACGAGGCACTTGCCAAAGCCTACGGCACATGCGTG
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